RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 SUPT20HQ8NEM7 779 aa10.86□□□□□ -0.67
SMARCB1-207ENST00000491967 FAM89AQ96GI7 184 aa10.86□□□□□ -0.67
SMARCB1-207ENST00000491967 PHAXQ9H814 394 aaKnown RBP10.86□□□□□ -0.67
SMARCB1-207ENST00000491967 ZNRF3Q9ULT6 936 aa10.86□□□□□ -0.67
SMARCB1-207ENST00000491967 COL4A1P02462 1669 aa10.85□□□□□ -0.67
SMARCB1-207ENST00000491967 IL16Q14005 1332 aa10.85□□□□□ -0.67
SMARCB1-207ENST00000491967 ATP5J2-PTCD1G3V325 749 aa10.85□□□□□ -0.67
SMARCB1-207ENST00000491967 PPIP5K2O43314 1243 aa10.85□□□□□ -0.67
SMARCB1-207ENST00000491967 CAPN15O75808 1086 aa10.85□□□□□ -0.67
SMARCB1-207ENST00000491967 EPS15P42566 896 aa10.85□□□□□ -0.67
SMARCB1-207ENST00000491967 CXCL9Q07325 125 aa10.85□□□□□ -0.67
SMARCB1-207ENST00000491967 TSPYL6Q8N831 410 aa10.85□□□□□ -0.67
SMARCB1-207ENST00000491967 CCDC191Q8NCU4 936 aa10.85□□□□□ -0.67
SMARCB1-207ENST00000491967 PGAP2Q9UHJ9 254 aa10.85□□□□□ -0.67
SMARCB1-207ENST00000491967 ELL2O00472 640 aaPredicted RBP10.84□□□□□ -0.67
SMARCB1-207ENST00000491967 IRS4O14654 1257 aaPredicted RBP10.84□□□□□ -0.67
SMARCB1-207ENST00000491967 TCERG1O14776 1098 aaKnown RBP10.84□□□□□ -0.67
SMARCB1-207ENST00000491967 AOC3Q16853 763 aa10.84□□□□□ -0.67
SMARCB1-207ENST00000491967 CCDC30Q5VVM6 783 aa10.84□□□□□ -0.67
SMARCB1-207ENST00000491967 DPP8Q6V1X1 898 aaPredicted RBP10.84□□□□□ -0.67
SMARCB1-207ENST00000491967 USP50Q70EL3 339 aaPredicted RBP10.84□□□□□ -0.67
SMARCB1-207ENST00000491967 NIM1KQ8IY84 436 aa10.84□□□□□ -0.67
SMARCB1-207ENST00000491967 CNTROBQ8N137 903 aa10.84□□□□□ -0.67
SMARCB1-207ENST00000491967 CELF1Q92879 486 aaKnown RBP10.84□□□□□ -0.67
SMARCB1-207ENST00000491967 METTL22Q9BUU2 404 aaPredicted RBP10.84□□□□□ -0.67
SMARCB1-207ENST00000491967 TMX4Q9H1E5 349 aaPredicted RBP10.84□□□□□ -0.67
SMARCB1-207ENST00000491967 GPRC5DQ9NZD1 345 aa10.84□□□□□ -0.67
SMARCB1-207ENST00000491967 CDHR2Q9BYE9 1310 aa10.84□□□□□ -0.67
SMARCB1-207ENST00000491967 CNTNAP1P78357 1384 aa10.83□□□□□ -0.68
SMARCB1-207ENST00000491967 TMEM88BA6NKF7 163 aa10.83□□□□□ -0.68
SMARCB1-207ENST00000491967 PCCAP05165 728 aaPredicted RBP10.83□□□□□ -0.68
SMARCB1-207ENST00000491967 RPS8P62241 208 aaKnown RBP10.83□□□□□ -0.68
SMARCB1-207ENST00000491967 GOLGA2Q08379 1002 aa10.83□□□□□ -0.68
SMARCB1-207ENST00000491967 EAPPQ56P03 285 aaPredicted RBP10.83□□□□□ -0.68
SMARCB1-207ENST00000491967 RIC3Q7Z5B4 369 aa10.83□□□□□ -0.68
SMARCB1-207ENST00000491967 TRPM7Q96QT4 1865 aa10.83□□□□□ -0.68
SMARCB1-207ENST00000491967 RASSF10A6NK89 507 aa10.82□□□□□ -0.68
SMARCB1-207ENST00000491967 YDJCA8MPS7 323 aa10.82□□□□□ -0.68
SMARCB1-207ENST00000491967 HSP90B1P14625 803 aaKnown RBP10.82□□□□□ -0.68
SMARCB1-207ENST00000491967 MAP1SQ66K74 1059 aaPredicted RBP10.82□□□□□ -0.68
SMARCB1-207ENST00000491967 KSR2Q6VAB6 950 aa10.82□□□□□ -0.68
SMARCB1-207ENST00000491967 PODXL2Q9NZ53 605 aa10.82□□□□□ -0.68
SMARCB1-207ENST00000491967 POLLQ9UGP5 575 aa10.82□□□□□ -0.68
SMARCB1-207ENST00000491967 GJA3Q9Y6H8 435 aa10.82□□□□□ -0.68
SMARCB1-207ENST00000491967 ZNF316A6NFI3 1004 aaPredicted RBP10.81□□□□□ -0.68
SMARCB1-207ENST00000491967 SLC34A2O95436 690 aa10.81□□□□□ -0.68
SMARCB1-207ENST00000491967 IGKV5-2P06315 115 aa10.81□□□□□ -0.68
SMARCB1-207ENST00000491967 LMOD1P29536 600 aaPredicted RBP10.81□□□□□ -0.68
SMARCB1-207ENST00000491967 TNIP1Q15025 636 aa10.81□□□□□ -0.68
SMARCB1-207ENST00000491967 COL13A1Q5TAT6 717 aaPredicted RBP10.81□□□□□ -0.68
SMARCB1-207ENST00000491967 CIAPIN1Q6FI81 312 aa10.81□□□□□ -0.68
SMARCB1-207ENST00000491967 ZC3H15Q8WU90 426 aaKnown RBP10.81□□□□□ -0.68
SMARCB1-207ENST00000491967 DPF2Q92785 391 aa10.81□□□□□ -0.68
SMARCB1-207ENST00000491967 ADARB2Q9NS39 739 aaKnown RBP10.81□□□□□ -0.68
SMARCB1-207ENST00000491967 CWC25Q9NXE8 425 aaPredicted RBP10.81□□□□□ -0.68
SMARCB1-207ENST00000491967 MYH3P11055 1940 aa10.8□□□□□ -0.68
SMARCB1-207ENST00000491967 SCN9AQ15858 1988 aa10.8□□□□□ -0.68
SMARCB1-207ENST00000491967 PDE8AO60658 829 aa10.8□□□□□ -0.68
SMARCB1-207ENST00000491967 DDX58O95786 925 aaKnown RBP10.8□□□□□ -0.68
SMARCB1-207ENST00000491967 GMPSP49915 693 aaPredicted RBP10.8□□□□□ -0.68
SMARCB1-207ENST00000491967 HIRAP54198 1017 aaPredicted RBP10.8□□□□□ -0.68
SMARCB1-207ENST00000491967 GPSM2P81274 684 aa10.8□□□□□ -0.68
SMARCB1-207ENST00000491967 CST9Q5W186 159 aa10.8□□□□□ -0.68
SMARCB1-207ENST00000491967 WDR63Q8IWG1 891 aa10.8□□□□□ -0.68
SMARCB1-207ENST00000491967 TSR2Q969E8 191 aaKnown RBP10.8□□□□□ -0.68
SMARCB1-207ENST00000491967 ZNF428Q96B54 188 aa10.8□□□□□ -0.68
SMARCB1-207ENST00000491967 MYD88Q99836 296 aa10.8□□□□□ -0.68
SMARCB1-207ENST00000491967 CLEC11AQ9Y240 323 aa10.8□□□□□ -0.68
SMARCB1-207ENST00000491967 MAP3K2Q9Y2U5 619 aa10.8□□□□□ -0.68
SMARCB1-207ENST00000491967 POLR2AP24928 1970 aaKnown RBP10.79□□□□□ -0.68
SMARCB1-207ENST00000491967 ZNF609O15014 1411 aa10.79□□□□□ -0.68
SMARCB1-207ENST00000491967 PI4KAP2A4QPH2 592 aa10.79□□□□□ -0.68
SMARCB1-207ENST00000491967 H7C1W4 665 aa10.79□□□□□ -0.68
SMARCB1-207ENST00000491967 HSPA1AP0DMV8 641 aaKnown RBP10.79□□□□□ -0.68
SMARCB1-207ENST00000491967 HSPA1BP0DMV9 641 aaKnown RBP10.79□□□□□ -0.68
SMARCB1-207ENST00000491967 VEGFBP49765 207 aa10.79□□□□□ -0.68
SMARCB1-207ENST00000491967 WASHC4Q2M389 1173 aa10.79□□□□□ -0.68
SMARCB1-207ENST00000491967 TWISTNBQ3B726 338 aaPredicted RBP10.79□□□□□ -0.68
SMARCB1-207ENST00000491967 RTL5Q5HYW3 569 aaPredicted RBP10.79□□□□□ -0.68
SMARCB1-207ENST00000491967 PI4KAP1Q8N8J0 262 aa10.79□□□□□ -0.68
SMARCB1-207ENST00000491967 TBC1D16Q8TBP0 767 aa10.79□□□□□ -0.68
SMARCB1-207ENST00000491967 SEC31BQ9NQW1 1179 aa10.79□□□□□ -0.68
SMARCB1-207ENST00000491967 MKRN1Q9UHC7 482 aaKnown RBP10.79□□□□□ -0.68
SMARCB1-207ENST00000491967 NSFL1CQ9UNZ2 370 aaKnown RBP10.79□□□□□ -0.68
SMARCB1-207ENST00000491967 PSME4Q14997 1843 aa10.79□□□□□ -0.68
SMARCB1-207ENST00000491967 RTL9Q8NET4 1388 aa10.78□□□□□ -0.68
SMARCB1-207ENST00000491967 VAMP4O75379 141 aa10.78□□□□□ -0.68
SMARCB1-207ENST00000491967 RAD17O75943 681 aa10.78□□□□□ -0.68
SMARCB1-207ENST00000491967 CCDC152Q4G0S7 254 aa10.78□□□□□ -0.68
SMARCB1-207ENST00000491967 G2E3Q7L622 706 aa10.78□□□□□ -0.68
SMARCB1-207ENST00000491967 TTLL11Q8NHH1 800 aa10.78□□□□□ -0.68
SMARCB1-207ENST00000491967 MRS2Q9HD23 443 aa10.78□□□□□ -0.68
SMARCB1-207ENST00000491967 WBP1LQ9NX94 342 aa10.78□□□□□ -0.68
SMARCB1-207ENST00000491967 THSD7BQ9C0I4 1608 aa10.77□□□□□ -0.68
SMARCB1-207ENST00000491967 NEURL1BA8MQ27 555 aa10.77□□□□□ -0.69
SMARCB1-207ENST00000491967 PSMD14O00487 310 aa10.77□□□□□ -0.69
SMARCB1-207ENST00000491967 ANP32CO43423 234 aa10.77□□□□□ -0.69
SMARCB1-207ENST00000491967 SLC4A2P04920 1241 aa10.77□□□□□ -0.69
SMARCB1-207ENST00000491967 VIL1P09327 827 aaKnown RBP10.77□□□□□ -0.69
SMARCB1-207ENST00000491967 RPS12P25398 132 aaKnown RBP10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms