RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 NBR1Q14596 966 aa17.06■□□□□ 0.32
PTPN7-216ENST00000492977 MEX3CQ5U5Q3 659 aaKnown RBP17.06■□□□□ 0.32
PTPN7-216ENST00000492977 ANO2Q9NQ90 1003 aa17.06■□□□□ 0.32
PTPN7-216ENST00000492977 TLR7Q9NYK1 1049 aaKnown RBP17.06■□□□□ 0.32
PTPN7-216ENST00000492977 THSD7AQ9UPZ6 1657 aa17.06■□□□□ 0.32
PTPN7-216ENST00000492977 ATP5JP18859 108 aa17.05■□□□□ 0.32
PTPN7-216ENST00000492977 GPTP24298 496 aa17.05■□□□□ 0.32
PTPN7-216ENST00000492977 HSPA1LP34931 641 aa17.05■□□□□ 0.32
PTPN7-216ENST00000492977 ANAPC15P60006 121 aa17.05■□□□□ 0.32
PTPN7-216ENST00000492977 IL17RAQ96F46 866 aa17.05■□□□□ 0.32
PTPN7-216ENST00000492977 IL27Q8NEV9 243 aa17.04■□□□□ 0.32
PTPN7-216ENST00000492977 SLKQ9H2G2 1235 aaPredicted RBP17.04■□□□□ 0.32
PTPN7-216ENST00000492977 DIAPH3Q9NSV4 1193 aa17.04■□□□□ 0.32
PTPN7-216ENST00000492977 DBNLQ9UJU6 430 aaKnown RBP17.04■□□□□ 0.32
PTPN7-216ENST00000492977 K7ELQ4 463 aaPredicted RBP17.03■□□□□ 0.32
PTPN7-216ENST00000492977 GJD4Q96KN9 370 aaPredicted RBP17.03■□□□□ 0.32
PTPN7-216ENST00000492977 AK7Q96M32 723 aa17.03■□□□□ 0.32
PTPN7-216ENST00000492977 TRMT112Q9UI30 125 aaKnown RBP17.03■□□□□ 0.32
PTPN7-216ENST00000492977 MYH14Q7Z406 1995 aaKnown RBP17.03■□□□□ 0.32
PTPN7-216ENST00000492977 IFIT5Q13325 482 aaKnown RBP17.02■□□□□ 0.32
PTPN7-216ENST00000492977 BOLA2Q9H3K6 86 aa17.02■□□□□ 0.32
PTPN7-216ENST00000492977 COL5A3P25940 1745 aaPredicted RBP17.02■□□□□ 0.32
PTPN7-216ENST00000492977 IRS4O14654 1257 aaPredicted RBP17.02■□□□□ 0.31
PTPN7-216ENST00000492977 ST18O60284 1047 aa17.02■□□□□ 0.31
PTPN7-216ENST00000492977 CAMTA2O94983 1202 aa17.02■□□□□ 0.31
PTPN7-216ENST00000492977 KIAA1211Q6ZU35 1233 aa17.02■□□□□ 0.31
PTPN7-216ENST00000492977 ZNF594Q96JF6 807 aaPredicted RBP17.02■□□□□ 0.31
PTPN7-216ENST00000492977 ONECUT3O60422 494 aaPredicted RBP17.01■□□□□ 0.31
PTPN7-216ENST00000492977 PDE8AO60658 829 aa17.01■□□□□ 0.31
PTPN7-216ENST00000492977 CD2BP2O95400 341 aaKnown RBP17.01■□□□□ 0.31
PTPN7-216ENST00000492977 CTSWP56202 376 aa17.01■□□□□ 0.31
PTPN7-216ENST00000492977 LRRC24Q50LG9 513 aa17.01■□□□□ 0.31
PTPN7-216ENST00000492977 PARP10Q53GL7 1025 aa17.01■□□□□ 0.31
PTPN7-216ENST00000492977 CWC27Q6UX04 472 aaKnown RBP17.01■□□□□ 0.31
PTPN7-216ENST00000492977 TTLL11Q8NHH1 800 aa17.01■□□□□ 0.31
PTPN7-216ENST00000492977 DBNDD2Q9BQY9 259 aa17.01■□□□□ 0.31
PTPN7-216ENST00000492977 IL25Q9H293 177 aa17.01■□□□□ 0.31
PTPN7-216ENST00000492977 CEP126Q9P2H0 1117 aa17.01■□□□□ 0.31
PTPN7-216ENST00000492977 MYH3P11055 1940 aa17.01■□□□□ 0.31
PTPN7-216ENST00000492977 AFF2P51816 1311 aa17.01■□□□□ 0.31
PTPN7-216ENST00000492977 UBN2Q6ZU65 1347 aa17.01■□□□□ 0.31
PTPN7-216ENST00000492977 RAD50Q92878 1312 aa17.01■□□□□ 0.31
PTPN7-216ENST00000492977 HSPA4P34932 840 aa17■□□□□ 0.31
PTPN7-216ENST00000492977 NFKBIBQ15653 356 aa17■□□□□ 0.31
PTPN7-216ENST00000492977 TAF7LQ5H9L4 462 aa17■□□□□ 0.31
PTPN7-216ENST00000492977 TICAM2Q86XR7 235 aa17■□□□□ 0.31
PTPN7-216ENST00000492977 LSG1Q9H089 658 aaKnown RBP17■□□□□ 0.31
PTPN7-216ENST00000492977 CHMP5Q9NZZ3 219 aa17■□□□□ 0.31
PTPN7-216ENST00000492977 TRPC5Q9UL62 973 aaPredicted RBP17■□□□□ 0.31
PTPN7-216ENST00000492977 ATRNO75882 1429 aa16.99■□□□□ 0.31
PTPN7-216ENST00000492977 RGL2O15211 777 aa16.99■□□□□ 0.31
PTPN7-216ENST00000492977 SYNE4Q8N205 404 aa16.99■□□□□ 0.31
PTPN7-216ENST00000492977 SPRYD3Q8NCJ5 442 aa16.99■□□□□ 0.31
PTPN7-216ENST00000492977 HAUS7Q99871 368 aa16.99■□□□□ 0.31
PTPN7-216ENST00000492977 PUS3Q9BZE2 481 aaKnown RBP16.99■□□□□ 0.31
PTPN7-216ENST00000492977 SNRKQ9NRH2 765 aa16.99■□□□□ 0.31
PTPN7-216ENST00000492977 AKAP2Q9Y2D5 859 aa16.99■□□□□ 0.31
PTPN7-216ENST00000492977 CNTNAP4Q9C0A0 1308 aa16.99■□□□□ 0.31
PTPN7-216ENST00000492977 NHSQ6T4R5 1651 aa16.99■□□□□ 0.31
PTPN7-216ENST00000492977 ZNF609O15014 1411 aa16.99■□□□□ 0.31
PTPN7-216ENST00000492977 ANKRD18BA2A2Z9 1011 aa16.98■□□□□ 0.31
PTPN7-216ENST00000492977 HSP90B1P14625 803 aaKnown RBP16.98■□□□□ 0.31
PTPN7-216ENST00000492977 RC3H1Q5TC82 1133 aaKnown RBP16.98■□□□□ 0.31
PTPN7-216ENST00000492977 CLEC4GQ6UXB4 293 aa16.98■□□□□ 0.31
PTPN7-216ENST00000492977 NEUROD6Q96NK8 337 aa16.98■□□□□ 0.31
PTPN7-216ENST00000492977 FSD1Q9BTV5 496 aa16.98■□□□□ 0.31
PTPN7-216ENST00000492977 UTP14AQ9BVJ6 771 aaKnown RBP16.98■□□□□ 0.31
PTPN7-216ENST00000492977 ZNF652Q9Y2D9 606 aa16.98■□□□□ 0.31
PTPN7-216ENST00000492977 SH3TC1Q8TE82 1336 aa16.98■□□□□ 0.31
PTPN7-216ENST00000492977 RFX7Q2KHR2 1363 aa16.98■□□□□ 0.31
PTPN7-216ENST00000492977 ITGA6P23229 1130 aa16.98■□□□□ 0.31
PTPN7-216ENST00000492977 DDIT3P35638 169 aa16.98■□□□□ 0.31
PTPN7-216ENST00000492977 LINC00116Q8NCU8 138 aa16.98■□□□□ 0.31
PTPN7-216ENST00000492977 CIZ1Q9ULV3 898 aaPredicted RBP16.98■□□□□ 0.31
PTPN7-216ENST00000492977 BTAF1O14981 1849 aa16.97■□□□□ 0.31
PTPN7-216ENST00000492977 MCM2P49736 904 aa16.97■□□□□ 0.31
PTPN7-216ENST00000492977 TIMM10P62072 90 aa16.97■□□□□ 0.31
PTPN7-216ENST00000492977 SUSD4Q5VX71 490 aa16.97■□□□□ 0.31
PTPN7-216ENST00000492977 GREM2Q9H772 168 aa16.97■□□□□ 0.31
PTPN7-216ENST00000492977 A0A1B0GUL7 405 aa16.96■□□□□ 0.31
PTPN7-216ENST00000492977 HSP90AA1P07900 732 aaKnown RBP16.96■□□□□ 0.31
PTPN7-216ENST00000492977 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.96■□□□□ 0.31
PTPN7-216ENST00000492977 PALD1Q9ULE6 856 aa16.96■□□□□ 0.31
PTPN7-216ENST00000492977 RIPOR2Q9Y4F9 1068 aa16.96■□□□□ 0.31
PTPN7-216ENST00000492977 NEK4P51957 841 aa16.95■□□□□ 0.3
PTPN7-216ENST00000492977 NMIQ13287 307 aaPredicted RBP16.95■□□□□ 0.3
PTPN7-216ENST00000492977 LDHAL6AQ6ZMR3 332 aa16.95■□□□□ 0.3
PTPN7-216ENST00000492977 CCDC85AQ96PX6 553 aaPredicted RBP16.95■□□□□ 0.3
PTPN7-216ENST00000492977 BCORQ6W2J9 1755 aa16.95■□□□□ 0.3
PTPN7-216ENST00000492977 PTF1AQ7RTS3 328 aa16.94■□□□□ 0.3
PTPN7-216ENST00000492977 NIP7Q9Y221 180 aaKnown RBP eCLIP16.94■□□□□ 0.3
PTPN7-216ENST00000492977 KCNB2Q92953 911 aa16.94■□□□□ 0.3
PTPN7-216ENST00000492977 FAM227BQ96M60 508 aa16.94■□□□□ 0.3
PTPN7-216ENST00000492977 DNAJC2Q99543 621 aaKnown RBP16.94■□□□□ 0.3
PTPN7-216ENST00000492977 RPS6KA4O75676 772 aa16.93■□□□□ 0.3
PTPN7-216ENST00000492977 NTSR2O95665 410 aa16.93■□□□□ 0.3
PTPN7-216ENST00000492977 METTL24Q5JXM2 366 aa16.93■□□□□ 0.3
PTPN7-216ENST00000492977 CCDC158Q5M9N0 1113 aa16.93■□□□□ 0.3
PTPN7-216ENST00000492977 CCDC171Q6TFL3 1326 aa16.93■□□□□ 0.3
PTPN7-216ENST00000492977 SEPT12Q8IYM1 358 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms