RNA–Protein interactions for RNA: ENST00000494054.1

UFD1-210, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-210ENST00000494054 KLRG1Q96E93 195 aa12.59□□□□□ -0.39
UFD1-210ENST00000494054 RTFDC1Q9BY42 306 aaPredicted RBP12.59□□□□□ -0.39
UFD1-210ENST00000494054 TMX4Q9H1E5 349 aaPredicted RBP12.59□□□□□ -0.39
UFD1-210ENST00000494054 HACL1Q9UJ83 578 aa12.59□□□□□ -0.39
UFD1-210ENST00000494054 GJA3Q9Y6H8 435 aa12.59□□□□□ -0.39
UFD1-210ENST00000494054 IL16Q14005 1332 aa12.59□□□□□ -0.39
UFD1-210ENST00000494054 SCN4AP35499 1836 aa12.58□□□□□ -0.4
UFD1-210ENST00000494054 EPHX2P34913 555 aa12.58□□□□□ -0.4
UFD1-210ENST00000494054 TWISTNBQ3B726 338 aaPredicted RBP12.58□□□□□ -0.4
UFD1-210ENST00000494054 EAPPQ56P03 285 aaPredicted RBP12.58□□□□□ -0.4
UFD1-210ENST00000494054 DPP8Q6V1X1 898 aaPredicted RBP12.58□□□□□ -0.4
UFD1-210ENST00000494054 G2E3Q7L622 706 aa12.58□□□□□ -0.4
UFD1-210ENST00000494054 METTL22Q9BUU2 404 aaPredicted RBP12.58□□□□□ -0.4
UFD1-210ENST00000494054 LDHDQ86WU2 507 aa12.57□□□□□ -0.4
UFD1-210ENST00000494054 NIM1KQ8IY84 436 aa12.57□□□□□ -0.4
UFD1-210ENST00000494054 ZBTB38Q8NAP3 1195 aaPredicted RBP12.57□□□□□ -0.4
UFD1-210ENST00000494054 CCDC191Q8NCU4 936 aa12.57□□□□□ -0.4
UFD1-210ENST00000494054 CHMP4AQ9BY43 222 aa12.57□□□□□ -0.4
UFD1-210ENST00000494054 VPS33BQ9H267 617 aa12.57□□□□□ -0.4
UFD1-210ENST00000494054 MAP3K2Q9Y2U5 619 aa12.57□□□□□ -0.4
UFD1-210ENST00000494054 PI4KAP2A4QPH2 592 aa12.56□□□□□ -0.4
UFD1-210ENST00000494054 DDX58O95786 925 aaKnown RBP12.56□□□□□ -0.4
UFD1-210ENST00000494054 ITGBL1O95965 494 aaPredicted RBP12.56□□□□□ -0.4
UFD1-210ENST00000494054 SLC4A2P04920 1241 aa12.56□□□□□ -0.4
UFD1-210ENST00000494054 PCCAP05165 728 aaPredicted RBP12.56□□□□□ -0.4
UFD1-210ENST00000494054 IGKV5-2P06315 115 aa12.56□□□□□ -0.4
UFD1-210ENST00000494054 SCNN1DP51172 638 aa12.56□□□□□ -0.4
UFD1-210ENST00000494054 KIAA2012Q0VF49 1180 aa12.56□□□□□ -0.4
UFD1-210ENST00000494054 KSR2Q6VAB6 950 aa12.56□□□□□ -0.4
UFD1-210ENST00000494054 TMC4Q7Z404 712 aa12.56□□□□□ -0.4
UFD1-210ENST00000494054 WDR63Q8IWG1 891 aa12.56□□□□□ -0.4
UFD1-210ENST00000494054 FAM9BQ8IZU0 186 aa12.56□□□□□ -0.4
UFD1-210ENST00000494054 PI4KAP1Q8N8J0 262 aa12.56□□□□□ -0.4
UFD1-210ENST00000494054 JMYQ8N9B5 988 aa12.56□□□□□ -0.4
UFD1-210ENST00000494054 SUPT20HQ8NEM7 779 aa12.56□□□□□ -0.4
UFD1-210ENST00000494054 SPINK5Q9NQ38 1064 aaPredicted RBP12.56□□□□□ -0.4
UFD1-210ENST00000494054 SEC31BQ9NQW1 1179 aa12.56□□□□□ -0.4
UFD1-210ENST00000494054 CWC25Q9NXE8 425 aaPredicted RBP12.56□□□□□ -0.4
UFD1-210ENST00000494054 ZNRF3Q9ULT6 936 aa12.56□□□□□ -0.4
UFD1-210ENST00000494054 CLEC11AQ9Y240 323 aa12.56□□□□□ -0.4
UFD1-210ENST00000494054 LTBP1Q14766 1721 aa12.56□□□□□ -0.4
UFD1-210ENST00000494054 FANCIQ9NVI1 1328 aa12.56□□□□□ -0.4
UFD1-210ENST00000494054 EPS15P42566 896 aa12.55□□□□□ -0.4
UFD1-210ENST00000494054 CXCL9Q07325 125 aa12.55□□□□□ -0.4
UFD1-210ENST00000494054 STK31Q9BXU1 1019 aa12.55□□□□□ -0.4
UFD1-210ENST00000494054 NSFL1CQ9UNZ2 370 aaKnown RBP12.55□□□□□ -0.4
UFD1-210ENST00000494054 PASKQ96RG2 1323 aa12.55□□□□□ -0.4
UFD1-210ENST00000494054 DUOX1Q9NRD9 1551 aa12.55□□□□□ -0.4
UFD1-210ENST00000494054 ADAMTSL1Q8N6G6 1762 aa12.54□□□□□ -0.4
UFD1-210ENST00000494054 VAMP4O75379 141 aa12.54□□□□□ -0.4
UFD1-210ENST00000494054 RPS8P62241 208 aaKnown RBP12.54□□□□□ -0.4
UFD1-210ENST00000494054 GPSM2P81274 684 aa12.54□□□□□ -0.4
UFD1-210ENST00000494054 EXOSC9Q06265 439 aaKnown RBP12.54□□□□□ -0.4
UFD1-210ENST00000494054 MAP1SQ66K74 1059 aaPredicted RBP12.54□□□□□ -0.4
UFD1-210ENST00000494054 PNMA8AQ86V59 439 aaPredicted RBP12.54□□□□□ -0.4
UFD1-210ENST00000494054 CCDC85AQ96PX6 553 aaPredicted RBP12.54□□□□□ -0.4
UFD1-210ENST00000494054 LRRC37AA6NMS7 1700 aa12.54□□□□□ -0.4
UFD1-210ENST00000494054 YDJCA8MPS7 323 aa12.53□□□□□ -0.4
UFD1-210ENST00000494054 PDE8AO60658 829 aa12.53□□□□□ -0.4
UFD1-210ENST00000494054 LMOD1P29536 600 aaPredicted RBP12.53□□□□□ -0.4
UFD1-210ENST00000494054 CWF19L2Q2TBE0 894 aaKnown RBP12.53□□□□□ -0.4
UFD1-210ENST00000494054 GPR101Q96P66 508 aaPredicted RBP12.53□□□□□ -0.4
UFD1-210ENST00000494054 POLLQ9UGP5 575 aa12.53□□□□□ -0.4
UFD1-210ENST00000494054 NEURL1BA8MQ27 555 aa12.52□□□□□ -0.41
UFD1-210ENST00000494054 RIMBP2O15034 1052 aa12.52□□□□□ -0.41
UFD1-210ENST00000494054 RAD17O75943 681 aa12.52□□□□□ -0.41
UFD1-210ENST00000494054 FLIIQ13045 1269 aa12.52□□□□□ -0.41
UFD1-210ENST00000494054 CCDC152Q4G0S7 254 aa12.52□□□□□ -0.41
UFD1-210ENST00000494054 CIAPIN1Q6FI81 312 aa12.52□□□□□ -0.41
UFD1-210ENST00000494054 CNTROBQ8N137 903 aa12.52□□□□□ -0.41
UFD1-210ENST00000494054 CREBZFQ9NS37 354 aa12.52□□□□□ -0.41
UFD1-210ENST00000494054 CDHR2Q9BYE9 1310 aa12.52□□□□□ -0.41
UFD1-210ENST00000494054 C6orf229H3BNL8 230 aa12.51□□□□□ -0.41
UFD1-210ENST00000494054 HSP90B1P14625 803 aaKnown RBP12.51□□□□□ -0.41
UFD1-210ENST00000494054 GMPSP49915 693 aaPredicted RBP12.51□□□□□ -0.41
UFD1-210ENST00000494054 NEXNQ0ZGT2 675 aa12.51□□□□□ -0.41
UFD1-210ENST00000494054 WASHC4Q2M389 1173 aa12.51□□□□□ -0.41
UFD1-210ENST00000494054 TBC1D16Q8TBP0 767 aa12.51□□□□□ -0.41
UFD1-210ENST00000494054 GPRC5DQ9NZD1 345 aa12.51□□□□□ -0.41
UFD1-210ENST00000494054 MKRN1Q9UHC7 482 aaKnown RBP12.51□□□□□ -0.41
UFD1-210ENST00000494054 H7C1W4 665 aa12.5□□□□□ -0.41
UFD1-210ENST00000494054 FMR1Q06787 632 aaKnown RBP eCLIP12.5□□□□□ -0.41
UFD1-210ENST00000494054 DOK7Q18PE1 504 aa12.5□□□□□ -0.41
UFD1-210ENST00000494054 USP50Q70EL3 339 aaPredicted RBP12.5□□□□□ -0.41
UFD1-210ENST00000494054 DBNDD1Q9H9R9 158 aa12.5□□□□□ -0.41
UFD1-210ENST00000494054 KCNQ5Q9NR82 932 aa12.5□□□□□ -0.41
UFD1-210ENST00000494054 SHTN1A0MZ66 631 aa12.49□□□□□ -0.41
UFD1-210ENST00000494054 TMEM88BA6NKF7 163 aa12.49□□□□□ -0.41
UFD1-210ENST00000494054 CTSWP56202 376 aa12.49□□□□□ -0.41
UFD1-210ENST00000494054 FKBP5Q13451 457 aaPredicted RBP12.49□□□□□ -0.41
UFD1-210ENST00000494054 TNIP1Q15025 636 aa12.49□□□□□ -0.41
UFD1-210ENST00000494054 TTLL11Q8NHH1 800 aa12.49□□□□□ -0.41
UFD1-210ENST00000494054 DNAAF4Q8WXU2 420 aa12.49□□□□□ -0.41
UFD1-210ENST00000494054 BCL2L13Q9BXK5 485 aa12.49□□□□□ -0.41
UFD1-210ENST00000494054 ADARB2Q9NS39 739 aaKnown RBP12.49□□□□□ -0.41
UFD1-210ENST00000494054 PODXL2Q9NZ53 605 aa12.49□□□□□ -0.41
UFD1-210ENST00000494054 ZBTB12Q9Y330 459 aaPredicted RBP12.49□□□□□ -0.41
UFD1-210ENST00000494054 WTIPA6NIX2 430 aaPredicted RBP12.48□□□□□ -0.41
UFD1-210ENST00000494054 PSMD14O00487 310 aa12.48□□□□□ -0.41
UFD1-210ENST00000494054 HIRAP54198 1017 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms