RNA–Protein interactions for RNA: ENST00000490663.1

C4A-256, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 2

Gene C4A, Length 524 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-256ENST00000490663 CCDC93Q567U6 631 aa23.59■■□□□ 1.37
C4A-256ENST00000490663 DDX46Q7L014 1031 aaKnown RBP23.59■■□□□ 1.37
C4A-256ENST00000490663 ZNF526Q8TF50 670 aaPredicted RBP23.59■■□□□ 1.37
C4A-256ENST00000490663 CELF1Q92879 486 aaKnown RBP23.59■■□□□ 1.37
C4A-256ENST00000490663 SEC31BQ9NQW1 1179 aa23.59■■□□□ 1.37
C4A-256ENST00000490663 NOB1Q9ULX3 412 aaKnown RBP23.59■■□□□ 1.37
C4A-256ENST00000490663 PTPRCP08575 1304 aa23.59■■□□□ 1.37
C4A-256ENST00000490663 COL4A5P29400 1685 aa23.58■■□□□ 1.37
C4A-256ENST00000490663 H7C1W4 665 aa23.58■■□□□ 1.37
C4A-256ENST00000490663 PDE8AO60658 829 aa23.58■■□□□ 1.37
C4A-256ENST00000490663 BCAR3O75815 825 aa23.58■■□□□ 1.37
C4A-256ENST00000490663 CASP7P55210 303 aa23.58■■□□□ 1.37
C4A-256ENST00000490663 SF3B3Q15393 1217 aaKnown RBP23.58■■□□□ 1.37
C4A-256ENST00000490663 GRAPQ13588 217 aa23.57■■□□□ 1.36
C4A-256ENST00000490663 ZNF784Q8NCA9 323 aaPredicted RBP23.57■■□□□ 1.36
C4A-256ENST00000490663 GRAPLQ8TC17 118 aaPredicted RBP23.57■■□□□ 1.36
C4A-256ENST00000490663 TAOK3Q9H2K8 898 aa23.57■■□□□ 1.36
C4A-256ENST00000490663 TNNQ9UQP3 1299 aa23.57■■□□□ 1.36
C4A-256ENST00000490663 CTSWP56202 376 aa23.56■■□□□ 1.36
C4A-256ENST00000490663 YTHDC1Q96MU7 727 aaKnown RBP23.56■■□□□ 1.36
C4A-256ENST00000490663 SRCIN1Q9C0H9 1055 aa23.56■■□□□ 1.36
C4A-256ENST00000490663 LMNB1P20700 586 aa23.54■■□□□ 1.36
C4A-256ENST00000490663 SOGA3Q5TF21 947 aa23.54■■□□□ 1.36
C4A-256ENST00000490663 ZNF277Q9NRM2 450 aaPredicted RBP23.54■■□□□ 1.36
C4A-256ENST00000490663 GRM8O00222 908 aa23.53■■□□□ 1.36
C4A-256ENST00000490663 GREM2Q9H772 168 aa23.53■■□□□ 1.36
C4A-256ENST00000490663 ALDH1L1O75891 902 aa23.52■■□□□ 1.36
C4A-256ENST00000490663 FKBP4Q02790 459 aaKnown RBP eCLIP23.52■■□□□ 1.36
C4A-256ENST00000490663 CCDC152Q4G0S7 254 aa23.52■■□□□ 1.36
C4A-256ENST00000490663 EPHA10Q5JZY3 1008 aa23.52■■□□□ 1.36
C4A-256ENST00000490663 TTLL11Q8NHH1 800 aa23.52■■□□□ 1.36
C4A-256ENST00000490663 FRAT1Q92837 279 aaPredicted RBP23.52■■□□□ 1.36
C4A-256ENST00000490663 C9orf78Q9NZ63 289 aaPredicted RBP23.52■■□□□ 1.36
C4A-256ENST00000490663 ATP6V0A2Q9Y487 856 aa23.52■■□□□ 1.36
C4A-256ENST00000490663 SCN9AQ15858 1988 aa23.52■■□□□ 1.36
C4A-256ENST00000490663 LTBP3Q9NS15 1303 aa23.52■■□□□ 1.36
C4A-256ENST00000490663 PSME4Q14997 1843 aa23.52■■□□□ 1.36
C4A-256ENST00000490663 FAM161AQ3B820 660 aa23.51■■□□□ 1.35
C4A-256ENST00000490663 NBPF7P0C2Y1 421 aaPredicted RBP23.5■■□□□ 1.35
C4A-256ENST00000490663 KIF16BQ96L93 1317 aa23.5■■□□□ 1.35
C4A-256ENST00000490663 BBOX1O75936 387 aa23.49■■□□□ 1.35
C4A-256ENST00000490663 HSP90B1P14625 803 aaKnown RBP23.49■■□□□ 1.35
C4A-256ENST00000490663 FOXO4P98177 505 aa23.49■■□□□ 1.35
C4A-256ENST00000490663 RTKN2Q8IZC4 609 aa23.49■■□□□ 1.35
C4A-256ENST00000490663 SUCLG2Q96I99 432 aa23.49■■□□□ 1.35
C4A-256ENST00000490663 CHMP3Q9Y3E7 222 aa23.49■■□□□ 1.35
C4A-256ENST00000490663 BRPF1P55201 1214 aaPredicted RBP23.48■■□□□ 1.35
C4A-256ENST00000490663 SP8Q8IXZ3 490 aa23.48■■□□□ 1.35
C4A-256ENST00000490663 PLA2G12BQ9BX93 195 aa23.48■■□□□ 1.35
C4A-256ENST00000490663 ZNF646O15015 1829 aaPredicted RBP23.47■■□□□ 1.35
C4A-256ENST00000490663 RPS8P62241 208 aaKnown RBP23.47■■□□□ 1.35
C4A-256ENST00000490663 CLUAP1Q96AJ1 413 aa23.47■■□□□ 1.35
C4A-256ENST00000490663 API5Q9BZZ5 524 aaKnown RBP23.47■■□□□ 1.35
C4A-256ENST00000490663 WDR90Q96KV7 1748 aa23.47■■□□□ 1.35
C4A-256ENST00000490663 IARSP41252 1262 aaKnown RBP23.46■■□□□ 1.35
C4A-256ENST00000490663 CC2D2BQ6DHV5 1058 aa23.46■■□□□ 1.35
C4A-256ENST00000490663 GPR101Q96P66 508 aaPredicted RBP23.46■■□□□ 1.35
C4A-256ENST00000490663 MYH13Q9UKX3 1938 aa23.45■■□□□ 1.35
C4A-256ENST00000490663 RTL9Q8NET4 1388 aa23.45■■□□□ 1.34
C4A-256ENST00000490663 TRIM27P14373 513 aa23.45■■□□□ 1.34
C4A-256ENST00000490663 ITGA6P23229 1130 aa23.45■■□□□ 1.34
C4A-256ENST00000490663 GPSM2P81274 684 aa23.45■■□□□ 1.34
C4A-256ENST00000490663 LMBR1LQ6UX01 489 aa23.45■■□□□ 1.34
C4A-256ENST00000490663 DPP8Q6V1X1 898 aaPredicted RBP23.45■■□□□ 1.34
C4A-256ENST00000490663 ANKRD18AQ8IVF6 992 aa23.45■■□□□ 1.34
C4A-256ENST00000490663 MPNDQ8N594 471 aa23.45■■□□□ 1.34
C4A-256ENST00000490663 KAZALD1Q96I82 304 aa23.45■■□□□ 1.34
C4A-256ENST00000490663 PSMD1Q99460 953 aa23.45■■□□□ 1.34
C4A-256ENST00000490663 TMX4Q9H1E5 349 aaPredicted RBP23.45■■□□□ 1.34
C4A-256ENST00000490663 SCN4AP35499 1836 aa23.45■■□□□ 1.34
C4A-256ENST00000490663 AOC3Q16853 763 aa23.44■■□□□ 1.34
C4A-256ENST00000490663 USP44Q9H0E7 712 aa23.44■■□□□ 1.34
C4A-256ENST00000490663 UTYO14607 1347 aa23.43■■□□□ 1.34
C4A-256ENST00000490663 CSF1RP07333 972 aa23.43■■□□□ 1.34
C4A-256ENST00000490663 GPBP1L1Q9HC44 474 aaPredicted RBP23.43■■□□□ 1.34
C4A-256ENST00000490663 NSFL1CQ9UNZ2 370 aaKnown RBP23.43■■□□□ 1.34
C4A-256ENST00000490663 ZNF541Q9H0D2 1346 aa23.42■■□□□ 1.34
C4A-256ENST00000490663 ATF7IPQ6VMQ6 1270 aa23.42■■□□□ 1.34
C4A-256ENST00000490663 ZNF594Q96JF6 807 aaPredicted RBP23.42■■□□□ 1.34
C4A-256ENST00000490663 CDC5LQ99459 802 aaKnown RBP23.42■■□□□ 1.34
C4A-256ENST00000490663 BICC1Q9H694 974 aaKnown RBP23.42■■□□□ 1.34
C4A-256ENST00000490663 NMRK2Q9NPI5 230 aa23.42■■□□□ 1.34
C4A-256ENST00000490663 PPIP5K2O43314 1243 aa23.41■■□□□ 1.34
C4A-256ENST00000490663 CCT4P50991 539 aaKnown RBP23.41■■□□□ 1.34
C4A-256ENST00000490663 TMC4Q7Z404 712 aa23.41■■□□□ 1.34
C4A-256ENST00000490663 LARGE2Q8N3Y3 721 aa23.41■■□□□ 1.34
C4A-256ENST00000490663 WTIPA6NIX2 430 aaPredicted RBP23.4■■□□□ 1.34
C4A-256ENST00000490663 ANKRD44Q8N8A2 993 aa23.4■■□□□ 1.34
C4A-256ENST00000490663 ARHGAP45Q92619 1136 aa23.4■■□□□ 1.34
C4A-256ENST00000490663 ANKRD18BA2A2Z9 1011 aa23.39■■□□□ 1.33
C4A-256ENST00000490663 C6orf229H3BNL8 230 aa23.39■■□□□ 1.33
C4A-256ENST00000490663 ZKSCAN2Q63HK3 967 aa23.39■■□□□ 1.33
C4A-256ENST00000490663 MEIS3Q99687 375 aa23.39■■□□□ 1.33
C4A-256ENST00000490663 POLLQ9UGP5 575 aa23.39■■□□□ 1.33
C4A-256ENST00000490663 RIMBP2O15034 1052 aa23.38■■□□□ 1.33
C4A-256ENST00000490663 IPO8O15397 1037 aaKnown RBP23.38■■□□□ 1.33
C4A-256ENST00000490663 TMEM57Q8N5G2 664 aa23.38■■□□□ 1.33
C4A-256ENST00000490663 RTFDC1Q9BY42 306 aaPredicted RBP23.38■■□□□ 1.33
C4A-256ENST00000490663 ANKIB1Q9P2G1 1089 aa23.38■■□□□ 1.33
C4A-256ENST00000490663 ZC3H4Q9UPT8 1303 aaKnown RBP23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms