RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 DPY19L2Q6NUT2 758 aa16.94■□□□□ 0.3
MSH6-208ENST00000493177 RTKN2Q8IZC4 609 aa16.94■□□□□ 0.3
MSH6-208ENST00000493177 TMEM57Q8N5G2 664 aa16.94■□□□□ 0.3
MSH6-208ENST00000493177 MYD88Q99836 296 aa16.94■□□□□ 0.3
MSH6-208ENST00000493177 ABCC4O15439 1325 aa16.94■□□□□ 0.3
MSH6-208ENST00000493177 LTBP3Q9NS15 1303 aa16.94■□□□□ 0.3
MSH6-208ENST00000493177 PPEF1O14829 653 aaPredicted RBP16.93■□□□□ 0.3
MSH6-208ENST00000493177 RLBP1P12271 317 aa16.93■□□□□ 0.3
MSH6-208ENST00000493177 FKBP4Q02790 459 aaKnown RBP eCLIP16.93■□□□□ 0.3
MSH6-208ENST00000493177 ITPRIPQ8IWB1 547 aa16.93■□□□□ 0.3
MSH6-208ENST00000493177 METTL22Q9BUU2 404 aaPredicted RBP16.93■□□□□ 0.3
MSH6-208ENST00000493177 RRAGCQ9HB90 399 aa16.93■□□□□ 0.3
MSH6-208ENST00000493177 DDX60Q8IY21 1712 aaKnown RBP16.93■□□□□ 0.3
MSH6-208ENST00000493177 HCLS1P14317 486 aaPredicted RBP16.92■□□□□ 0.3
MSH6-208ENST00000493177 CCT4P50991 539 aaKnown RBP16.92■□□□□ 0.3
MSH6-208ENST00000493177 PRELPP51888 382 aa16.92■□□□□ 0.3
MSH6-208ENST00000493177 COG6Q9Y2V7 657 aa16.92■□□□□ 0.3
MSH6-208ENST00000493177 GLTPD2A6NH11 291 aa16.91■□□□□ 0.3
MSH6-208ENST00000493177 TOMM70O94826 608 aa16.91■□□□□ 0.3
MSH6-208ENST00000493177 RTL5Q5HYW3 569 aaPredicted RBP16.91■□□□□ 0.3
MSH6-208ENST00000493177 CC2D2BQ6DHV5 1058 aa16.91■□□□□ 0.3
MSH6-208ENST00000493177 OLFM4Q6UX06 510 aa16.91■□□□□ 0.3
MSH6-208ENST00000493177 DDX46Q7L014 1031 aaKnown RBP16.91■□□□□ 0.3
MSH6-208ENST00000493177 CRAMP1Q96RY5 1269 aa16.91■□□□□ 0.3
MSH6-208ENST00000493177 CRBNQ96SW2 442 aa16.91■□□□□ 0.3
MSH6-208ENST00000493177 SRCIN1Q9C0H9 1055 aa16.91■□□□□ 0.3
MSH6-208ENST00000493177 HOXA10P31260 410 aaPredicted RBP16.9■□□□□ 0.3
MSH6-208ENST00000493177 SLC10A5Q5PT55 438 aa16.9■□□□□ 0.3
MSH6-208ENST00000493177 BEND3Q5T5X7 828 aa16.9■□□□□ 0.3
MSH6-208ENST00000493177 C3orf67Q6ZVT6 689 aa16.9■□□□□ 0.3
MSH6-208ENST00000493177 C7orf43Q8WVR3 580 aa16.9■□□□□ 0.3
MSH6-208ENST00000493177 ZNF277Q9NRM2 450 aaPredicted RBP16.9■□□□□ 0.3
MSH6-208ENST00000493177 TAF1P21675 1872 aa16.9■□□□□ 0.3
MSH6-208ENST00000493177 MVPQ14764 893 aaKnown RBP16.89■□□□□ 0.29
MSH6-208ENST00000493177 INTS3Q68E01 1043 aaKnown RBP16.89■□□□□ 0.29
MSH6-208ENST00000493177 SYNE4Q8N205 404 aa16.89■□□□□ 0.29
MSH6-208ENST00000493177 FAM89AQ96GI7 184 aa16.89■□□□□ 0.29
MSH6-208ENST00000493177 ISCA1Q9BUE6 129 aa16.89■□□□□ 0.29
MSH6-208ENST00000493177 IARSP41252 1262 aaKnown RBP16.88■□□□□ 0.29
MSH6-208ENST00000493177 CWF19L2Q2TBE0 894 aaKnown RBP16.88■□□□□ 0.29
MSH6-208ENST00000493177 LINS1Q8NG48 757 aa16.88■□□□□ 0.29
MSH6-208ENST00000493177 ALDH1L1O75891 902 aa16.87■□□□□ 0.29
MSH6-208ENST00000493177 IGKV5-2P06315 115 aa16.87■□□□□ 0.29
MSH6-208ENST00000493177 HSP90B1P14625 803 aaKnown RBP16.87■□□□□ 0.29
MSH6-208ENST00000493177 GRIPAP1Q4V328 841 aa16.87■□□□□ 0.29
MSH6-208ENST00000493177 JDP2Q8WYK2 163 aa16.87■□□□□ 0.29
MSH6-208ENST00000493177 DDX19BQ9UMR2 479 aa16.87■□□□□ 0.29
MSH6-208ENST00000493177 WDR90Q96KV7 1748 aa16.87■□□□□ 0.29
MSH6-208ENST00000493177 NEURL1BA8MQ27 555 aa16.86■□□□□ 0.29
MSH6-208ENST00000493177 IRS4O14654 1257 aaPredicted RBP16.86■□□□□ 0.29
MSH6-208ENST00000493177 VEGFAP15692 232 aaPredicted RBP16.86■□□□□ 0.29
MSH6-208ENST00000493177 EXOC6Q8TAG9 804 aa16.86■□□□□ 0.29
MSH6-208ENST00000493177 PSMD1Q99460 953 aa16.86■□□□□ 0.29
MSH6-208ENST00000493177 CWC25Q9NXE8 425 aaPredicted RBP16.86■□□□□ 0.29
MSH6-208ENST00000493177 HSPA6P17066 643 aa16.85■□□□□ 0.29
MSH6-208ENST00000493177 GRAPQ13588 217 aa16.85■□□□□ 0.29
MSH6-208ENST00000493177 CCDC191Q8NCU4 936 aa16.85■□□□□ 0.29
MSH6-208ENST00000493177 RBM46Q8TBY0 533 aaKnown RBP16.85■□□□□ 0.29
MSH6-208ENST00000493177 GRAPLQ8TC17 118 aaPredicted RBP16.85■□□□□ 0.29
MSH6-208ENST00000493177 CHMP4BQ9H444 224 aaKnown RBP16.85■□□□□ 0.29
MSH6-208ENST00000493177 C9orf78Q9NZ63 289 aaPredicted RBP16.85■□□□□ 0.29
MSH6-208ENST00000493177 MYH3P11055 1940 aa16.85■□□□□ 0.29
MSH6-208ENST00000493177 BBOX1O75936 387 aa16.84■□□□□ 0.29
MSH6-208ENST00000493177 DDNO94850 711 aaPredicted RBP16.84■□□□□ 0.29
MSH6-208ENST00000493177 TRIM28Q13263 835 aaKnown RBP16.84■□□□□ 0.29
MSH6-208ENST00000493177 LARGE2Q8N3Y3 721 aa16.84■□□□□ 0.29
MSH6-208ENST00000493177 ZBTB38Q8NAP3 1195 aaPredicted RBP16.84■□□□□ 0.29
MSH6-208ENST00000493177 ATP6V0A2Q9Y487 856 aa16.84■□□□□ 0.29
MSH6-208ENST00000493177 SCN4AP35499 1836 aa16.83■□□□□ 0.28
MSH6-208ENST00000493177 EIF6P56537 245 aaKnown RBP16.83■□□□□ 0.28
MSH6-208ENST00000493177 GCKRQ14397 625 aa16.83■□□□□ 0.28
MSH6-208ENST00000493177 DPP8Q6V1X1 898 aaPredicted RBP16.83■□□□□ 0.28
MSH6-208ENST00000493177 SUPT20HQ8NEM7 779 aa16.83■□□□□ 0.28
MSH6-208ENST00000493177 PPIP5K2O43314 1243 aa16.82■□□□□ 0.28
MSH6-208ENST00000493177 TMC4Q7Z404 712 aa16.82■□□□□ 0.28
MSH6-208ENST00000493177 SP8Q8IXZ3 490 aa16.82■□□□□ 0.28
MSH6-208ENST00000493177 NIM1KQ8IY84 436 aa16.82■□□□□ 0.28
MSH6-208ENST00000493177 MPNDQ8N594 471 aa16.82■□□□□ 0.28
MSH6-208ENST00000493177 SMC1BQ8NDV3 1235 aa16.82■□□□□ 0.28
MSH6-208ENST00000493177 MEIS3Q99687 375 aa16.82■□□□□ 0.28
MSH6-208ENST00000493177 ZNF541Q9H0D2 1346 aa16.81■□□□□ 0.28
MSH6-208ENST00000493177 IQCA1LA6NCM1 817 aa16.81■□□□□ 0.28
MSH6-208ENST00000493177 GRM8O00222 908 aa16.81■□□□□ 0.28
MSH6-208ENST00000493177 ZBTB7BO15156 539 aaPredicted RBP16.81■□□□□ 0.28
MSH6-208ENST00000493177 PCCAP05165 728 aaPredicted RBP16.81■□□□□ 0.28
MSH6-208ENST00000493177 GNAI3P08754 354 aa16.81■□□□□ 0.28
MSH6-208ENST00000493177 UBTFL1P0CB47 393 aaPredicted RBP16.81■□□□□ 0.28
MSH6-208ENST00000493177 FSTL1Q12841 308 aa16.81■□□□□ 0.28
MSH6-208ENST00000493177 JARID2Q92833 1246 aaPredicted RBP16.81■□□□□ 0.28
MSH6-208ENST00000493177 SPEF2Q9C093 1822 aa16.81■□□□□ 0.28
MSH6-208ENST00000493177 PDE8AO60658 829 aa16.8■□□□□ 0.28
MSH6-208ENST00000493177 SF3B3Q15393 1217 aaKnown RBP16.8■□□□□ 0.28
MSH6-208ENST00000493177 CCDC152Q4G0S7 254 aa16.8■□□□□ 0.28
MSH6-208ENST00000493177 UBE3BQ7Z3V4 1068 aa16.8■□□□□ 0.28
MSH6-208ENST00000493177 SLC51AQ86UW1 340 aa16.8■□□□□ 0.28
MSH6-208ENST00000493177 CCDC85AQ96PX6 553 aaPredicted RBP16.8■□□□□ 0.28
MSH6-208ENST00000493177 USP44Q9H0E7 712 aa16.8■□□□□ 0.28
MSH6-208ENST00000493177 GJA3Q9Y6H8 435 aa16.8■□□□□ 0.28
MSH6-208ENST00000493177 SNED1Q8TER0 1413 aa16.79■□□□□ 0.28
MSH6-208ENST00000493177 LRRC37AA6NMS7 1700 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms