RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 CNTROBQ8N137 903 aa16.08■□□□□ 0.16
COL6A1-205ENST00000492851 FAM89AQ96GI7 184 aa16.08■□□□□ 0.16
COL6A1-205ENST00000492851 ATP5J2-PTCD1G3V325 749 aa16.07■□□□□ 0.16
COL6A1-205ENST00000492851 KIAA2012Q0VF49 1180 aa16.07■□□□□ 0.16
COL6A1-205ENST00000492851 TNIP1Q15025 636 aa16.07■□□□□ 0.16
COL6A1-205ENST00000492851 AOC3Q16853 763 aa16.07■□□□□ 0.16
COL6A1-205ENST00000492851 ZBTB38Q8NAP3 1195 aaPredicted RBP16.07■□□□□ 0.16
COL6A1-205ENST00000492851 CCDC191Q8NCU4 936 aa16.07■□□□□ 0.16
COL6A1-205ENST00000492851 ELL2O00472 640 aaPredicted RBP16.06■□□□□ 0.16
COL6A1-205ENST00000492851 IRS4O14654 1257 aaPredicted RBP16.06■□□□□ 0.16
COL6A1-205ENST00000492851 ANP32CO43423 234 aa16.05■□□□□ 0.16
COL6A1-205ENST00000492851 C8orf58Q8NAV2 365 aa16.05■□□□□ 0.16
COL6A1-205ENST00000492851 ADARB2Q9NS39 739 aaKnown RBP16.05■□□□□ 0.16
COL6A1-205ENST00000492851 ANKRD36CQ5JPF3 1778 aa16.05■□□□□ 0.16
COL6A1-205ENST00000492851 CDHR2Q9BYE9 1310 aa16.04■□□□□ 0.16
COL6A1-205ENST00000492851 SCNN1DP51172 638 aa16.04■□□□□ 0.16
COL6A1-205ENST00000492851 CXCL9Q07325 125 aa16.04■□□□□ 0.16
COL6A1-205ENST00000492851 CIAPIN1Q6FI81 312 aa16.04■□□□□ 0.16
COL6A1-205ENST00000492851 EYA3Q99504 573 aa16.04■□□□□ 0.16
COL6A1-205ENST00000492851 STK31Q9BXU1 1019 aa16.04■□□□□ 0.16
COL6A1-205ENST00000492851 PHAXQ9H814 394 aaKnown RBP16.04■□□□□ 0.16
COL6A1-205ENST00000492851 GPRC5DQ9NZD1 345 aa16.04■□□□□ 0.16
COL6A1-205ENST00000492851 NSFL1CQ9UNZ2 370 aaKnown RBP16.04■□□□□ 0.16
COL6A1-205ENST00000492851 IL16Q14005 1332 aa16.03■□□□□ 0.16
COL6A1-205ENST00000492851 EPS15P42566 896 aa16.03■□□□□ 0.16
COL6A1-205ENST00000492851 RPS8P62241 208 aaKnown RBP16.03■□□□□ 0.16
COL6A1-205ENST00000492851 WASHC4Q2M389 1173 aa16.03■□□□□ 0.16
COL6A1-205ENST00000492851 MAP1SQ66K74 1059 aaPredicted RBP16.03■□□□□ 0.16
COL6A1-205ENST00000492851 MYD88Q99836 296 aa16.03■□□□□ 0.16
COL6A1-205ENST00000492851 METTL22Q9BUU2 404 aaPredicted RBP16.03■□□□□ 0.16
COL6A1-205ENST00000492851 CWC25Q9NXE8 425 aaPredicted RBP16.03■□□□□ 0.16
COL6A1-205ENST00000492851 MKRN1Q9UHC7 482 aaKnown RBP16.03■□□□□ 0.16
COL6A1-205ENST00000492851 PCCAP05165 728 aaPredicted RBP16.02■□□□□ 0.16
COL6A1-205ENST00000492851 NEXNQ0ZGT2 675 aa16.02■□□□□ 0.16
COL6A1-205ENST00000492851 CCDC152Q4G0S7 254 aa16.02■□□□□ 0.16
COL6A1-205ENST00000492851 WWC1Q8IX03 1113 aa16.02■□□□□ 0.16
COL6A1-205ENST00000492851 BCL2L13Q9BXK5 485 aa16.02■□□□□ 0.16
COL6A1-205ENST00000492851 CNTNAP1P78357 1384 aa16.01■□□□□ 0.15
COL6A1-205ENST00000492851 ZNF316A6NFI3 1004 aaPredicted RBP16.01■□□□□ 0.15
COL6A1-205ENST00000492851 PDE8AO60658 829 aa16.01■□□□□ 0.15
COL6A1-205ENST00000492851 HSPA1AP0DMV8 641 aaKnown RBP16.01■□□□□ 0.15
COL6A1-205ENST00000492851 HSPA1BP0DMV9 641 aaKnown RBP16.01■□□□□ 0.15
COL6A1-205ENST00000492851 RTL5Q5HYW3 569 aaPredicted RBP16.01■□□□□ 0.15
COL6A1-205ENST00000492851 KSR2Q6VAB6 950 aa16.01■□□□□ 0.15
COL6A1-205ENST00000492851 ZC3H15Q8WU90 426 aaKnown RBP16.01■□□□□ 0.15
COL6A1-205ENST00000492851 CELF1Q92879 486 aaKnown RBP16.01■□□□□ 0.15
COL6A1-205ENST00000492851 MRS2Q9HD23 443 aa16.01■□□□□ 0.15
COL6A1-205ENST00000492851 COL4A5P29400 1685 aa16■□□□□ 0.15
COL6A1-205ENST00000492851 C6orf229H3BNL8 230 aa16■□□□□ 0.15
COL6A1-205ENST00000492851 H7C1D1 291 aa16■□□□□ 0.15
COL6A1-205ENST00000492851 DEFB115Q30KQ5 88 aa16■□□□□ 0.15
COL6A1-205ENST00000492851 RASSF10A6NK89 507 aa15.99■□□□□ 0.15
COL6A1-205ENST00000492851 GMPSP49915 693 aaPredicted RBP15.99■□□□□ 0.15
COL6A1-205ENST00000492851 TWISTNBQ3B726 338 aaPredicted RBP15.99■□□□□ 0.15
COL6A1-205ENST00000492851 DPF2Q92785 391 aa15.99■□□□□ 0.15
COL6A1-205ENST00000492851 ZNF428Q96B54 188 aa15.99■□□□□ 0.15
COL6A1-205ENST00000492851 ZC3H12CQ9C0D7 883 aaKnown RBP15.99■□□□□ 0.15
COL6A1-205ENST00000492851 MAP3K2Q9Y2U5 619 aa15.99■□□□□ 0.15
COL6A1-205ENST00000492851 ADAMTSL1Q8N6G6 1762 aa15.98■□□□□ 0.15
COL6A1-205ENST00000492851 RAD17O75943 681 aa15.98■□□□□ 0.15
COL6A1-205ENST00000492851 CCDC184Q52MB2 194 aa15.98■□□□□ 0.15
COL6A1-205ENST00000492851 SLC51AQ86UW1 340 aa15.98■□□□□ 0.15
COL6A1-205ENST00000492851 WDR63Q8IWG1 891 aa15.98■□□□□ 0.15
COL6A1-205ENST00000492851 TSPYL6Q8N831 410 aa15.98■□□□□ 0.15
COL6A1-205ENST00000492851 PODXL2Q9NZ53 605 aa15.98■□□□□ 0.15
COL6A1-205ENST00000492851 PGAP2Q9UHJ9 254 aa15.98■□□□□ 0.15
COL6A1-205ENST00000492851 CNOT7Q9UIV1 285 aaKnown RBP15.98■□□□□ 0.15
COL6A1-205ENST00000492851 ABT1Q9ULW3 272 aaKnown RBP15.98■□□□□ 0.15
COL6A1-205ENST00000492851 PI4KAP2A4QPH2 592 aa15.97■□□□□ 0.15
COL6A1-205ENST00000492851 G3V3G9 751 aa15.97■□□□□ 0.15
COL6A1-205ENST00000492851 SLC4A2P04920 1241 aa15.97■□□□□ 0.15
COL6A1-205ENST00000492851 RPS12P25398 132 aaKnown RBP15.97■□□□□ 0.15
COL6A1-205ENST00000492851 VEGFBP49765 207 aa15.97■□□□□ 0.15
COL6A1-205ENST00000492851 GPSM2P81274 684 aa15.97■□□□□ 0.15
COL6A1-205ENST00000492851 DCAF8Q5TAQ9 597 aa15.97■□□□□ 0.15
COL6A1-205ENST00000492851 COL13A1Q5TAT6 717 aaPredicted RBP15.97■□□□□ 0.15
COL6A1-205ENST00000492851 PI4KAP1Q8N8J0 262 aa15.97■□□□□ 0.15
COL6A1-205ENST00000492851 TSR2Q969E8 191 aaKnown RBP15.97■□□□□ 0.15
COL6A1-205ENST00000492851 AIDAQ96BJ3 306 aa15.97■□□□□ 0.15
COL6A1-205ENST00000492851 ANKIB1Q9P2G1 1089 aa15.97■□□□□ 0.15
COL6A1-205ENST00000492851 POLLQ9UGP5 575 aa15.97■□□□□ 0.15
COL6A1-205ENST00000492851 LAMB2P55268 1798 aa15.96■□□□□ 0.15
COL6A1-205ENST00000492851 ECE1P42892 770 aa15.96■□□□□ 0.15
COL6A1-205ENST00000492851 ANKRD18AQ8IVF6 992 aa15.96■□□□□ 0.15
COL6A1-205ENST00000492851 TBC1D16Q8TBP0 767 aa15.96■□□□□ 0.15
COL6A1-205ENST00000492851 CDC5LQ99459 802 aaKnown RBP15.96■□□□□ 0.15
COL6A1-205ENST00000492851 YDJCA8MPS7 323 aa15.95■□□□□ 0.14
COL6A1-205ENST00000492851 RIMBP2O15034 1052 aa15.95■□□□□ 0.14
COL6A1-205ENST00000492851 MAP2K1Q02750 393 aaPredicted RBP15.95■□□□□ 0.14
COL6A1-205ENST00000492851 CDC37L1Q7L3B6 337 aa15.95■□□□□ 0.14
COL6A1-205ENST00000492851 GGA1Q9UJY5 639 aa15.95■□□□□ 0.14
COL6A1-205ENST00000492851 DDX60Q8IY21 1712 aaKnown RBP15.94■□□□□ 0.14
COL6A1-205ENST00000492851 TNS4Q8IZW8 715 aa15.94■□□□□ 0.14
COL6A1-205ENST00000492851 DBNDD1Q9H9R9 158 aa15.94■□□□□ 0.14
COL6A1-205ENST00000492851 SEC31BQ9NQW1 1179 aa15.94■□□□□ 0.14
COL6A1-205ENST00000492851 WDR33Q9C0J8 1336 aaKnown RBP15.94■□□□□ 0.14
COL6A1-205ENST00000492851 ECE2O60344 883 aa15.93■□□□□ 0.14
COL6A1-205ENST00000492851 IGKV5-2P06315 115 aa15.93■□□□□ 0.14
COL6A1-205ENST00000492851 MICALL2Q8IY33 904 aa15.93■□□□□ 0.14
COL6A1-205ENST00000492851 MYH16Q9H6N6 1097 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms