RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 ATP6V0A2Q9Y487 856 aa8.89□□□□□ -0.99
TOP3A-207ENST00000493648 GOLGB1Q14789 3259 aaKnown RBP8.88□□□□□ -0.99
TOP3A-207ENST00000493648 GLTPD2A6NH11 291 aa8.88□□□□□ -0.99
TOP3A-207ENST00000493648 NEURL1BA8MQ27 555 aa8.88□□□□□ -0.99
TOP3A-207ENST00000493648 IGKV5-2P06315 115 aa8.88□□□□□ -0.99
TOP3A-207ENST00000493648 GRAPQ13588 217 aa8.88□□□□□ -0.99
TOP3A-207ENST00000493648 CWF19L2Q2TBE0 894 aaKnown RBP8.88□□□□□ -0.99
TOP3A-207ENST00000493648 TRMT2AQ8IZ69 625 aaKnown RBP8.88□□□□□ -0.99
TOP3A-207ENST00000493648 LINS1Q8NG48 757 aa8.88□□□□□ -0.99
TOP3A-207ENST00000493648 GRAPLQ8TC17 118 aaPredicted RBP8.88□□□□□ -0.99
TOP3A-207ENST00000493648 JARID2Q92833 1246 aaPredicted RBP8.88□□□□□ -0.99
TOP3A-207ENST00000493648 PSMD1Q99460 953 aa8.88□□□□□ -0.99
TOP3A-207ENST00000493648 ZNF277Q9NRM2 450 aaPredicted RBP8.88□□□□□ -0.99
TOP3A-207ENST00000493648 CDHR2Q9BYE9 1310 aa8.87□□□□□ -0.99
TOP3A-207ENST00000493648 LAMB2P55268 1798 aa8.87□□□□□ -0.99
TOP3A-207ENST00000493648 H7C1W4 665 aa8.87□□□□□ -0.99
TOP3A-207ENST00000493648 CT47B1P0C2W7 299 aaPredicted RBP8.87□□□□□ -0.99
TOP3A-207ENST00000493648 IARSP41252 1262 aaKnown RBP8.87□□□□□ -0.99
TOP3A-207ENST00000493648 C1QTNF8P60827 252 aa8.87□□□□□ -0.99
TOP3A-207ENST00000493648 RPS8P62241 208 aaKnown RBP8.87□□□□□ -0.99
TOP3A-207ENST00000493648 GCKRQ14397 625 aa8.87□□□□□ -0.99
TOP3A-207ENST00000493648 CCDC152Q4G0S7 254 aa8.87□□□□□ -0.99
TOP3A-207ENST00000493648 C16orf71Q8IYS4 520 aaPredicted RBP8.87□□□□□ -0.99
TOP3A-207ENST00000493648 MPNDQ8N594 471 aa8.87□□□□□ -0.99
TOP3A-207ENST00000493648 SUPT20HQ8NEM7 779 aa8.87□□□□□ -0.99
TOP3A-207ENST00000493648 JDP2Q8WYK2 163 aa8.87□□□□□ -0.99
TOP3A-207ENST00000493648 VPS33BQ9H267 617 aa8.87□□□□□ -0.99
TOP3A-207ENST00000493648 RRAGCQ9HB90 399 aa8.87□□□□□ -0.99
TOP3A-207ENST00000493648 DICER1Q9UPY3 1922 aaKnown RBP8.87□□□□□ -0.99
TOP3A-207ENST00000493648 UTRNP46939 3433 aa8.87□□□□□ -0.99
TOP3A-207ENST00000493648 DDX60Q8IY21 1712 aaKnown RBP8.86□□□□□ -0.99
TOP3A-207ENST00000493648 F6X3S4 739 aa8.86□□□□□ -0.99
TOP3A-207ENST00000493648 ABCB7O75027 752 aa8.86□□□□□ -0.99
TOP3A-207ENST00000493648 HNRNPUQ00839 825 aaKnown RBP eCLIP8.86□□□□□ -0.99
TOP3A-207ENST00000493648 ALDH1L2Q3SY69 923 aa8.86□□□□□ -0.99
TOP3A-207ENST00000493648 BEND3Q5T5X7 828 aa8.86□□□□□ -0.99
TOP3A-207ENST00000493648 DPP8Q6V1X1 898 aaPredicted RBP8.86□□□□□ -0.99
TOP3A-207ENST00000493648 UBE3BQ7Z3V4 1068 aa8.86□□□□□ -0.99
TOP3A-207ENST00000493648 MRPL50Q8N5N7 158 aaKnown RBP8.86□□□□□ -0.99
TOP3A-207ENST00000493648 SSH1Q8WYL5 1049 aa8.86□□□□□ -0.99
TOP3A-207ENST00000493648 NMRK2Q9NPI5 230 aa8.86□□□□□ -0.99
TOP3A-207ENST00000493648 PTPRCP08575 1304 aa8.85□□□□□ -0.99
TOP3A-207ENST00000493648 KIF3CO14782 793 aa8.85□□□□□ -0.99
TOP3A-207ENST00000493648 ALDH1L1O75891 902 aa8.85□□□□□ -0.99
TOP3A-207ENST00000493648 TOMM70O94826 608 aa8.85□□□□□ -0.99
TOP3A-207ENST00000493648 SLC4A10Q6U841 1118 aa8.85□□□□□ -0.99
TOP3A-207ENST00000493648 LARGE2Q8N3Y3 721 aa8.85□□□□□ -0.99
TOP3A-207ENST00000493648 TTLL11Q8NHH1 800 aa8.85□□□□□ -0.99
TOP3A-207ENST00000493648 CELF1Q92879 486 aaKnown RBP8.85□□□□□ -0.99
TOP3A-207ENST00000493648 CCDC85AQ96PX6 553 aaPredicted RBP8.85□□□□□ -0.99
TOP3A-207ENST00000493648 RTFDC1Q9BY42 306 aaPredicted RBP8.85□□□□□ -0.99
TOP3A-207ENST00000493648 SRCIN1Q9C0H9 1055 aa8.85□□□□□ -0.99
TOP3A-207ENST00000493648 C9orf78Q9NZ63 289 aaPredicted RBP8.85□□□□□ -0.99
TOP3A-207ENST00000493648 TAF1P21675 1872 aa8.85□□□□□ -0.99
TOP3A-207ENST00000493648 PPIP5K2O43314 1243 aa8.84□□□□□ -0.99
TOP3A-207ENST00000493648 VEGFAP15692 232 aaPredicted RBP8.84□□□□□ -0.99
TOP3A-207ENST00000493648 CTSWP56202 376 aa8.84□□□□□ -0.99
TOP3A-207ENST00000493648 EIF6P56537 245 aaKnown RBP8.84□□□□□ -0.99
TOP3A-207ENST00000493648 ANKRD18AQ8IVF6 992 aa8.84□□□□□ -0.99
TOP3A-207ENST00000493648 CDC5LQ99459 802 aaKnown RBP8.84□□□□□ -0.99
TOP3A-207ENST00000493648 PLA2G12BQ9BX93 195 aa8.84□□□□□ -0.99
TOP3A-207ENST00000493648 SEC31BQ9NQW1 1179 aa8.84□□□□□ -0.99
TOP3A-207ENST00000493648 SMC4Q9NTJ3 1288 aa8.84□□□□□ -0.99
TOP3A-207ENST00000493648 NSFL1CQ9UNZ2 370 aaKnown RBP8.84□□□□□ -0.99
TOP3A-207ENST00000493648 TIAM2Q8IVF5 1701 aa8.83□□□□□ -1
TOP3A-207ENST00000493648 FZD9O00144 591 aa8.83□□□□□ -1
TOP3A-207ENST00000493648 GRM8O00222 908 aa8.83□□□□□ -1
TOP3A-207ENST00000493648 DDNO94850 711 aaPredicted RBP8.83□□□□□ -1
TOP3A-207ENST00000493648 NIM1KQ8IY84 436 aa8.83□□□□□ -1
TOP3A-207ENST00000493648 BCL2L13Q9BXK5 485 aa8.83□□□□□ -1
TOP3A-207ENST00000493648 ANKIB1Q9P2G1 1089 aa8.83□□□□□ -1
TOP3A-207ENST00000493648 MYH3P11055 1940 aa8.82□□□□□ -1
TOP3A-207ENST00000493648 SNED1Q8TER0 1413 aa8.82□□□□□ -1
TOP3A-207ENST00000493648 IQCA1LA6NCM1 817 aa8.82□□□□□ -1
TOP3A-207ENST00000493648 C6orf229H3BNL8 230 aa8.82□□□□□ -1
TOP3A-207ENST00000493648 CSF1RP07333 972 aa8.82□□□□□ -1
TOP3A-207ENST00000493648 IGHMBP2P38935 993 aaKnown RBP8.82□□□□□ -1
TOP3A-207ENST00000493648 CASP7P55210 303 aa8.82□□□□□ -1
TOP3A-207ENST00000493648 GPSM2P81274 684 aa8.82□□□□□ -1
TOP3A-207ENST00000493648 AOC3Q16853 763 aa8.82□□□□□ -1
TOP3A-207ENST00000493648 WASHC4Q2M389 1173 aa8.82□□□□□ -1
TOP3A-207ENST00000493648 GPC2Q8N158 579 aa8.82□□□□□ -1
TOP3A-207ENST00000493648 RBM46Q8TBY0 533 aaKnown RBP8.82□□□□□ -1
TOP3A-207ENST00000493648 EYA3Q99504 573 aa8.82□□□□□ -1
TOP3A-207ENST00000493648 ZC3H12CQ9C0D7 883 aaKnown RBP8.82□□□□□ -1
TOP3A-207ENST00000493648 GREM2Q9H772 168 aa8.82□□□□□ -1
TOP3A-207ENST00000493648 BSDC1Q9NW68 430 aaPredicted RBP8.82□□□□□ -1
TOP3A-207ENST00000493648 ZNRF3Q9ULT6 936 aa8.82□□□□□ -1
TOP3A-207ENST00000493648 NOB1Q9ULX3 412 aaKnown RBP8.82□□□□□ -1
TOP3A-207ENST00000493648 ANKRD18BA2A2Z9 1011 aa8.81□□□□□ -1
TOP3A-207ENST00000493648 G3V3G9 751 aa8.81□□□□□ -1
TOP3A-207ENST00000493648 ITGA6P23229 1130 aa8.81□□□□□ -1
TOP3A-207ENST00000493648 RARSP54136 660 aaKnown RBP8.81□□□□□ -1
TOP3A-207ENST00000493648 BRPF1P55201 1214 aaPredicted RBP8.81□□□□□ -1
TOP3A-207ENST00000493648 FOXO4P98177 505 aa8.81□□□□□ -1
TOP3A-207ENST00000493648 KIAA2012Q0VF49 1180 aa8.81□□□□□ -1
TOP3A-207ENST00000493648 IFIT5Q13325 482 aaKnown RBP8.81□□□□□ -1
TOP3A-207ENST00000493648 DCAF8Q5TAQ9 597 aa8.81□□□□□ -1
TOP3A-207ENST00000493648 SLC51AQ86UW1 340 aa8.81□□□□□ -1
TOP3A-207ENST00000493648 TBC1D16Q8TBP0 767 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms