RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 ZGPATQ8N5A5 531 aaKnown RBP8.03□□□□□ -1.12
VPS13B-205ENST00000493587 GOPCQ9HD26 462 aa8.03□□□□□ -1.12
VPS13B-205ENST00000493587 ETAA1Q9NY74 926 aa8.03□□□□□ -1.12
VPS13B-205ENST00000493587 FHOD1Q9Y613 1164 aa8.03□□□□□ -1.12
VPS13B-205ENST00000493587 FYB1O15117 783 aa8.02□□□□□ -1.12
VPS13B-205ENST00000493587 ST18O60284 1047 aa8.02□□□□□ -1.12
VPS13B-205ENST00000493587 SEC31AO94979 1220 aaKnown RBP8.02□□□□□ -1.12
VPS13B-205ENST00000493587 WWC2Q6AWC2 1192 aa8.02□□□□□ -1.12
VPS13B-205ENST00000493587 TADA2BQ86TJ2 420 aa8.02□□□□□ -1.12
VPS13B-205ENST00000493587 WDR63Q8IWG1 891 aa8.02□□□□□ -1.12
VPS13B-205ENST00000493587 RPUSD2Q8IZ73 545 aaKnown RBP8.02□□□□□ -1.12
VPS13B-205ENST00000493587 BORCS6Q96GS4 357 aa8.02□□□□□ -1.12
VPS13B-205ENST00000493587 PLEKHA4Q9H4M7 779 aa8.02□□□□□ -1.12
VPS13B-205ENST00000493587 VPS18Q9P253 973 aa8.02□□□□□ -1.12
VPS13B-205ENST00000493587 ANKARQ7Z5J8 1434 aa8.02□□□□□ -1.13
VPS13B-205ENST00000493587 PTPRCP08575 1304 aa8.02□□□□□ -1.13
VPS13B-205ENST00000493587 NEDD9Q14511 834 aa8.02□□□□□ -1.13
VPS13B-205ENST00000493587 RBBP5Q15291 538 aaKnown RBP8.02□□□□□ -1.13
VPS13B-205ENST00000493587 SLFNL1Q499Z3 407 aa8.02□□□□□ -1.13
VPS13B-205ENST00000493587 ANKRD45Q5TZF3 282 aa8.02□□□□□ -1.13
VPS13B-205ENST00000493587 EFCAB13Q8IY85 973 aa8.02□□□□□ -1.13
VPS13B-205ENST00000493587 CTCFLQ8NI51 663 aaPredicted RBP8.02□□□□□ -1.13
VPS13B-205ENST00000493587 MIEF2Q96C03 454 aa8.02□□□□□ -1.13
VPS13B-205ENST00000493587 PRAM1Q96QH2 718 aa8.02□□□□□ -1.13
VPS13B-205ENST00000493587 SRRTQ9BXP5 876 aaKnown RBP8.02□□□□□ -1.13
VPS13B-205ENST00000493587 DNAJC5Q9H3Z4 198 aa8.02□□□□□ -1.13
VPS13B-205ENST00000493587 GNL3LQ9NVN8 582 aaKnown RBP8.02□□□□□ -1.13
VPS13B-205ENST00000493587 ADAM21Q9UKJ8 722 aa8.02□□□□□ -1.13
VPS13B-205ENST00000493587 EVC2Q86UK5 1308 aa8.02□□□□□ -1.13
VPS13B-205ENST00000493587 ELF1P32519 619 aa8.02□□□□□ -1.13
VPS13B-205ENST00000493587 NEUROD2Q15784 382 aa8.02□□□□□ -1.13
VPS13B-205ENST00000493587 ANKRD18AQ8IVF6 992 aa8.02□□□□□ -1.13
VPS13B-205ENST00000493587 USP6P35125 1406 aa8.02□□□□□ -1.13
VPS13B-205ENST00000493587 C5P01031 1676 aa8.02□□□□□ -1.13
VPS13B-205ENST00000493587 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.01□□□□□ -1.13
VPS13B-205ENST00000493587 AP1G2O75843 785 aa8.01□□□□□ -1.13
VPS13B-205ENST00000493587 CCAR2Q8N163 923 aaKnown RBP8.01□□□□□ -1.13
VPS13B-205ENST00000493587 MRFAP1L1Q96HT8 127 aa8.01□□□□□ -1.13
VPS13B-205ENST00000493587 G3BP2Q9UN86 482 aaKnown RBP8.01□□□□□ -1.13
VPS13B-205ENST00000493587 ERCC3P19447 782 aa8.01□□□□□ -1.13
VPS13B-205ENST00000493587 CLNS1AP54105 237 aaKnown RBP8.01□□□□□ -1.13
VPS13B-205ENST00000493587 CCDC183Q5T5S1 534 aa8.01□□□□□ -1.13
VPS13B-205ENST00000493587 NFXL1Q6ZNB6 911 aa8.01□□□□□ -1.13
VPS13B-205ENST00000493587 HOMER1Q86YM7 354 aa8.01□□□□□ -1.13
VPS13B-205ENST00000493587 EXOC4Q96A65 974 aa8.01□□□□□ -1.13
VPS13B-205ENST00000493587 CENPHQ9H3R5 247 aa8.01□□□□□ -1.13
VPS13B-205ENST00000493587 CABP2Q9NPB3 220 aa8.01□□□□□ -1.13
VPS13B-205ENST00000493587 TRIM35Q9UPQ4 493 aa8.01□□□□□ -1.13
VPS13B-205ENST00000493587 NAA25Q14CX7 972 aa8.01□□□□□ -1.13
VPS13B-205ENST00000493587 SH3GL3Q99963 347 aa8.01□□□□□ -1.13
VPS13B-205ENST00000493587 RAD50Q92878 1312 aa8□□□□□ -1.13
VPS13B-205ENST00000493587 MAFGO15525 162 aa8□□□□□ -1.13
VPS13B-205ENST00000493587 SETSIPP0DME0 302 aa8□□□□□ -1.13
VPS13B-205ENST00000493587 CORO7P57737 925 aa8□□□□□ -1.13
VPS13B-205ENST00000493587 GIMAP6Q6P9H5 292 aa8□□□□□ -1.13
VPS13B-205ENST00000493587 ERC1Q8IUD2 1116 aa8□□□□□ -1.13
VPS13B-205ENST00000493587 TEX11Q8IYF3 940 aa8□□□□□ -1.13
VPS13B-205ENST00000493587 DDX11Q96FC9 970 aa8□□□□□ -1.13
VPS13B-205ENST00000493587 LAMB4A4D0S4 1761 aa8□□□□□ -1.13
VPS13B-205ENST00000493587 A0A087WUV0 522 aaPredicted RBP8□□□□□ -1.13
VPS13B-205ENST00000493587 ATP2B2Q01814 1243 aa8□□□□□ -1.13
VPS13B-205ENST00000493587 FOXR1Q6PIV2 292 aa8□□□□□ -1.13
VPS13B-205ENST00000493587 WAPLQ7Z5K2 1190 aa8□□□□□ -1.13
VPS13B-205ENST00000493587 ACBD3Q9H3P7 528 aa8□□□□□ -1.13
VPS13B-205ENST00000493587 APAF1O14727 1248 aa7.99□□□□□ -1.13
VPS13B-205ENST00000493587 SENP3Q9H4L4 574 aaPredicted RBP7.99□□□□□ -1.13
VPS13B-205ENST00000493587 CHMP3Q9Y3E7 222 aa7.99□□□□□ -1.13
VPS13B-205ENST00000493587 RPS6KL1Q9Y6S9 549 aa7.99□□□□□ -1.13
VPS13B-205ENST00000493587 CCDC171Q6TFL3 1326 aa7.99□□□□□ -1.13
VPS13B-205ENST00000493587 A0A1B0GUA9 196 aa7.99□□□□□ -1.13
VPS13B-205ENST00000493587 TPD52L2O43399 206 aaKnown RBP7.99□□□□□ -1.13
VPS13B-205ENST00000493587 ECEL1O95672 775 aa7.99□□□□□ -1.13
VPS13B-205ENST00000493587 HSP90B2PQ58FF3 399 aa7.99□□□□□ -1.13
VPS13B-205ENST00000493587 FBXW10Q5XX13 1052 aa7.99□□□□□ -1.13
VPS13B-205ENST00000493587 ODF2LQ9ULJ1 636 aa7.99□□□□□ -1.13
VPS13B-205ENST00000493587 KDRP35968 1356 aa7.99□□□□□ -1.13
VPS13B-205ENST00000493587 KINO60870 393 aaKnown RBP7.99□□□□□ -1.13
VPS13B-205ENST00000493587 GADD45BO75293 160 aaPredicted RBP7.99□□□□□ -1.13
VPS13B-205ENST00000493587 RWDD2BP57060 319 aa7.99□□□□□ -1.13
VPS13B-205ENST00000493587 ACRBPQ8NEB7 543 aa7.99□□□□□ -1.13
VPS13B-205ENST00000493587 ARMC2Q8NEN0 867 aa7.99□□□□□ -1.13
VPS13B-205ENST00000493587 SYTL4Q96C24 671 aaPredicted RBP7.99□□□□□ -1.13
VPS13B-205ENST00000493587 FAM107BQ9H098 131 aa7.99□□□□□ -1.13
VPS13B-205ENST00000493587 FAM53CQ9NYF3 392 aa7.99□□□□□ -1.13
VPS13B-205ENST00000493587 NRBP1Q9UHY1 535 aa7.99□□□□□ -1.13
VPS13B-205ENST00000493587 HNRNPH1P31943 449 aaKnown RBP7.98□□□□□ -1.13
VPS13B-205ENST00000493587 NUP188Q5SRE5 1749 aa7.98□□□□□ -1.13
VPS13B-205ENST00000493587 ISM2Q6H9L7 571 aa7.98□□□□□ -1.13
VPS13B-205ENST00000493587 CPLX2Q6PUV4 134 aaKnown RBP7.98□□□□□ -1.13
VPS13B-205ENST00000493587 TRIM74Q86UV6 250 aa7.98□□□□□ -1.13
VPS13B-205ENST00000493587 TRIM73Q86UV7 250 aa7.98□□□□□ -1.13
VPS13B-205ENST00000493587 TMCO5BA8MYB1 307 aa7.98□□□□□ -1.13
VPS13B-205ENST00000493587 SMARCA5O60264 1052 aaPredicted RBP7.98□□□□□ -1.13
VPS13B-205ENST00000493587 TRAF1Q13077 416 aa7.98□□□□□ -1.13
VPS13B-205ENST00000493587 MTA1Q13330 715 aa7.98□□□□□ -1.13
VPS13B-205ENST00000493587 MCM6Q14566 821 aa7.98□□□□□ -1.13
VPS13B-205ENST00000493587 C11orf91Q3C1V1 193 aa7.98□□□□□ -1.13
VPS13B-205ENST00000493587 CEP57Q86XR8 500 aa7.98□□□□□ -1.13
VPS13B-205ENST00000493587 ITPRIPQ8IWB1 547 aa7.98□□□□□ -1.13
VPS13B-205ENST00000493587 KLHL23Q8NBE8 558 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms