RNA–Protein interactions for RNA: ENST00000491521.1

CDK9-204, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-204ENST00000491521 PPIP5K2O43314 1243 aa17.41■□□□□ 0.38
CDK9-204ENST00000491521 EIF6P56537 245 aaKnown RBP17.41■□□□□ 0.38
CDK9-204ENST00000491521 GRAPQ13588 217 aa17.41■□□□□ 0.38
CDK9-204ENST00000491521 AOC3Q16853 763 aa17.41■□□□□ 0.38
CDK9-204ENST00000491521 TWISTNBQ3B726 338 aaPredicted RBP17.41■□□□□ 0.38
CDK9-204ENST00000491521 GRAPLQ8TC17 118 aaPredicted RBP17.41■□□□□ 0.38
CDK9-204ENST00000491521 JARID2Q92833 1246 aaPredicted RBP17.41■□□□□ 0.38
CDK9-204ENST00000491521 FZD9O00144 591 aa17.4■□□□□ 0.38
CDK9-204ENST00000491521 IRS4O14654 1257 aaPredicted RBP17.4■□□□□ 0.38
CDK9-204ENST00000491521 BBOX1O75936 387 aa17.4■□□□□ 0.38
CDK9-204ENST00000491521 GRIPAP1Q4V328 841 aa17.4■□□□□ 0.38
CDK9-204ENST00000491521 DPP8Q6V1X1 898 aaPredicted RBP17.4■□□□□ 0.38
CDK9-204ENST00000491521 NIM1KQ8IY84 436 aa17.4■□□□□ 0.38
CDK9-204ENST00000491521 L3MBTL3Q96JM7 780 aaPredicted RBP17.4■□□□□ 0.38
CDK9-204ENST00000491521 TAF1DQ9H5J8 278 aaPredicted RBP17.4■□□□□ 0.38
CDK9-204ENST00000491521 SCN4AP35499 1836 aa17.4■□□□□ 0.38
CDK9-204ENST00000491521 PCNTO95613 3336 aa17.39■□□□□ 0.38
CDK9-204ENST00000491521 DDX58O95786 925 aaKnown RBP17.39■□□□□ 0.37
CDK9-204ENST00000491521 CHADLQ6NUI6 762 aa17.39■□□□□ 0.37
CDK9-204ENST00000491521 DNAJC5GQ8N7S2 189 aa17.39■□□□□ 0.37
CDK9-204ENST00000491521 STK31Q9BXU1 1019 aa17.39■□□□□ 0.37
CDK9-204ENST00000491521 HACL1Q9UJ83 578 aa17.39■□□□□ 0.37
CDK9-204ENST00000491521 CLEC11AQ9Y240 323 aa17.39■□□□□ 0.37
CDK9-204ENST00000491521 SP8Q8IXZ3 490 aa17.38■□□□□ 0.37
CDK9-204ENST00000491521 GPC2Q8N158 579 aa17.38■□□□□ 0.37
CDK9-204ENST00000491521 MPNDQ8N594 471 aa17.38■□□□□ 0.37
CDK9-204ENST00000491521 CHMP4AQ9BY43 222 aa17.38■□□□□ 0.37
CDK9-204ENST00000491521 RCAN3Q9UKA8 241 aa17.38■□□□□ 0.37
CDK9-204ENST00000491521 MAP3K2Q9Y2U5 619 aa17.38■□□□□ 0.37
CDK9-204ENST00000491521 VAMP4O75379 141 aa17.37■□□□□ 0.37
CDK9-204ENST00000491521 CT47B1P0C2W7 299 aaPredicted RBP17.37■□□□□ 0.37
CDK9-204ENST00000491521 EPHX2P34913 555 aa17.37■□□□□ 0.37
CDK9-204ENST00000491521 TRIM28Q13263 835 aaKnown RBP17.37■□□□□ 0.37
CDK9-204ENST00000491521 SUPT20HQ8NEM7 779 aa17.37■□□□□ 0.37
CDK9-204ENST00000491521 CELF1Q92879 486 aaKnown RBP17.37■□□□□ 0.37
CDK9-204ENST00000491521 CCDC85AQ96PX6 553 aaPredicted RBP17.37■□□□□ 0.37
CDK9-204ENST00000491521 LDHDQ86WU2 507 aa17.36■□□□□ 0.37
CDK9-204ENST00000491521 ZBTB38Q8NAP3 1195 aaPredicted RBP17.36■□□□□ 0.37
CDK9-204ENST00000491521 KLRG1Q96E93 195 aa17.36■□□□□ 0.37
CDK9-204ENST00000491521 METTL22Q9BUU2 404 aaPredicted RBP17.36■□□□□ 0.37
CDK9-204ENST00000491521 CWC25Q9NXE8 425 aaPredicted RBP17.36■□□□□ 0.37
CDK9-204ENST00000491521 COL4A1P02462 1669 aa17.36■□□□□ 0.37
CDK9-204ENST00000491521 PI4KAP2A4QPH2 592 aa17.35■□□□□ 0.37
CDK9-204ENST00000491521 LMOD1P29536 600 aaPredicted RBP17.35■□□□□ 0.37
CDK9-204ENST00000491521 SF3B3Q15393 1217 aaKnown RBP17.35■□□□□ 0.37
CDK9-204ENST00000491521 G2E3Q7L622 706 aa17.35■□□□□ 0.37
CDK9-204ENST00000491521 PI4KAP1Q8N8J0 262 aa17.35■□□□□ 0.37
CDK9-204ENST00000491521 SLC4A2P04920 1241 aa17.34■□□□□ 0.37
CDK9-204ENST00000491521 KSR2Q6VAB6 950 aa17.34■□□□□ 0.37
CDK9-204ENST00000491521 CCDC191Q8NCU4 936 aa17.34■□□□□ 0.37
CDK9-204ENST00000491521 PCCAP05165 728 aaPredicted RBP17.33■□□□□ 0.36
CDK9-204ENST00000491521 TMC4Q7Z404 712 aa17.33■□□□□ 0.36
CDK9-204ENST00000491521 RTFDC1Q9BY42 306 aaPredicted RBP17.33■□□□□ 0.36
CDK9-204ENST00000491521 SEC31BQ9NQW1 1179 aa17.33■□□□□ 0.36
CDK9-204ENST00000491521 ZNRF3Q9ULT6 936 aa17.33■□□□□ 0.36
CDK9-204ENST00000491521 NSFL1CQ9UNZ2 370 aaKnown RBP17.33■□□□□ 0.36
CDK9-204ENST00000491521 C6orf229H3BNL8 230 aa17.32■□□□□ 0.36
CDK9-204ENST00000491521 RIMBP2O15034 1052 aa17.32■□□□□ 0.36
CDK9-204ENST00000491521 RAD17O75943 681 aa17.32■□□□□ 0.36
CDK9-204ENST00000491521 EPS15P42566 896 aa17.32■□□□□ 0.36
CDK9-204ENST00000491521 RARSP54136 660 aaKnown RBP17.32■□□□□ 0.36
CDK9-204ENST00000491521 GPSM2P81274 684 aa17.32■□□□□ 0.36
CDK9-204ENST00000491521 NEXNQ0ZGT2 675 aa17.32■□□□□ 0.36
CDK9-204ENST00000491521 MAP1SQ66K74 1059 aaPredicted RBP17.32■□□□□ 0.36
CDK9-204ENST00000491521 GPR101Q96P66 508 aaPredicted RBP17.32■□□□□ 0.36
CDK9-204ENST00000491521 BCL2L13Q9BXK5 485 aa17.32■□□□□ 0.36
CDK9-204ENST00000491521 SMC4Q9NTJ3 1288 aa17.32■□□□□ 0.36
CDK9-204ENST00000491521 SUPT16HQ9Y5B9 1047 aaKnown RBP17.32■□□□□ 0.36
CDK9-204ENST00000491521 LRRC37AA6NMS7 1700 aa17.32■□□□□ 0.36
CDK9-204ENST00000491521 LTBP1Q14766 1721 aa17.32■□□□□ 0.36
CDK9-204ENST00000491521 IGKV5-2P06315 115 aa17.31■□□□□ 0.36
CDK9-204ENST00000491521 HSP90B1P14625 803 aaKnown RBP17.31■□□□□ 0.36
CDK9-204ENST00000491521 SCNN1DP51172 638 aa17.31■□□□□ 0.36
CDK9-204ENST00000491521 RPS8P62241 208 aaKnown RBP17.31■□□□□ 0.36
CDK9-204ENST00000491521 CXCL9Q07325 125 aa17.31■□□□□ 0.36
CDK9-204ENST00000491521 KIAA2012Q0VF49 1180 aa17.31■□□□□ 0.36
CDK9-204ENST00000491521 CWF19L2Q2TBE0 894 aaKnown RBP17.31■□□□□ 0.36
CDK9-204ENST00000491521 CCDC152Q4G0S7 254 aa17.31■□□□□ 0.36
CDK9-204ENST00000491521 PNMA8AQ86V59 439 aaPredicted RBP17.31■□□□□ 0.36
CDK9-204ENST00000491521 VPS33BQ9H267 617 aa17.31■□□□□ 0.36
CDK9-204ENST00000491521 DUOX1Q9NRD9 1551 aa17.31■□□□□ 0.36
CDK9-204ENST00000491521 PDE8AO60658 829 aa17.3■□□□□ 0.36
CDK9-204ENST00000491521 BCAR3O75815 825 aa17.3■□□□□ 0.36
CDK9-204ENST00000491521 FLIIQ13045 1269 aa17.3■□□□□ 0.36
CDK9-204ENST00000491521 FKBP5Q13451 457 aaPredicted RBP17.3■□□□□ 0.36
CDK9-204ENST00000491521 ALDH1L2Q3SY69 923 aa17.3■□□□□ 0.36
CDK9-204ENST00000491521 SSH1Q8WYL5 1049 aa17.3■□□□□ 0.36
CDK9-204ENST00000491521 GMPSP49915 693 aaPredicted RBP17.29■□□□□ 0.36
CDK9-204ENST00000491521 WASHC4Q2M389 1173 aa17.29■□□□□ 0.36
CDK9-204ENST00000491521 CIAPIN1Q6FI81 312 aa17.29■□□□□ 0.36
CDK9-204ENST00000491521 MKRN1Q9UHC7 482 aaKnown RBP17.29■□□□□ 0.36
CDK9-204ENST00000491521 ADAMTSL1Q8N6G6 1762 aa17.28■□□□□ 0.36
CDK9-204ENST00000491521 NEURL1BA8MQ27 555 aa17.28■□□□□ 0.36
CDK9-204ENST00000491521 DOK7Q18PE1 504 aa17.28■□□□□ 0.36
CDK9-204ENST00000491521 CNTROBQ8N137 903 aa17.28■□□□□ 0.36
CDK9-204ENST00000491521 FRAT1Q92837 279 aaPredicted RBP17.28■□□□□ 0.36
CDK9-204ENST00000491521 DBNDD1Q9H9R9 158 aa17.28■□□□□ 0.36
CDK9-204ENST00000491521 ANKIB1Q9P2G1 1089 aa17.28■□□□□ 0.36
CDK9-204ENST00000491521 POLLQ9UGP5 575 aa17.28■□□□□ 0.36
CDK9-204ENST00000491521 SPEF2Q9C093 1822 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms