RNA–Protein interactions for RNA: ENST00000493726.1

LRCH3-218, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 733 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-218ENST00000493726 POU4F2Q12837 409 aa11.09□□□□□ -0.63
LRCH3-218ENST00000493726 WAPLQ7Z5K2 1190 aa11.09□□□□□ -0.63
LRCH3-218ENST00000493726 LRRC59Q96AG4 307 aaKnown RBP11.09□□□□□ -0.63
LRCH3-218ENST00000493726 USP32Q8NFA0 1604 aa11.09□□□□□ -0.63
LRCH3-218ENST00000493726 GPC1P35052 558 aa11.08□□□□□ -0.64
LRCH3-218ENST00000493726 CLN3Q13286 438 aa11.08□□□□□ -0.64
LRCH3-218ENST00000493726 ORAI2Q96SN7 254 aa11.08□□□□□ -0.64
LRCH3-218ENST00000493726 ANKARQ7Z5J8 1434 aa11.08□□□□□ -0.64
LRCH3-218ENST00000493726 ARHGEF28Q8N1W1 1705 aaKnown RBP11.07□□□□□ -0.64
LRCH3-218ENST00000493726 STAU1O95793 577 aaKnown RBP11.07□□□□□ -0.64
LRCH3-218ENST00000493726 PHTF2Q8N3S3 785 aa11.07□□□□□ -0.64
LRCH3-218ENST00000493726 MYCP01106 439 aaPredicted RBP11.06□□□□□ -0.64
LRCH3-218ENST00000493726 IL2RAP01589 272 aa11.06□□□□□ -0.64
LRCH3-218ENST00000493726 SLFNL1Q499Z3 407 aa11.06□□□□□ -0.64
LRCH3-218ENST00000493726 GRIP2Q9C0E4 1043 aa11.06□□□□□ -0.64
LRCH3-218ENST00000493726 DOLKQ9UPQ8 538 aa11.06□□□□□ -0.64
LRCH3-218ENST00000493726 OXLD1Q5BKU9 147 aa11.05□□□□□ -0.64
LRCH3-218ENST00000493726 RIPOR1Q6ZS17 1223 aa11.05□□□□□ -0.64
LRCH3-218ENST00000493726 RNF135Q8IUD6 432 aa11.05□□□□□ -0.64
LRCH3-218ENST00000493726 DCAF11Q8TEB1 546 aa11.05□□□□□ -0.64
LRCH3-218ENST00000493726 CNKSR1Q969H4 720 aa11.05□□□□□ -0.64
LRCH3-218ENST00000493726 NPHP3Q7Z494 1330 aa11.05□□□□□ -0.64
LRCH3-218ENST00000493726 GAS2L1Q99501 681 aaPredicted RBP11.04□□□□□ -0.64
LRCH3-218ENST00000493726 STK26Q9P289 416 aa11.04□□□□□ -0.64
LRCH3-218ENST00000493726 CDK12Q9NYV4 1490 aaPredicted RBP11.04□□□□□ -0.64
LRCH3-218ENST00000493726 TULP4Q9NRJ4 1543 aa11.04□□□□□ -0.64
LRCH3-218ENST00000493726 GNRH1P01148 92 aa11.03□□□□□ -0.64
LRCH3-218ENST00000493726 NBPF10Q6P3W6 841 aaKnown RBP11.03□□□□□ -0.64
LRCH3-218ENST00000493726 NBPF15Q8N660 670 aa11.03□□□□□ -0.64
LRCH3-218ENST00000493726 DDX17Q92841 729 aaKnown RBP11.03□□□□□ -0.64
LRCH3-218ENST00000493726 PRAM1Q96QH2 718 aa11.03□□□□□ -0.64
LRCH3-218ENST00000493726 COG6Q9Y2V7 657 aa11.03□□□□□ -0.64
LRCH3-218ENST00000493726 RGPD8O14715 1765 aaPredicted RBP11.03□□□□□ -0.64
LRCH3-218ENST00000493726 GPR25O00155 361 aa11.02□□□□□ -0.65
LRCH3-218ENST00000493726 CENPCQ03188 943 aa11.02□□□□□ -0.65
LRCH3-218ENST00000493726 DBN1Q16643 649 aa11.02□□□□□ -0.65
LRCH3-218ENST00000493726 WHAMMQ8TF30 809 aa11.02□□□□□ -0.65
LRCH3-218ENST00000493726 ZNF837Q96EG3 531 aaPredicted RBP11.02□□□□□ -0.65
LRCH3-218ENST00000493726 ESYT1Q9BSJ8 1104 aa11.02□□□□□ -0.65
LRCH3-218ENST00000493726 TRPM3Q9HCF6 1732 aaPredicted RBP11.01□□□□□ -0.65
LRCH3-218ENST00000493726 MARF1Q9Y4F3 1742 aaKnown RBP11.01□□□□□ -0.65
LRCH3-218ENST00000493726 POM121Q96HA1 1249 aa11.01□□□□□ -0.65
LRCH3-218ENST00000493726 SBNO1A3KN83 1393 aa11.01□□□□□ -0.65
LRCH3-218ENST00000493726 EIF3AQ14152 1382 aaKnown RBP11.01□□□□□ -0.65
LRCH3-218ENST00000493726 ATP7BP35670 1465 aa11□□□□□ -0.65
LRCH3-218ENST00000493726 TRPM1Q7Z4N2 1603 aa11□□□□□ -0.65
LRCH3-218ENST00000493726 PHKA2P46019 1235 aa11□□□□□ -0.65
LRCH3-218ENST00000493726 GAS6Q14393 721 aa11□□□□□ -0.65
LRCH3-218ENST00000493726 WASHC4Q2M389 1173 aa11□□□□□ -0.65
LRCH3-218ENST00000493726 ESCO1Q5FWF5 840 aa11□□□□□ -0.65
LRCH3-218ENST00000493726 ZNF772Q68DY9 489 aaPredicted RBP11□□□□□ -0.65
LRCH3-218ENST00000493726 FNBP4Q8N3X1 1017 aaPredicted RBP11□□□□□ -0.65
LRCH3-218ENST00000493726 DYRK1BQ9Y463 629 aa11□□□□□ -0.65
LRCH3-218ENST00000493726 TOPAZ1Q8N9V7 1692 aa11□□□□□ -0.65
LRCH3-218ENST00000493726 SPATA31A3Q5VYP0 1347 aa11□□□□□ -0.65
LRCH3-218ENST00000493726 ALS2Q96Q42 1657 aa10.99□□□□□ -0.65
LRCH3-218ENST00000493726 SPATA31C2B4DYI2 1134 aa10.99□□□□□ -0.65
LRCH3-218ENST00000493726 WASLO00401 505 aaPredicted RBP10.99□□□□□ -0.65
LRCH3-218ENST00000493726 USP4Q13107 963 aa10.99□□□□□ -0.65
LRCH3-218ENST00000493726 SEMA3FQ13275 785 aa10.99□□□□□ -0.65
LRCH3-218ENST00000493726 ZNF385CQ66K41 422 aaPredicted RBP10.99□□□□□ -0.65
LRCH3-218ENST00000493726 TAS1R3Q7RTX0 852 aa10.99□□□□□ -0.65
LRCH3-218ENST00000493726 TRIM22Q8IYM9 498 aa10.99□□□□□ -0.65
LRCH3-218ENST00000493726 TIMMDC1Q9NPL8 285 aa10.99□□□□□ -0.65
LRCH3-218ENST00000493726 PRR36Q9H6K5 1346 aa10.99□□□□□ -0.65
LRCH3-218ENST00000493726 EP400Q96L91 3159 aa10.99□□□□□ -0.65
LRCH3-218ENST00000493726 ABCA3Q99758 1704 aa10.98□□□□□ -0.65
LRCH3-218ENST00000493726 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.98□□□□□ -0.65
LRCH3-218ENST00000493726 CRYBG1Q9Y4K1 1723 aa10.98□□□□□ -0.65
LRCH3-218ENST00000493726 FOXO3O43524 673 aa10.98□□□□□ -0.65
LRCH3-218ENST00000493726 SVOPQ8N4V2 548 aa10.98□□□□□ -0.65
LRCH3-218ENST00000493726 XAGE2Q96GT9 111 aa10.98□□□□□ -0.65
LRCH3-218ENST00000493726 ZSCAN10Q96SZ4 725 aaPredicted RBP10.98□□□□□ -0.65
LRCH3-218ENST00000493726 ETNK1Q9HBU6 452 aa10.98□□□□□ -0.65
LRCH3-218ENST00000493726 TRAK1Q9UPV9 953 aa10.98□□□□□ -0.65
LRCH3-218ENST00000493726 HRH3Q9Y5N1 445 aa10.98□□□□□ -0.65
LRCH3-218ENST00000493726 GPRASP1Q5JY77 1395 aa10.98□□□□□ -0.65
LRCH3-218ENST00000493726 TNS3Q68CZ2 1445 aa10.98□□□□□ -0.65
LRCH3-218ENST00000493726 ITSN1Q15811 1721 aa10.98□□□□□ -0.65
LRCH3-218ENST00000493726 PIK3CDO00329 1044 aa10.97□□□□□ -0.65
LRCH3-218ENST00000493726 L3MBTL2Q969R5 705 aa10.97□□□□□ -0.65
LRCH3-218ENST00000493726 GTPBP3Q969Y2 492 aaKnown RBP10.97□□□□□ -0.65
LRCH3-218ENST00000493726 SLIT2O94813 1529 aa10.96□□□□□ -0.65
LRCH3-218ENST00000493726 BCL9LQ86UU0 1499 aa10.96□□□□□ -0.65
LRCH3-218ENST00000493726 POLR3AO14802 1390 aaPredicted RBP10.96□□□□□ -0.65
LRCH3-218ENST00000493726 AFF2P51816 1311 aa10.96□□□□□ -0.65
LRCH3-218ENST00000493726 SLURP2P0DP57 97 aa10.96□□□□□ -0.65
LRCH3-218ENST00000493726 NBPF1Q3BBV0 1214 aa10.96□□□□□ -0.65
LRCH3-218ENST00000493726 PLPP7Q8NBV4 271 aa10.96□□□□□ -0.65
LRCH3-218ENST00000493726 FHDC1Q9C0D6 1143 aaPredicted RBP10.96□□□□□ -0.65
LRCH3-218ENST00000493726 GPAMQ9HCL2 828 aa10.96□□□□□ -0.65
LRCH3-218ENST00000493726 ATRNO75882 1429 aa10.95□□□□□ -0.66
LRCH3-218ENST00000493726 ADAMTS2O95450 1211 aa10.95□□□□□ -0.66
LRCH3-218ENST00000493726 POGKQ9P215 609 aa10.95□□□□□ -0.66
LRCH3-218ENST00000493726 ARHGEF10O15013 1369 aa10.94□□□□□ -0.66
LRCH3-218ENST00000493726 MEX3CQ5U5Q3 659 aaKnown RBP10.94□□□□□ -0.66
LRCH3-218ENST00000493726 TMEM214Q6NUQ4 689 aaKnown RBP10.94□□□□□ -0.66
LRCH3-218ENST00000493726 KRT28Q7Z3Y7 464 aa10.94□□□□□ -0.66
LRCH3-218ENST00000493726 ADAMTS8Q9UP79 889 aa10.94□□□□□ -0.66
LRCH3-218ENST00000493726 NWD2Q9ULI1 1742 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms