RNA–Protein interactions for RNA: ENST00000491502.1

NUP188-208, Transcript of nucleoporin 188, humanhuman

TSL 3

Gene NUP188, Length 534 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-208ENST00000491502 ZC3H4Q9UPT8 1303 aaKnown RBP16.9■□□□□ 0.3
NUP188-208ENST00000491502 SLX4Q8IY92 1834 aa16.89■□□□□ 0.29
NUP188-208ENST00000491502 SBF1O95248 1867 aa16.89■□□□□ 0.29
NUP188-208ENST00000491502 NFKBIEO00221 500 aa16.89■□□□□ 0.29
NUP188-208ENST00000491502 ZBTB7BO15156 539 aaPredicted RBP16.89■□□□□ 0.29
NUP188-208ENST00000491502 CCDC93Q567U6 631 aa16.89■□□□□ 0.29
NUP188-208ENST00000491502 RTKN2Q8IZC4 609 aa16.89■□□□□ 0.29
NUP188-208ENST00000491502 ARFGEF2Q9Y6D5 1785 aa16.89■□□□□ 0.29
NUP188-208ENST00000491502 GNAI3P08754 354 aa16.88■□□□□ 0.29
NUP188-208ENST00000491502 HSP90B1P14625 803 aaKnown RBP16.88■□□□□ 0.29
NUP188-208ENST00000491502 GRIPAP1Q4V328 841 aa16.88■□□□□ 0.29
NUP188-208ENST00000491502 CC2D2BQ6DHV5 1058 aa16.88■□□□□ 0.29
NUP188-208ENST00000491502 KSR2Q6VAB6 950 aa16.88■□□□□ 0.29
NUP188-208ENST00000491502 ZNF526Q8TF50 670 aaPredicted RBP16.88■□□□□ 0.29
NUP188-208ENST00000491502 DNAAF4Q8WXU2 420 aa16.88■□□□□ 0.29
NUP188-208ENST00000491502 TAOK3Q9H2K8 898 aa16.88■□□□□ 0.29
NUP188-208ENST00000491502 ATP5J2-PTCD1G3V325 749 aa16.87■□□□□ 0.29
NUP188-208ENST00000491502 NEXNQ0ZGT2 675 aa16.87■□□□□ 0.29
NUP188-208ENST00000491502 SRCIN1Q9C0H9 1055 aa16.87■□□□□ 0.29
NUP188-208ENST00000491502 HCLS1P14317 486 aaPredicted RBP16.86■□□□□ 0.29
NUP188-208ENST00000491502 CCDC191Q8NCU4 936 aa16.86■□□□□ 0.29
NUP188-208ENST00000491502 MYD88Q99836 296 aa16.86■□□□□ 0.29
NUP188-208ENST00000491502 METTL22Q9BUU2 404 aaPredicted RBP16.86■□□□□ 0.29
NUP188-208ENST00000491502 TMX4Q9H1E5 349 aaPredicted RBP16.86■□□□□ 0.29
NUP188-208ENST00000491502 KDM2BQ8NHM5 1336 aa16.86■□□□□ 0.29
NUP188-208ENST00000491502 FER1L6Q2WGJ9 1857 aa16.86■□□□□ 0.29
NUP188-208ENST00000491502 CACNA1SQ13698 1873 aa16.85■□□□□ 0.29
NUP188-208ENST00000491502 PI4KAP2A4QPH2 592 aa16.85■□□□□ 0.29
NUP188-208ENST00000491502 ALDH1L1O75891 902 aa16.85■□□□□ 0.29
NUP188-208ENST00000491502 C1QTNF8P60827 252 aa16.85■□□□□ 0.29
NUP188-208ENST00000491502 PI4KAP1Q8N8J0 262 aa16.85■□□□□ 0.29
NUP188-208ENST00000491502 TNRC6CQ9HCJ0 1690 aaKnown RBP16.85■□□□□ 0.29
NUP188-208ENST00000491502 F6X3S4 739 aa16.84■□□□□ 0.29
NUP188-208ENST00000491502 BBOX1O75936 387 aa16.84■□□□□ 0.29
NUP188-208ENST00000491502 PRELPP51888 382 aa16.84■□□□□ 0.29
NUP188-208ENST00000491502 FKBP4Q02790 459 aaKnown RBP eCLIP16.84■□□□□ 0.29
NUP188-208ENST00000491502 HDAC1Q13547 482 aaPredicted RBP16.84■□□□□ 0.29
NUP188-208ENST00000491502 C3orf67Q6ZVT6 689 aa16.84■□□□□ 0.29
NUP188-208ENST00000491502 DDX46Q7L014 1031 aaKnown RBP16.84■□□□□ 0.29
NUP188-208ENST00000491502 SYNE4Q8N205 404 aa16.84■□□□□ 0.29
NUP188-208ENST00000491502 ZBTB38Q8NAP3 1195 aaPredicted RBP16.84■□□□□ 0.29
NUP188-208ENST00000491502 FAM89AQ96GI7 184 aa16.84■□□□□ 0.29
NUP188-208ENST00000491502 MAP3K2Q9Y2U5 619 aa16.84■□□□□ 0.29
NUP188-208ENST00000491502 CCDC88AQ3V6T2 1871 aa16.84■□□□□ 0.29
NUP188-208ENST00000491502 DPY19L2Q6NUT2 758 aa16.83■□□□□ 0.28
NUP188-208ENST00000491502 RPAP2Q8IXW5 612 aaPredicted RBP16.83■□□□□ 0.28
NUP188-208ENST00000491502 CWC25Q9NXE8 425 aaPredicted RBP16.83■□□□□ 0.28
NUP188-208ENST00000491502 PPEF1O14829 653 aaPredicted RBP16.82■□□□□ 0.28
NUP188-208ENST00000491502 HMMRO75330 724 aa16.82■□□□□ 0.28
NUP188-208ENST00000491502 GNAI2P04899 355 aa16.82■□□□□ 0.28
NUP188-208ENST00000491502 PCCAP05165 728 aaPredicted RBP16.82■□□□□ 0.28
NUP188-208ENST00000491502 SF3B3Q15393 1217 aaKnown RBP16.82■□□□□ 0.28
NUP188-208ENST00000491502 LINS1Q8NG48 757 aa16.82■□□□□ 0.28
NUP188-208ENST00000491502 PSMD1Q99460 953 aa16.82■□□□□ 0.28
NUP188-208ENST00000491502 PCDHB15Q9Y5E8 787 aa16.82■□□□□ 0.28
NUP188-208ENST00000491502 GLTPD2A6NH11 291 aa16.81■□□□□ 0.28
NUP188-208ENST00000491502 IRS4O14654 1257 aaPredicted RBP16.81■□□□□ 0.28
NUP188-208ENST00000491502 KIF3CO14782 793 aa16.81■□□□□ 0.28
NUP188-208ENST00000491502 BEND3Q5T5X7 828 aa16.81■□□□□ 0.28
NUP188-208ENST00000491502 TMC4Q7Z404 712 aa16.81■□□□□ 0.28
NUP188-208ENST00000491502 ATP6V0A2Q9Y487 856 aa16.81■□□□□ 0.28
NUP188-208ENST00000491502 DICER1Q9UPY3 1922 aaKnown RBP16.8■□□□□ 0.28
NUP188-208ENST00000491502 UBTFL1P0CB47 393 aaPredicted RBP16.8■□□□□ 0.28
NUP188-208ENST00000491502 SP8Q8IXZ3 490 aa16.8■□□□□ 0.28
NUP188-208ENST00000491502 GRAPQ13588 217 aa16.79■□□□□ 0.28
NUP188-208ENST00000491502 RTL5Q5HYW3 569 aaPredicted RBP16.79■□□□□ 0.28
NUP188-208ENST00000491502 OLFM4Q6UX06 510 aa16.79■□□□□ 0.28
NUP188-208ENST00000491502 GRAPLQ8TC17 118 aaPredicted RBP16.79■□□□□ 0.28
NUP188-208ENST00000491502 NMRK2Q9NPI5 230 aa16.79■□□□□ 0.28
NUP188-208ENST00000491502 PDE8AO60658 829 aa16.78■□□□□ 0.28
NUP188-208ENST00000491502 IARSP41252 1262 aaKnown RBP16.78■□□□□ 0.28
NUP188-208ENST00000491502 C16orf71Q8IYS4 520 aaPredicted RBP16.78■□□□□ 0.28
NUP188-208ENST00000491502 GCC1Q96CN9 775 aa16.78■□□□□ 0.28
NUP188-208ENST00000491502 VPS33BQ9H267 617 aa16.78■□□□□ 0.28
NUP188-208ENST00000491502 RRAGCQ9HB90 399 aa16.78■□□□□ 0.28
NUP188-208ENST00000491502 ZNF277Q9NRM2 450 aaPredicted RBP16.78■□□□□ 0.28
NUP188-208ENST00000491502 C9orf78Q9NZ63 289 aaPredicted RBP16.78■□□□□ 0.28
NUP188-208ENST00000491502 CDHR2Q9BYE9 1310 aa16.77■□□□□ 0.28
NUP188-208ENST00000491502 TOMM70O94826 608 aa16.77■□□□□ 0.28
NUP188-208ENST00000491502 IGKV5-2P06315 115 aa16.77■□□□□ 0.28
NUP188-208ENST00000491502 SUPT20HQ8NEM7 779 aa16.77■□□□□ 0.28
NUP188-208ENST00000491502 MEIS3Q99687 375 aa16.77■□□□□ 0.28
NUP188-208ENST00000491502 ZBTB47Q9UFB7 747 aaPredicted RBP16.77■□□□□ 0.28
NUP188-208ENST00000491502 LAMB2P55268 1798 aa16.77■□□□□ 0.27
NUP188-208ENST00000491502 NEURL1BA8MQ27 555 aa16.76■□□□□ 0.27
NUP188-208ENST00000491502 IGHDP01880 384 aa16.76■□□□□ 0.27
NUP188-208ENST00000491502 VEGFAP15692 232 aaPredicted RBP16.76■□□□□ 0.27
NUP188-208ENST00000491502 CCDC152Q4G0S7 254 aa16.76■□□□□ 0.27
NUP188-208ENST00000491502 ANKRD44Q8N8A2 993 aa16.76■□□□□ 0.27
NUP188-208ENST00000491502 JDP2Q8WYK2 163 aa16.76■□□□□ 0.27
NUP188-208ENST00000491502 DDX60Q8IY21 1712 aaKnown RBP16.76■□□□□ 0.27
NUP188-208ENST00000491502 MPNDQ8N594 471 aa16.75■□□□□ 0.27
NUP188-208ENST00000491502 USP44Q9H0E7 712 aa16.75■□□□□ 0.27
NUP188-208ENST00000491502 SNED1Q8TER0 1413 aa16.75■□□□□ 0.27
NUP188-208ENST00000491502 TIAM2Q8IVF5 1701 aa16.75■□□□□ 0.27
NUP188-208ENST00000491502 H7C1W4 665 aa16.74■□□□□ 0.27
NUP188-208ENST00000491502 RPS8P62241 208 aaKnown RBP16.74■□□□□ 0.27
NUP188-208ENST00000491502 GCKRQ14397 625 aa16.74■□□□□ 0.27
NUP188-208ENST00000491502 CWF19L2Q2TBE0 894 aaKnown RBP16.74■□□□□ 0.27
NUP188-208ENST00000491502 DPP8Q6V1X1 898 aaPredicted RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms