RNA–Protein interactions for RNA: ENST00000493613.5

NUDCD3-210, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-210ENST00000493613 FOXN1O15353 648 aa13.37□□□□□ -0.27
NUDCD3-210ENST00000493613 HOXB7P09629 217 aa13.37□□□□□ -0.27
NUDCD3-210ENST00000493613 DEFB115Q30KQ5 88 aa13.37□□□□□ -0.27
NUDCD3-210ENST00000493613 USP50Q70EL3 339 aaPredicted RBP13.37□□□□□ -0.27
NUDCD3-210ENST00000493613 MPNDQ8N594 471 aa13.37□□□□□ -0.27
NUDCD3-210ENST00000493613 PLBD2Q8NHP8 589 aa13.37□□□□□ -0.27
NUDCD3-210ENST00000493613 RTFDC1Q9BY42 306 aaPredicted RBP13.37□□□□□ -0.27
NUDCD3-210ENST00000493613 ZNRF3Q9ULT6 936 aa13.37□□□□□ -0.27
NUDCD3-210ENST00000493613 RASSF10A6NK89 507 aa13.36□□□□□ -0.27
NUDCD3-210ENST00000493613 CXCL9Q07325 125 aa13.36□□□□□ -0.27
NUDCD3-210ENST00000493613 GRAPQ13588 217 aa13.36□□□□□ -0.27
NUDCD3-210ENST00000493613 ANKRD13DQ6ZTN6 518 aa13.36□□□□□ -0.27
NUDCD3-210ENST00000493613 GRAPLQ8TC17 118 aaPredicted RBP13.36□□□□□ -0.27
NUDCD3-210ENST00000493613 AIDAQ96BJ3 306 aa13.36□□□□□ -0.27
NUDCD3-210ENST00000493613 CFAP44Q96MT7 982 aa13.36□□□□□ -0.27
NUDCD3-210ENST00000493613 GPRC5DQ9NZD1 345 aa13.36□□□□□ -0.27
NUDCD3-210ENST00000493613 ABT1Q9ULW3 272 aaKnown RBP13.36□□□□□ -0.27
NUDCD3-210ENST00000493613 KIAA2012Q0VF49 1180 aa13.35□□□□□ -0.27
NUDCD3-210ENST00000493613 DUSP27Q5VZP5 1158 aa13.35□□□□□ -0.27
NUDCD3-210ENST00000493613 ADARB2Q9NS39 739 aaKnown RBP13.35□□□□□ -0.27
NUDCD3-210ENST00000493613 HYPKQ9NX55 129 aa13.35□□□□□ -0.27
NUDCD3-210ENST00000493613 SCN9AQ15858 1988 aa13.34□□□□□ -0.27
NUDCD3-210ENST00000493613 ATP5J2-PTCD1G3V325 749 aa13.34□□□□□ -0.27
NUDCD3-210ENST00000493613 FMR1Q06787 632 aaKnown RBP eCLIP13.34□□□□□ -0.27
NUDCD3-210ENST00000493613 CIAPIN1Q6FI81 312 aa13.34□□□□□ -0.27
NUDCD3-210ENST00000493613 TMC4Q7Z404 712 aa13.34□□□□□ -0.27
NUDCD3-210ENST00000493613 FAM89AQ96GI7 184 aa13.34□□□□□ -0.27
NUDCD3-210ENST00000493613 ISCA1Q9BUE6 129 aa13.34□□□□□ -0.27
NUDCD3-210ENST00000493613 PRKRIP1Q9H875 184 aaPredicted RBP13.34□□□□□ -0.27
NUDCD3-210ENST00000493613 MBIPQ9NS73 344 aa13.34□□□□□ -0.27
NUDCD3-210ENST00000493613 CDHR2Q9BYE9 1310 aa13.34□□□□□ -0.27
NUDCD3-210ENST00000493613 WDR33Q9C0J8 1336 aaKnown RBP13.34□□□□□ -0.27
NUDCD3-210ENST00000493613 TRAF5O00463 557 aa13.33□□□□□ -0.28
NUDCD3-210ENST00000493613 RAD17O75943 681 aa13.33□□□□□ -0.28
NUDCD3-210ENST00000493613 GMPSP49915 693 aaPredicted RBP13.33□□□□□ -0.28
NUDCD3-210ENST00000493613 TNIP1Q15025 636 aa13.33□□□□□ -0.28
NUDCD3-210ENST00000493613 RTL5Q5HYW3 569 aaPredicted RBP13.33□□□□□ -0.28
NUDCD3-210ENST00000493613 CACNA1FO60840 1977 aa13.32□□□□□ -0.28
NUDCD3-210ENST00000493613 CTCFP49711 727 aaPredicted RBP13.32□□□□□ -0.28
NUDCD3-210ENST00000493613 SF3B3Q15393 1217 aaKnown RBP13.32□□□□□ -0.28
NUDCD3-210ENST00000493613 PAXIP1Q6ZW49 1069 aaPredicted RBP13.32□□□□□ -0.28
NUDCD3-210ENST00000493613 BCL2L13Q9BXK5 485 aa13.32□□□□□ -0.28
NUDCD3-210ENST00000493613 PRDM10Q9NQV6 1147 aa13.32□□□□□ -0.28
NUDCD3-210ENST00000493613 WBP1LQ9NX94 342 aa13.32□□□□□ -0.28
NUDCD3-210ENST00000493613 APAF1O14727 1248 aa13.31□□□□□ -0.28
NUDCD3-210ENST00000493613 ZNF853P0CG23 659 aa13.31□□□□□ -0.28
NUDCD3-210ENST00000493613 GNAI1P63096 354 aa13.31□□□□□ -0.28
NUDCD3-210ENST00000493613 MAP2K1Q02750 393 aaPredicted RBP13.31□□□□□ -0.28
NUDCD3-210ENST00000493613 CALD1Q05682 793 aaKnown RBP13.31□□□□□ -0.28
NUDCD3-210ENST00000493613 CST9Q5W186 159 aa13.31□□□□□ -0.28
NUDCD3-210ENST00000493613 RIC3Q7Z5B4 369 aa13.31□□□□□ -0.28
NUDCD3-210ENST00000493613 CELF1Q92879 486 aaKnown RBP13.31□□□□□ -0.28
NUDCD3-210ENST00000493613 IFT57Q9NWB7 429 aa13.31□□□□□ -0.28
NUDCD3-210ENST00000493613 NSFL1CQ9UNZ2 370 aaKnown RBP13.31□□□□□ -0.28
NUDCD3-210ENST00000493613 YDJCA8MPS7 323 aa13.3□□□□□ -0.28
NUDCD3-210ENST00000493613 ELL2O00472 640 aaPredicted RBP13.3□□□□□ -0.28
NUDCD3-210ENST00000493613 IRS4O14654 1257 aaPredicted RBP13.3□□□□□ -0.28
NUDCD3-210ENST00000493613 ECE1P42892 770 aa13.3□□□□□ -0.28
NUDCD3-210ENST00000493613 LBX1P52954 281 aa13.3□□□□□ -0.28
NUDCD3-210ENST00000493613 GOLGA2Q08379 1002 aa13.3□□□□□ -0.28
NUDCD3-210ENST00000493613 GRM1Q13255 1194 aa13.3□□□□□ -0.28
NUDCD3-210ENST00000493613 TRIM28Q13263 835 aaKnown RBP13.3□□□□□ -0.28
NUDCD3-210ENST00000493613 WASHC4Q2M389 1173 aa13.3□□□□□ -0.28
NUDCD3-210ENST00000493613 CAPNS2Q96L46 248 aa13.3□□□□□ -0.28
NUDCD3-210ENST00000493613 PHAXQ9H814 394 aaKnown RBP13.3□□□□□ -0.28
NUDCD3-210ENST00000493613 CYP4F22Q6NT55 531 aa13.29□□□□□ -0.28
NUDCD3-210ENST00000493613 GLIS2Q9BZE0 524 aaPredicted RBP13.29□□□□□ -0.28
NUDCD3-210ENST00000493613 CNOT7Q9UIV1 285 aaKnown RBP13.29□□□□□ -0.28
NUDCD3-210ENST00000493613 TLL2Q9Y6L7 1015 aa13.29□□□□□ -0.28
NUDCD3-210ENST00000493613 ZNF646O15015 1829 aaPredicted RBP13.29□□□□□ -0.28
NUDCD3-210ENST00000493613 C6orf229H3BNL8 230 aa13.28□□□□□ -0.28
NUDCD3-210ENST00000493613 RIMBP2O15034 1052 aa13.28□□□□□ -0.28
NUDCD3-210ENST00000493613 HIRAP54198 1017 aaPredicted RBP13.28□□□□□ -0.28
NUDCD3-210ENST00000493613 GPSM2P81274 684 aa13.28□□□□□ -0.28
NUDCD3-210ENST00000493613 ZBTB38Q8NAP3 1195 aaPredicted RBP13.28□□□□□ -0.28
NUDCD3-210ENST00000493613 ZC3H15Q8WU90 426 aaKnown RBP13.28□□□□□ -0.28
NUDCD3-210ENST00000493613 GPR101Q96P66 508 aaPredicted RBP13.28□□□□□ -0.28
NUDCD3-210ENST00000493613 MYD88Q99836 296 aa13.28□□□□□ -0.28
NUDCD3-210ENST00000493613 DBNDD1Q9H9R9 158 aa13.28□□□□□ -0.28
NUDCD3-210ENST00000493613 POLLQ9UGP5 575 aa13.28□□□□□ -0.28
NUDCD3-210ENST00000493613 PGAP2Q9UHJ9 254 aa13.28□□□□□ -0.28
NUDCD3-210ENST00000493613 AKAP11Q9UKA4 1901 aa13.28□□□□□ -0.28
NUDCD3-210ENST00000493613 SHTN1A0MZ66 631 aa13.27□□□□□ -0.29
NUDCD3-210ENST00000493613 H7C1D1 291 aa13.27□□□□□ -0.29
NUDCD3-210ENST00000493613 PSMD14O00487 310 aa13.27□□□□□ -0.29
NUDCD3-210ENST00000493613 CELF2O95319 508 aaKnown RBP13.27□□□□□ -0.29
NUDCD3-210ENST00000493613 HSPA8P11142 646 aaKnown RBP13.27□□□□□ -0.29
NUDCD3-210ENST00000493613 HSP90B1P14625 803 aaKnown RBP13.27□□□□□ -0.29
NUDCD3-210ENST00000493613 RPS8P62241 208 aaKnown RBP13.27□□□□□ -0.29
NUDCD3-210ENST00000493613 SAPCD2Q86UD0 394 aa13.27□□□□□ -0.29
NUDCD3-210ENST00000493613 MICALL2Q8IY33 904 aa13.27□□□□□ -0.29
NUDCD3-210ENST00000493613 C8orf58Q8NAV2 365 aa13.27□□□□□ -0.29
NUDCD3-210ENST00000493613 TRPM4Q8TD43 1214 aa13.27□□□□□ -0.29
NUDCD3-210ENST00000493613 EYA3Q99504 573 aa13.27□□□□□ -0.29
NUDCD3-210ENST00000493613 ZNF408Q9H9D4 720 aa13.27□□□□□ -0.29
NUDCD3-210ENST00000493613 ZBTB12Q9Y330 459 aaPredicted RBP13.27□□□□□ -0.29
NUDCD3-210ENST00000493613 CASP8AP2Q9UKL3 1982 aa13.27□□□□□ -0.29
NUDCD3-210ENST00000493613 ECE2O60344 883 aa13.26□□□□□ -0.29
NUDCD3-210ENST00000493613 CDC37L1Q7L3B6 337 aa13.26□□□□□ -0.29
NUDCD3-210ENST00000493613 CCDC191Q8NCU4 936 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms