RNA–Protein interactions for RNA: ENST00000491382.1

PFDN6-207, Transcript of prefoldin subunit 6, humanhuman

TSL 2

Gene PFDN6, Length 989 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-207ENST00000491382 SNED1Q8TER0 1413 aa20.41■□□□□ 0.86
PFDN6-207ENST00000491382 CCDC152Q4G0S7 254 aa20.39■□□□□ 0.85
PFDN6-207ENST00000491382 DPY19L2Q6NUT2 758 aa20.39■□□□□ 0.85
PFDN6-207ENST00000491382 SP8Q8IXZ3 490 aa20.39■□□□□ 0.85
PFDN6-207ENST00000491382 TRMT2AQ8IZ69 625 aaKnown RBP20.39■□□□□ 0.85
PFDN6-207ENST00000491382 ZNF277Q9NRM2 450 aaPredicted RBP20.39■□□□□ 0.85
PFDN6-207ENST00000491382 LRRC37AA6NMS7 1700 aa20.39■□□□□ 0.85
PFDN6-207ENST00000491382 GLTPD2A6NH11 291 aa20.38■□□□□ 0.85
PFDN6-207ENST00000491382 CT47B1P0C2W7 299 aaPredicted RBP20.38■□□□□ 0.85
PFDN6-207ENST00000491382 GCKRQ14397 625 aa20.38■□□□□ 0.85
PFDN6-207ENST00000491382 F6X3S4 739 aa20.37■□□□□ 0.85
PFDN6-207ENST00000491382 IARSP41252 1262 aaKnown RBP20.37■□□□□ 0.85
PFDN6-207ENST00000491382 HNRNPUQ00839 825 aaKnown RBP eCLIP20.37■□□□□ 0.85
PFDN6-207ENST00000491382 UBE3BQ7Z3V4 1068 aa20.37■□□□□ 0.85
PFDN6-207ENST00000491382 JARID2Q92833 1246 aaPredicted RBP20.37■□□□□ 0.85
PFDN6-207ENST00000491382 ALDH1L2Q3SY69 923 aa20.36■□□□□ 0.85
PFDN6-207ENST00000491382 SUPT20HQ8NEM7 779 aa20.36■□□□□ 0.85
PFDN6-207ENST00000491382 NMRK2Q9NPI5 230 aa20.36■□□□□ 0.85
PFDN6-207ENST00000491382 PTPRCP08575 1304 aa20.35■□□□□ 0.85
PFDN6-207ENST00000491382 H7C1W4 665 aa20.35■□□□□ 0.85
PFDN6-207ENST00000491382 CTSWP56202 376 aa20.35■□□□□ 0.85
PFDN6-207ENST00000491382 C1QTNF8P60827 252 aa20.35■□□□□ 0.85
PFDN6-207ENST00000491382 DPP8Q6V1X1 898 aaPredicted RBP20.35■□□□□ 0.85
PFDN6-207ENST00000491382 MPNDQ8N594 471 aa20.35■□□□□ 0.85
PFDN6-207ENST00000491382 MRPL50Q8N5N7 158 aaKnown RBP20.35■□□□□ 0.85
PFDN6-207ENST00000491382 JDP2Q8WYK2 163 aa20.35■□□□□ 0.85
PFDN6-207ENST00000491382 SSH1Q8WYL5 1049 aa20.35■□□□□ 0.85
PFDN6-207ENST00000491382 CELF1Q92879 486 aaKnown RBP20.35■□□□□ 0.85
PFDN6-207ENST00000491382 KIF3CO14782 793 aa20.34■□□□□ 0.85
PFDN6-207ENST00000491382 BEND3Q5T5X7 828 aa20.34■□□□□ 0.85
PFDN6-207ENST00000491382 VPS33BQ9H267 617 aa20.34■□□□□ 0.85
PFDN6-207ENST00000491382 WDR90Q96KV7 1748 aa20.33■□□□□ 0.85
PFDN6-207ENST00000491382 RPS8P62241 208 aaKnown RBP20.33■□□□□ 0.85
PFDN6-207ENST00000491382 SLC4A10Q6U841 1118 aa20.33■□□□□ 0.85
PFDN6-207ENST00000491382 C16orf71Q8IYS4 520 aaPredicted RBP20.33■□□□□ 0.85
PFDN6-207ENST00000491382 SMC4Q9NTJ3 1288 aa20.33■□□□□ 0.85
PFDN6-207ENST00000491382 SLC51AQ86UW1 340 aa20.32■□□□□ 0.84
PFDN6-207ENST00000491382 LARGE2Q8N3Y3 721 aa20.32■□□□□ 0.84
PFDN6-207ENST00000491382 CCDC85AQ96PX6 553 aaPredicted RBP20.32■□□□□ 0.84
PFDN6-207ENST00000491382 CDC5LQ99459 802 aaKnown RBP20.32■□□□□ 0.84
PFDN6-207ENST00000491382 PLA2G12BQ9BX93 195 aa20.32■□□□□ 0.84
PFDN6-207ENST00000491382 BCL2L13Q9BXK5 485 aa20.32■□□□□ 0.84
PFDN6-207ENST00000491382 RTFDC1Q9BY42 306 aaPredicted RBP20.32■□□□□ 0.84
PFDN6-207ENST00000491382 SRCIN1Q9C0H9 1055 aa20.32■□□□□ 0.84
PFDN6-207ENST00000491382 RRAGCQ9HB90 399 aa20.32■□□□□ 0.84
PFDN6-207ENST00000491382 SEC31BQ9NQW1 1179 aa20.32■□□□□ 0.84
PFDN6-207ENST00000491382 PPIP5K2O43314 1243 aa20.31■□□□□ 0.84
PFDN6-207ENST00000491382 ALDH1L1O75891 902 aa20.31■□□□□ 0.84
PFDN6-207ENST00000491382 TTLL11Q8NHH1 800 aa20.31■□□□□ 0.84
PFDN6-207ENST00000491382 COL4A1P02462 1669 aa20.31■□□□□ 0.84
PFDN6-207ENST00000491382 RTL9Q8NET4 1388 aa20.31■□□□□ 0.84
PFDN6-207ENST00000491382 SPEF2Q9C093 1822 aa20.3■□□□□ 0.84
PFDN6-207ENST00000491382 TOMM70O94826 608 aa20.3■□□□□ 0.84
PFDN6-207ENST00000491382 VEGFAP15692 232 aaPredicted RBP20.3■□□□□ 0.84
PFDN6-207ENST00000491382 ANKRD18AQ8IVF6 992 aa20.3■□□□□ 0.84
PFDN6-207ENST00000491382 C9orf78Q9NZ63 289 aaPredicted RBP20.3■□□□□ 0.84
PFDN6-207ENST00000491382 FZD9O00144 591 aa20.29■□□□□ 0.84
PFDN6-207ENST00000491382 GRM8O00222 908 aa20.29■□□□□ 0.84
PFDN6-207ENST00000491382 CASP7P55210 303 aa20.29■□□□□ 0.84
PFDN6-207ENST00000491382 NIM1KQ8IY84 436 aa20.29■□□□□ 0.84
PFDN6-207ENST00000491382 NSFL1CQ9UNZ2 370 aaKnown RBP20.29■□□□□ 0.84
PFDN6-207ENST00000491382 DUOX1Q9NRD9 1551 aa20.29■□□□□ 0.84
PFDN6-207ENST00000491382 LTBP1Q14766 1721 aa20.28■□□□□ 0.84
PFDN6-207ENST00000491382 DDNO94850 711 aaPredicted RBP20.28■□□□□ 0.84
PFDN6-207ENST00000491382 EIF6P56537 245 aaKnown RBP20.28■□□□□ 0.84
PFDN6-207ENST00000491382 AOC3Q16853 763 aa20.28■□□□□ 0.84
PFDN6-207ENST00000491382 GREM2Q9H772 168 aa20.28■□□□□ 0.84
PFDN6-207ENST00000491382 ZNF541Q9H0D2 1346 aa20.27■□□□□ 0.84
PFDN6-207ENST00000491382 SCN4AP35499 1836 aa20.27■□□□□ 0.84
PFDN6-207ENST00000491382 COL4A5P29400 1685 aa20.27■□□□□ 0.84
PFDN6-207ENST00000491382 ZBED9Q6R2W3 1325 aa20.27■□□□□ 0.83
PFDN6-207ENST00000491382 KIAA2012Q0VF49 1180 aa20.26■□□□□ 0.83
PFDN6-207ENST00000491382 ANKIB1Q9P2G1 1089 aa20.26■□□□□ 0.83
PFDN6-207ENST00000491382 IQCA1LA6NCM1 817 aa20.25■□□□□ 0.83
PFDN6-207ENST00000491382 C6orf229H3BNL8 230 aa20.25■□□□□ 0.83
PFDN6-207ENST00000491382 CSF1RP07333 972 aa20.25■□□□□ 0.83
PFDN6-207ENST00000491382 IGHMBP2P38935 993 aaKnown RBP20.25■□□□□ 0.83
PFDN6-207ENST00000491382 BRPF1P55201 1214 aaPredicted RBP20.25■□□□□ 0.83
PFDN6-207ENST00000491382 GPSM2P81274 684 aa20.25■□□□□ 0.83
PFDN6-207ENST00000491382 GPC2Q8N158 579 aa20.25■□□□□ 0.83
PFDN6-207ENST00000491382 RBM46Q8TBY0 533 aaKnown RBP20.25■□□□□ 0.83
PFDN6-207ENST00000491382 L3MBTL3Q96JM7 780 aaPredicted RBP20.25■□□□□ 0.83
PFDN6-207ENST00000491382 EYA3Q99504 573 aa20.25■□□□□ 0.83
PFDN6-207ENST00000491382 PODXL2Q9NZ53 605 aa20.25■□□□□ 0.83
PFDN6-207ENST00000491382 KIF16BQ96L93 1317 aa20.25■□□□□ 0.83
PFDN6-207ENST00000491382 ITGA6P23229 1130 aa20.24■□□□□ 0.83
PFDN6-207ENST00000491382 RARSP54136 660 aaKnown RBP20.24■□□□□ 0.83
PFDN6-207ENST00000491382 WASHC4Q2M389 1173 aa20.24■□□□□ 0.83
PFDN6-207ENST00000491382 FAM161AQ3B820 660 aa20.24■□□□□ 0.83
PFDN6-207ENST00000491382 BSDC1Q9NW68 430 aaPredicted RBP20.24■□□□□ 0.83
PFDN6-207ENST00000491382 ZNRF3Q9ULT6 936 aa20.24■□□□□ 0.83
PFDN6-207ENST00000491382 API5Q9BZZ5 524 aaKnown RBP20.23■□□□□ 0.83
PFDN6-207ENST00000491382 CHMP3Q9Y3E7 222 aa20.23■□□□□ 0.83
PFDN6-207ENST00000491382 XDHP47989 1333 aa20.23■□□□□ 0.83
PFDN6-207ENST00000491382 ANKRD18BA2A2Z9 1011 aa20.22■□□□□ 0.83
PFDN6-207ENST00000491382 FOXO4P98177 505 aa20.22■□□□□ 0.83
PFDN6-207ENST00000491382 IFIT5Q13325 482 aaKnown RBP20.22■□□□□ 0.83
PFDN6-207ENST00000491382 TBC1D16Q8TBP0 767 aa20.22■□□□□ 0.83
PFDN6-207ENST00000491382 MPHOSPH8Q99549 860 aa20.22■□□□□ 0.83
PFDN6-207ENST00000491382 POLLQ9UGP5 575 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 112.2 ms