RNA–Protein interactions for RNA: ENST00000493185.2

CLTA-208, Transcript of clathrin light chain A, humanhuman

TSL 3

Gene CLTA, Length 714 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-208ENST00000493185 TSPYL6Q8N831 410 aa26.51■■□□□ 1.83
CLTA-208ENST00000493185 EPHX2P34913 555 aa26.5■■□□□ 1.83
CLTA-208ENST00000493185 RTL5Q5HYW3 569 aaPredicted RBP26.5■■□□□ 1.83
CLTA-208ENST00000493185 MPNDQ8N594 471 aa26.5■■□□□ 1.83
CLTA-208ENST00000493185 GJA3Q9Y6H8 435 aa26.5■■□□□ 1.83
CLTA-208ENST00000493185 IL16Q14005 1332 aa26.49■■□□□ 1.83
CLTA-208ENST00000493185 IRS4O14654 1257 aaPredicted RBP26.49■■□□□ 1.83
CLTA-208ENST00000493185 HSP90B1P14625 803 aaKnown RBP26.49■■□□□ 1.83
CLTA-208ENST00000493185 SF3B3Q15393 1217 aaKnown RBP26.49■■□□□ 1.83
CLTA-208ENST00000493185 AOC3Q16853 763 aa26.49■■□□□ 1.83
CLTA-208ENST00000493185 EAPPQ56P03 285 aaPredicted RBP26.49■■□□□ 1.83
CLTA-208ENST00000493185 MYD88Q99836 296 aa26.49■■□□□ 1.83
CLTA-208ENST00000493185 RTFDC1Q9BY42 306 aaPredicted RBP26.49■■□□□ 1.83
CLTA-208ENST00000493185 PNMA8AQ86V59 439 aaPredicted RBP26.48■■□□□ 1.83
CLTA-208ENST00000493185 ZBTB38Q8NAP3 1195 aaPredicted RBP26.48■■□□□ 1.83
CLTA-208ENST00000493185 STK31Q9BXU1 1019 aa26.48■■□□□ 1.83
CLTA-208ENST00000493185 CCDC191Q8NCU4 936 aa26.47■■□□□ 1.83
CLTA-208ENST00000493185 LMOD1P29536 600 aaPredicted RBP26.46■■□□□ 1.83
CLTA-208ENST00000493185 CLEC11AQ9Y240 323 aa26.46■■□□□ 1.83
CLTA-208ENST00000493185 LRRC37AA6NMS7 1700 aa26.45■■□□□ 1.83
CLTA-208ENST00000493185 TWISTNBQ3B726 338 aaPredicted RBP26.45■■□□□ 1.82
CLTA-208ENST00000493185 METTL22Q9BUU2 404 aaPredicted RBP26.45■■□□□ 1.82
CLTA-208ENST00000493185 CWC25Q9NXE8 425 aaPredicted RBP26.45■■□□□ 1.82
CLTA-208ENST00000493185 JMYQ8N9B5 988 aa26.44■■□□□ 1.82
CLTA-208ENST00000493185 ZNRF3Q9ULT6 936 aa26.44■■□□□ 1.82
CLTA-208ENST00000493185 KIAA2012Q0VF49 1180 aa26.43■■□□□ 1.82
CLTA-208ENST00000493185 CELF1Q92879 486 aaKnown RBP26.43■■□□□ 1.82
CLTA-208ENST00000493185 MAP3K2Q9Y2U5 619 aa26.43■■□□□ 1.82
CLTA-208ENST00000493185 ADAMTSL1Q8N6G6 1762 aa26.43■■□□□ 1.82
CLTA-208ENST00000493185 PCCAP05165 728 aaPredicted RBP26.42■■□□□ 1.82
CLTA-208ENST00000493185 KSR2Q6VAB6 950 aa26.42■■□□□ 1.82
CLTA-208ENST00000493185 CREBZFQ9NS37 354 aa26.42■■□□□ 1.82
CLTA-208ENST00000493185 SALL2Q9Y467 1007 aaPredicted RBP26.42■■□□□ 1.82
CLTA-208ENST00000493185 SCNN1DP51172 638 aa26.41■■□□□ 1.82
CLTA-208ENST00000493185 WDR63Q8IWG1 891 aa26.41■■□□□ 1.82
CLTA-208ENST00000493185 PI4KAP2A4QPH2 592 aa26.4■■□□□ 1.82
CLTA-208ENST00000493185 NEXNQ0ZGT2 675 aa26.4■■□□□ 1.82
CLTA-208ENST00000493185 PI4KAP1Q8N8J0 262 aa26.4■■□□□ 1.82
CLTA-208ENST00000493185 PASKQ96RG2 1323 aa26.39■■□□□ 1.82
CLTA-208ENST00000493185 FANCIQ9NVI1 1328 aa26.39■■□□□ 1.82
CLTA-208ENST00000493185 LTBP1Q14766 1721 aa26.39■■□□□ 1.82
CLTA-208ENST00000493185 DUOX1Q9NRD9 1551 aa26.39■■□□□ 1.82
CLTA-208ENST00000493185 RPS8P62241 208 aaKnown RBP26.39■■□□□ 1.82
CLTA-208ENST00000493185 CXCL9Q07325 125 aa26.39■■□□□ 1.82
CLTA-208ENST00000493185 CCDC152Q4G0S7 254 aa26.39■■□□□ 1.82
CLTA-208ENST00000493185 NSFL1CQ9UNZ2 370 aaKnown RBP26.39■■□□□ 1.82
CLTA-208ENST00000493185 CACNA1FO60840 1977 aa26.38■■□□□ 1.81
CLTA-208ENST00000493185 PDE8AO60658 829 aa26.38■■□□□ 1.81
CLTA-208ENST00000493185 SLC4A2P04920 1241 aa26.38■■□□□ 1.81
CLTA-208ENST00000493185 ITGBL1O95965 494 aaPredicted RBP26.37■■□□□ 1.81
CLTA-208ENST00000493185 EPS15P42566 896 aa26.37■■□□□ 1.81
CLTA-208ENST00000493185 FAM9BQ8IZU0 186 aa26.37■■□□□ 1.81
CLTA-208ENST00000493185 CNTROBQ8N137 903 aa26.37■■□□□ 1.81
CLTA-208ENST00000493185 COL4A1P02462 1669 aa26.36■■□□□ 1.81
CLTA-208ENST00000493185 WASHC4Q2M389 1173 aa26.36■■□□□ 1.81
CLTA-208ENST00000493185 MAP1SQ66K74 1059 aaPredicted RBP26.36■■□□□ 1.81
CLTA-208ENST00000493185 CIAPIN1Q6FI81 312 aa26.36■■□□□ 1.81
CLTA-208ENST00000493185 JARID2Q92833 1246 aaPredicted RBP26.36■■□□□ 1.81
CLTA-208ENST00000493185 C6orf229H3BNL8 230 aa26.35■■□□□ 1.81
CLTA-208ENST00000493185 TNIP1Q15025 636 aa26.35■■□□□ 1.81
CLTA-208ENST00000493185 USP50Q70EL3 339 aaPredicted RBP26.35■■□□□ 1.81
CLTA-208ENST00000493185 G2E3Q7L622 706 aa26.35■■□□□ 1.81
CLTA-208ENST00000493185 GPRC5DQ9NZD1 345 aa26.35■■□□□ 1.81
CLTA-208ENST00000493185 CDHR2Q9BYE9 1310 aa26.35■■□□□ 1.81
CLTA-208ENST00000493185 RAD17O75943 681 aa26.34■■□□□ 1.81
CLTA-208ENST00000493185 IGKV5-2P06315 115 aa26.34■■□□□ 1.81
CLTA-208ENST00000493185 GPSM2P81274 684 aa26.34■■□□□ 1.81
CLTA-208ENST00000493185 EYA3Q99504 573 aa26.34■■□□□ 1.81
CLTA-208ENST00000493185 SEC31BQ9NQW1 1179 aa26.34■■□□□ 1.81
CLTA-208ENST00000493185 TMEM88BA6NKF7 163 aa26.33■■□□□ 1.81
CLTA-208ENST00000493185 BCL2L13Q9BXK5 485 aa26.33■■□□□ 1.81
CLTA-208ENST00000493185 ADARB2Q9NS39 739 aaKnown RBP26.33■■□□□ 1.81
CLTA-208ENST00000493185 MYH3P11055 1940 aa26.33■■□□□ 1.81
CLTA-208ENST00000493185 GMPSP49915 693 aaPredicted RBP26.32■■□□□ 1.8
CLTA-208ENST00000493185 FLIIQ13045 1269 aa26.32■■□□□ 1.8
CLTA-208ENST00000493185 CCDC85AQ96PX6 553 aaPredicted RBP26.32■■□□□ 1.8
CLTA-208ENST00000493185 POLLQ9UGP5 575 aa26.32■■□□□ 1.8
CLTA-208ENST00000493185 MKRN1Q9UHC7 482 aaKnown RBP26.32■■□□□ 1.8
CLTA-208ENST00000493185 NEURL1BA8MQ27 555 aa26.31■■□□□ 1.8
CLTA-208ENST00000493185 EXOSC9Q06265 439 aaKnown RBP26.31■■□□□ 1.8
CLTA-208ENST00000493185 FKBP5Q13451 457 aaPredicted RBP26.31■■□□□ 1.8
CLTA-208ENST00000493185 CWF19L2Q2TBE0 894 aaKnown RBP26.31■■□□□ 1.8
CLTA-208ENST00000493185 PCNTO95613 3336 aa26.31■■□□□ 1.8
CLTA-208ENST00000493185 YDJCA8MPS7 323 aa26.3■■□□□ 1.8
CLTA-208ENST00000493185 RIMBP2O15034 1052 aa26.3■■□□□ 1.8
CLTA-208ENST00000493185 VAMP4O75379 141 aa26.3■■□□□ 1.8
CLTA-208ENST00000493185 CTSWP56202 376 aa26.3■■□□□ 1.8
CLTA-208ENST00000493185 ANKRD18AQ8IVF6 992 aa26.3■■□□□ 1.8
CLTA-208ENST00000493185 TBC1D16Q8TBP0 767 aa26.3■■□□□ 1.8
CLTA-208ENST00000493185 MYH16Q9H6N6 1097 aa26.3■■□□□ 1.8
CLTA-208ENST00000493185 ANKIB1Q9P2G1 1089 aa26.3■■□□□ 1.8
CLTA-208ENST00000493185 DBNDD1Q9H9R9 158 aa26.29■■□□□ 1.8
CLTA-208ENST00000493185 PODXL2Q9NZ53 605 aa26.29■■□□□ 1.8
CLTA-208ENST00000493185 CNTNAP1P78357 1384 aa26.29■■□□□ 1.8
CLTA-208ENST00000493185 CDC5LQ99459 802 aaKnown RBP26.28■■□□□ 1.8
CLTA-208ENST00000493185 UFL1O94874 794 aa26.27■■□□□ 1.8
CLTA-208ENST00000493185 DNAAF4Q8WXU2 420 aa26.27■■□□□ 1.8
CLTA-208ENST00000493185 ZC3H12CQ9C0D7 883 aaKnown RBP26.27■■□□□ 1.8
CLTA-208ENST00000493185 GGA1Q9UJY5 639 aa26.27■■□□□ 1.8
CLTA-208ENST00000493185 ECE2O60344 883 aa26.26■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms