RNA–Protein interactions for RNA: ENST00000492462.1

MDC1-207, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-207ENST00000492462 SLC4A2P04920 1241 aa15.16■□□□□ 0.02
MDC1-207ENST00000492462 VEGFAP15692 232 aaPredicted RBP15.16■□□□□ 0.02
MDC1-207ENST00000492462 KSR2Q6VAB6 950 aa15.16■□□□□ 0.02
MDC1-207ENST00000492462 PI4KAP1Q8N8J0 262 aa15.16■□□□□ 0.02
MDC1-207ENST00000492462 SMC1BQ8NDV3 1235 aa15.16■□□□□ 0.02
MDC1-207ENST00000492462 STK31Q9BXU1 1019 aa15.16■□□□□ 0.02
MDC1-207ENST00000492462 DDX58O95786 925 aaKnown RBP15.15■□□□□ 0.02
MDC1-207ENST00000492462 IGKV5-2P06315 115 aa15.15■□□□□ 0.02
MDC1-207ENST00000492462 SF3B3Q15393 1217 aaKnown RBP15.15■□□□□ 0.02
MDC1-207ENST00000492462 DDX46Q7L014 1031 aaKnown RBP15.15■□□□□ 0.02
MDC1-207ENST00000492462 CELF1Q92879 486 aaKnown RBP15.15■□□□□ 0.02
MDC1-207ENST00000492462 PRDM10Q9NQV6 1147 aa15.15■□□□□ 0.02
MDC1-207ENST00000492462 ZNF521Q96K83 1311 aa15.15■□□□□ 0.02
MDC1-207ENST00000492462 BBOX1O75936 387 aa15.14■□□□□ 0.01
MDC1-207ENST00000492462 GRAPQ13588 217 aa15.14■□□□□ 0.01
MDC1-207ENST00000492462 ZBTB38Q8NAP3 1195 aaPredicted RBP15.14■□□□□ 0.01
MDC1-207ENST00000492462 CCDC191Q8NCU4 936 aa15.14■□□□□ 0.01
MDC1-207ENST00000492462 GRAPLQ8TC17 118 aaPredicted RBP15.14■□□□□ 0.01
MDC1-207ENST00000492462 CHMP4AQ9BY43 222 aa15.14■□□□□ 0.01
MDC1-207ENST00000492462 CWC25Q9NXE8 425 aaPredicted RBP15.14■□□□□ 0.01
MDC1-207ENST00000492462 CACNA1FO60840 1977 aa15.14■□□□□ 0.01
MDC1-207ENST00000492462 LRRC37AA6NMS7 1700 aa15.13■□□□□ 0.01
MDC1-207ENST00000492462 FZD9O00144 591 aa15.13■□□□□ 0.01
MDC1-207ENST00000492462 PCCAP05165 728 aaPredicted RBP15.13■□□□□ 0.01
MDC1-207ENST00000492462 CWF19L2Q2TBE0 894 aaKnown RBP15.13■□□□□ 0.01
MDC1-207ENST00000492462 SP8Q8IXZ3 490 aa15.13■□□□□ 0.01
MDC1-207ENST00000492462 FOXN1O15353 648 aa15.12■□□□□ 0.01
MDC1-207ENST00000492462 POTEIP0CG38 1075 aa15.12■□□□□ 0.01
MDC1-207ENST00000492462 POTEJP0CG39 1038 aa15.12■□□□□ 0.01
MDC1-207ENST00000492462 FLIIQ13045 1269 aa15.12■□□□□ 0.01
MDC1-207ENST00000492462 AOC3Q16853 763 aa15.12■□□□□ 0.01
MDC1-207ENST00000492462 LARGE2Q8N3Y3 721 aa15.12■□□□□ 0.01
MDC1-207ENST00000492462 ABHD8Q96I13 439 aa15.12■□□□□ 0.01
MDC1-207ENST00000492462 CCDC85AQ96PX6 553 aaPredicted RBP15.12■□□□□ 0.01
MDC1-207ENST00000492462 SEC31BQ9NQW1 1179 aa15.12■□□□□ 0.01
MDC1-207ENST00000492462 DUOX1Q9NRD9 1551 aa15.11■□□□□ 0.01
MDC1-207ENST00000492462 GRIPAP1Q4V328 841 aa15.11■□□□□ 0.01
MDC1-207ENST00000492462 MPNDQ8N594 471 aa15.11■□□□□ 0.01
MDC1-207ENST00000492462 JDP2Q8WYK2 163 aa15.11■□□□□ 0.01
MDC1-207ENST00000492462 MYH16Q9H6N6 1097 aa15.11■□□□□ 0.01
MDC1-207ENST00000492462 SCN4AP35499 1836 aa15.1■□□□□ 0.01
MDC1-207ENST00000492462 NEURL1BA8MQ27 555 aa15.1■□□□□ 0.01
MDC1-207ENST00000492462 PPIP5K2O43314 1243 aa15.1■□□□□ 0.01
MDC1-207ENST00000492462 FKBP5Q13451 457 aaPredicted RBP15.1■□□□□ 0.01
MDC1-207ENST00000492462 DPP8Q6V1X1 898 aaPredicted RBP15.1■□□□□ 0.01
MDC1-207ENST00000492462 L3MBTL3Q96JM7 780 aaPredicted RBP15.1■□□□□ 0.01
MDC1-207ENST00000492462 RTFDC1Q9BY42 306 aaPredicted RBP15.1■□□□□ 0.01
MDC1-207ENST00000492462 TMX4Q9H1E5 349 aaPredicted RBP15.1■□□□□ 0.01
MDC1-207ENST00000492462 LTBP1Q14766 1721 aa15.09■□□□□ 0.01
MDC1-207ENST00000492462 RGS19P49795 217 aa15.09■□□□□ 0.01
MDC1-207ENST00000492462 GJA3Q9Y6H8 435 aa15.09■□□□□ 0.01
MDC1-207ENST00000492462 MYH3P11055 1940 aa15.09■□□□□ 0.01
MDC1-207ENST00000492462 F6X3S4 739 aa15.08■□□□□ 0
MDC1-207ENST00000492462 PDE8AO60658 829 aa15.08■□□□□ 0
MDC1-207ENST00000492462 RPS8P62241 208 aaKnown RBP15.08■□□□□ 0
MDC1-207ENST00000492462 GPSM2P81274 684 aa15.08■□□□□ 0
MDC1-207ENST00000492462 NEXNQ0ZGT2 675 aa15.08■□□□□ 0
MDC1-207ENST00000492462 NIM1KQ8IY84 436 aa15.08■□□□□ 0
MDC1-207ENST00000492462 DNAAF4Q8WXU2 420 aa15.08■□□□□ 0
MDC1-207ENST00000492462 TAF1DQ9H5J8 278 aaPredicted RBP15.08■□□□□ 0
MDC1-207ENST00000492462 CDHR2Q9BYE9 1310 aa15.08■□□□□ 0
MDC1-207ENST00000492462 EIF6P56537 245 aaKnown RBP15.07■□□□□ 0
MDC1-207ENST00000492462 UBE3BQ7Z3V4 1068 aa15.07■□□□□ 0
MDC1-207ENST00000492462 TMC4Q7Z404 712 aa15.07■□□□□ 0
MDC1-207ENST00000492462 GPC2Q8N158 579 aa15.07■□□□□ 0
MDC1-207ENST00000492462 SUPT20HQ8NEM7 779 aa15.07■□□□□ 0
MDC1-207ENST00000492462 GPR101Q96P66 508 aaPredicted RBP15.07■□□□□ 0
MDC1-207ENST00000492462 NSFL1CQ9UNZ2 370 aaKnown RBP15.07■□□□□ 0
MDC1-207ENST00000492462 SPEF2Q9C093 1822 aa15.06■□□□□ 0
MDC1-207ENST00000492462 IQCA1LA6NCM1 817 aa15.06■□□□□ 0
MDC1-207ENST00000492462 H7C1W4 665 aa15.06■□□□□ 0
MDC1-207ENST00000492462 CCER2I3L3R5 266 aa15.06■□□□□ 0
MDC1-207ENST00000492462 KIAA2012Q0VF49 1180 aa15.06■□□□□ 0
MDC1-207ENST00000492462 GCKRQ14397 625 aa15.06■□□□□ 0
MDC1-207ENST00000492462 CCDC152Q4G0S7 254 aa15.06■□□□□ 0
MDC1-207ENST00000492462 CDCA7LQ96GN5 454 aa15.06■□□□□ 0
MDC1-207ENST00000492462 POLLQ9UGP5 575 aa15.06■□□□□ 0
MDC1-207ENST00000492462 HACL1Q9UJ83 578 aa15.06■□□□□ 0
MDC1-207ENST00000492462 EPHX2P34913 555 aa15.05■□□□□ -0
MDC1-207ENST00000492462 CTCFP49711 727 aaPredicted RBP15.05■□□□□ -0
MDC1-207ENST00000492462 CASP7P55210 303 aa15.05■□□□□ -0
MDC1-207ENST00000492462 CTSWP56202 376 aa15.05■□□□□ -0
MDC1-207ENST00000492462 CXCL9Q07325 125 aa15.05■□□□□ -0
MDC1-207ENST00000492462 CHADLQ6NUI6 762 aa15.05■□□□□ -0
MDC1-207ENST00000492462 LINS1Q8NG48 757 aa15.05■□□□□ -0
MDC1-207ENST00000492462 TTLL11Q8NHH1 800 aa15.05■□□□□ -0
MDC1-207ENST00000492462 ZNRF3Q9ULT6 936 aa15.05■□□□□ -0
MDC1-207ENST00000492462 ADAMTSL1Q8N6G6 1762 aa15.05■□□□□ -0
MDC1-207ENST00000492462 TNRC18O15417 2968 aaPredicted RBP15.05■□□□□ -0
MDC1-207ENST00000492462 PDE4DIPQ5VU43 2346 aa15.04■□□□□ -0
MDC1-207ENST00000492462 YDJCA8MPS7 323 aa15.04■□□□□ -0
MDC1-207ENST00000492462 RIMBP2O15034 1052 aa15.04■□□□□ -0
MDC1-207ENST00000492462 HSP90B1P14625 803 aaKnown RBP15.04■□□□□ -0
MDC1-207ENST00000492462 SCNN1DP51172 638 aa15.04■□□□□ -0
MDC1-207ENST00000492462 SLFN5Q08AF3 891 aa15.04■□□□□ -0
MDC1-207ENST00000492462 EAPPQ56P03 285 aaPredicted RBP15.04■□□□□ -0
MDC1-207ENST00000492462 VPS33BQ9H267 617 aa15.04■□□□□ -0
MDC1-207ENST00000492462 GREM2Q9H772 168 aa15.04■□□□□ -0
MDC1-207ENST00000492462 CCDC85CA6NKD9 419 aa15.03■□□□□ -0
MDC1-207ENST00000492462 C6orf229H3BNL8 230 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms