RNA–Protein interactions for RNA: ENST00000492170.1

MRPL55-231, Transcript of mitochondrial ribosomal protein L55, human

TSL 5

Gene MRPL55, Length 241 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-231	ENST00000492170	TMC4	Q7Z404	712 aa		19.9	■□□□□ 0.78
MRPL55-231	ENST00000492170	ISCA1	Q9BUE6	129 aa		19.9	■□□□□ 0.78
MRPL55-231	ENST00000492170	ZNRF3	Q9ULT6	936 aa		19.9	■□□□□ 0.78
MRPL55-231	ENST00000492170	APAF1	O14727	1248 aa		19.89	■□□□□ 0.77
MRPL55-231	ENST00000492170	USP50	Q70EL3	339 aa	Predicted RBP	19.89	■□□□□ 0.77
MRPL55-231	ENST00000492170	ZNF428	Q96B54	188 aa		19.89	■□□□□ 0.77
MRPL55-231	ENST00000492170	IFT57	Q9NWB7	429 aa		19.89	■□□□□ 0.77
MRPL55-231	ENST00000492170	ATP5J2-PTCD1	G3V325	749 aa		19.88	■□□□□ 0.77
MRPL55-231	ENST00000492170	ZNF853	P0CG23	659 aa		19.88	■□□□□ 0.77
MRPL55-231	ENST00000492170	GNAI1	P63096	354 aa		19.88	■□□□□ 0.77
MRPL55-231	ENST00000492170	KIAA2012	Q0VF49	1180 aa		19.88	■□□□□ 0.77
MRPL55-231	ENST00000492170	FAM89A	Q96GI7	184 aa		19.88	■□□□□ 0.77
MRPL55-231	ENST00000492170	VEGFB	P49765	207 aa		19.87	■□□□□ 0.77
MRPL55-231	ENST00000492170	CXCL9	Q07325	125 aa		19.87	■□□□□ 0.77
MRPL55-231	ENST00000492170	GOLGA2	Q08379	1002 aa		19.87	■□□□□ 0.77
MRPL55-231	ENST00000492170	ADARB2	Q9NS39	739 aa	Known RBP	19.87	■□□□□ 0.77
MRPL55-231	ENST00000492170	GPRC5D	Q9NZD1	345 aa		19.87	■□□□□ 0.77
MRPL55-231	ENST00000492170	DDX60	Q8IY21	1712 aa	Known RBP	19.86	■□□□□ 0.77
MRPL55-231	ENST00000492170	SF3B3	Q15393	1217 aa	Known RBP	19.86	■□□□□ 0.77
MRPL55-231	ENST00000492170	CIAPIN1	Q6FI81	312 aa		19.86	■□□□□ 0.77
MRPL55-231	ENST00000492170	ABT1	Q9ULW3	272 aa	Known RBP	19.86	■□□□□ 0.77
MRPL55-231	ENST00000492170	CDHR2	Q9BYE9	1310 aa		19.85	■□□□□ 0.77
MRPL55-231	ENST00000492170	RASSF10	A6NK89	507 aa		19.85	■□□□□ 0.77
MRPL55-231	ENST00000492170	TRIM28	Q13263	835 aa	Known RBP	19.85	■□□□□ 0.77
MRPL55-231	ENST00000492170	TNIP1	Q15025	636 aa		19.85	■□□□□ 0.77
MRPL55-231	ENST00000492170	RIC3	Q7Z5B4	369 aa		19.85	■□□□□ 0.77
MRPL55-231	ENST00000492170	AIDA	Q96BJ3	306 aa		19.85	■□□□□ 0.77
MRPL55-231	ENST00000492170	LRRC37A	A6NMS7	1700 aa		19.85	■□□□□ 0.77
MRPL55-231	ENST00000492170	IRS4	O14654	1257 aa	Predicted RBP	19.84	■□□□□ 0.77
MRPL55-231	ENST00000492170	GMPS	P49915	693 aa	Predicted RBP	19.84	■□□□□ 0.77
MRPL55-231	ENST00000492170	DEFB115	Q30KQ5	88 aa		19.84	■□□□□ 0.77
MRPL55-231	ENST00000492170	DUOX1	Q9NRD9	1551 aa		19.83	■□□□□ 0.77
MRPL55-231	ENST00000492170	ZNF316	A6NFI3	1004 aa	Predicted RBP	19.83	■□□□□ 0.77
MRPL55-231	ENST00000492170	RAD17	O75943	681 aa		19.83	■□□□□ 0.77
MRPL55-231	ENST00000492170	HSP90B1	P14625	803 aa	Known RBP	19.83	■□□□□ 0.77
MRPL55-231	ENST00000492170	RTL5	Q5HYW3	569 aa	Predicted RBP	19.83	■□□□□ 0.77
MRPL55-231	ENST00000492170	CELF1	Q92879	486 aa	Known RBP	19.83	■□□□□ 0.77
MRPL55-231	ENST00000492170	BCL2L13	Q9BXK5	485 aa		19.83	■□□□□ 0.77
MRPL55-231	ENST00000492170	CHMP4A	Q9BY43	222 aa		19.83	■□□□□ 0.77
MRPL55-231	ENST00000492170	TAF1	P21675	1872 aa		19.82	■□□□□ 0.76
MRPL55-231	ENST00000492170	ELL2	O00472	640 aa	Predicted RBP	19.82	■□□□□ 0.76
MRPL55-231	ENST00000492170	FOXN1	O15353	648 aa		19.82	■□□□□ 0.76
MRPL55-231	ENST00000492170	CAPN15	O75808	1086 aa		19.81	■□□□□ 0.76
MRPL55-231	ENST00000492170	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	19.81	■□□□□ 0.76
MRPL55-231	ENST00000492170	PHAX	Q9H814	394 aa	Known RBP	19.81	■□□□□ 0.76
MRPL55-231	ENST00000492170	NSFL1C	Q9UNZ2	370 aa	Known RBP	19.81	■□□□□ 0.76
MRPL55-231	ENST00000492170	CTCF	P49711	727 aa	Predicted RBP	19.8	■□□□□ 0.76
MRPL55-231	ENST00000492170	WASHC4	Q2M389	1173 aa		19.8	■□□□□ 0.76
MRPL55-231	ENST00000492170	MYD88	Q99836	296 aa		19.8	■□□□□ 0.76
MRPL55-231	ENST00000492170	WDR33	Q9C0J8	1336 aa	Known RBP	19.79	■□□□□ 0.76
MRPL55-231	ENST00000492170	YDJC	A8MPS7	323 aa		19.79	■□□□□ 0.76
MRPL55-231	ENST00000492170	C6orf229	H3BNL8	230 aa		19.79	■□□□□ 0.76
MRPL55-231	ENST00000492170	TRAF5	O00463	557 aa		19.79	■□□□□ 0.76
MRPL55-231	ENST00000492170	DDX58	O95786	925 aa	Known RBP	19.79	■□□□□ 0.76
MRPL55-231	ENST00000492170	FMR1	Q06787	632 aa	Known RBP eCLIP	19.79	■□□□□ 0.76
MRPL55-231	ENST00000492170	CCDC30	Q5VVM6	783 aa		19.79	■□□□□ 0.76
MRPL55-231	ENST00000492170	C8orf58	Q8NAV2	365 aa		19.79	■□□□□ 0.76
MRPL55-231	ENST00000492170	CCDC191	Q8NCU4	936 aa		19.79	■□□□□ 0.76
MRPL55-231	ENST00000492170	EYA3	Q99504	573 aa		19.79	■□□□□ 0.76
MRPL55-231	ENST00000492170	PRDM10	Q9NQV6	1147 aa		19.79	■□□□□ 0.76
MRPL55-231	ENST00000492170	RPS8	P62241	208 aa	Known RBP	19.78	■□□□□ 0.76
MRPL55-231	ENST00000492170	GPSM2	P81274	684 aa		19.78	■□□□□ 0.76
MRPL55-231	ENST00000492170	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	19.78	■□□□□ 0.76
MRPL55-231	ENST00000492170	WBP1L	Q9NX94	342 aa		19.78	■□□□□ 0.76
MRPL55-231	ENST00000492170	TRPM7	Q96QT4	1865 aa		19.77	■□□□□ 0.76
MRPL55-231	ENST00000492170		H7C1D1	291 aa		19.77	■□□□□ 0.76
MRPL55-231	ENST00000492170	ECE1	P42892	770 aa		19.77	■□□□□ 0.76
MRPL55-231	ENST00000492170	MAP2K1	Q02750	393 aa	Predicted RBP	19.77	■□□□□ 0.76
MRPL55-231	ENST00000492170	ZC3H15	Q8WU90	426 aa	Known RBP	19.77	■□□□□ 0.76
MRPL55-231	ENST00000492170	DBNDD1	Q9H9R9	158 aa		19.77	■□□□□ 0.76
MRPL55-231	ENST00000492170	CWC25	Q9NXE8	425 aa	Predicted RBP	19.77	■□□□□ 0.76
MRPL55-231	ENST00000492170	POLL	Q9UGP5	575 aa		19.77	■□□□□ 0.76
MRPL55-231	ENST00000492170	CNOT7	Q9UIV1	285 aa	Known RBP	19.77	■□□□□ 0.76
MRPL55-231	ENST00000492170	COL4A1	P02462	1669 aa		19.76	■□□□□ 0.75
MRPL55-231	ENST00000492170	RIMBP2	O15034	1052 aa		19.76	■□□□□ 0.75
MRPL55-231	ENST00000492170	PCCA	P05165	728 aa	Predicted RBP	19.76	■□□□□ 0.75
MRPL55-231	ENST00000492170	CCDC152	Q4G0S7	254 aa		19.76	■□□□□ 0.75
MRPL55-231	ENST00000492170	CST9	Q5W186	159 aa		19.76	■□□□□ 0.75
MRPL55-231	ENST00000492170	TRPM4	Q8TD43	1214 aa		19.76	■□□□□ 0.75
MRPL55-231	ENST00000492170	CAPNS2	Q96L46	248 aa		19.76	■□□□□ 0.75
MRPL55-231	ENST00000492170	PGAP2	Q9UHJ9	254 aa		19.76	■□□□□ 0.75
MRPL55-231	ENST00000492170	PSMD14	O00487	310 aa		19.75	■□□□□ 0.75
MRPL55-231	ENST00000492170	PDE8A	O60658	829 aa		19.75	■□□□□ 0.75
MRPL55-231	ENST00000492170	MICALL2	Q8IY33	904 aa		19.75	■□□□□ 0.75
MRPL55-231	ENST00000492170	DPF2	Q92785	391 aa		19.75	■□□□□ 0.75
MRPL55-231	ENST00000492170	METTL22	Q9BUU2	404 aa	Predicted RBP	19.75	■□□□□ 0.75
MRPL55-231	ENST00000492170	GLIS2	Q9BZE0	524 aa	Predicted RBP	19.75	■□□□□ 0.75
MRPL55-231	ENST00000492170	TLL2	Q9Y6L7	1015 aa		19.75	■□□□□ 0.75
MRPL55-231	ENST00000492170	ECE2	O60344	883 aa		19.74	■□□□□ 0.75
MRPL55-231	ENST00000492170	CELF2	O95319	508 aa	Known RBP	19.74	■□□□□ 0.75
MRPL55-231	ENST00000492170	HIRA	P54198	1017 aa	Predicted RBP	19.74	■□□□□ 0.75
MRPL55-231	ENST00000492170	TSPYL6	Q8N831	410 aa		19.74	■□□□□ 0.75
MRPL55-231	ENST00000492170	TBC1D16	Q8TBP0	767 aa		19.74	■□□□□ 0.75
MRPL55-231	ENST00000492170	SEC31B	Q9NQW1	1179 aa		19.74	■□□□□ 0.75
MRPL55-231	ENST00000492170	ZBTB12	Q9Y330	459 aa	Predicted RBP	19.74	■□□□□ 0.75
MRPL55-231	ENST00000492170	UFL1	O94874	794 aa		19.73	■□□□□ 0.75
MRPL55-231	ENST00000492170	RPS12	P25398	132 aa	Known RBP	19.73	■□□□□ 0.75
MRPL55-231	ENST00000492170	GRM1	Q13255	1194 aa		19.73	■□□□□ 0.75
MRPL55-231	ENST00000492170	CCDC27	Q2M243	656 aa		19.73	■□□□□ 0.75
MRPL55-231	ENST00000492170	CYP4F22	Q6NT55	531 aa		19.73	■□□□□ 0.75

Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms