RNA–Protein interactions for RNA: ENST00000490543.5

SRRM1-217, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-217ENST00000490543 DLEC1Q9Y238 1755 aa12.25□□□□□ -0.45
SRRM1-217ENST00000490543 BCAMP50895 628 aa12.25□□□□□ -0.45
SRRM1-217ENST00000490543 ERFEQ4G0M1 354 aa12.25□□□□□ -0.45
SRRM1-217ENST00000490543 NPDC1Q9NQX5 325 aaPredicted RBP12.25□□□□□ -0.45
SRRM1-217ENST00000490543 TIAM2Q8IVF5 1701 aa12.25□□□□□ -0.45
SRRM1-217ENST00000490543 SEMA3EO15041 775 aa12.24□□□□□ -0.45
SRRM1-217ENST00000490543 DDNO94850 711 aaPredicted RBP12.24□□□□□ -0.45
SRRM1-217ENST00000490543 HMOX1P09601 288 aa12.24□□□□□ -0.45
SRRM1-217ENST00000490543 EIF5P55010 431 aaKnown RBP12.24□□□□□ -0.45
SRRM1-217ENST00000490543 TBC1D9BQ66K14 1250 aa12.24□□□□□ -0.45
SRRM1-217ENST00000490543 SOWAHBA6NEL2 793 aa12.23□□□□□ -0.45
SRRM1-217ENST00000490543 MTHFSDQ2M296 383 aaKnown RBP12.23□□□□□ -0.45
SRRM1-217ENST00000490543 PRR5LQ6MZQ0 368 aa12.23□□□□□ -0.45
SRRM1-217ENST00000490543 VSIG10Q8N0Z9 540 aa12.23□□□□□ -0.45
SRRM1-217ENST00000490543 MRC1P22897 1456 aa12.22□□□□□ -0.45
SRRM1-217ENST00000490543 C3orf80F5H4A9 247 aa12.22□□□□□ -0.45
SRRM1-217ENST00000490543 SMAPO00193 183 aa12.22□□□□□ -0.45
SRRM1-217ENST00000490543 FOXN1O15353 648 aa12.22□□□□□ -0.45
SRRM1-217ENST00000490543 HSPA5P11021 654 aaKnown RBP12.22□□□□□ -0.45
SRRM1-217ENST00000490543 BRIP1Q9BX63 1249 aa12.22□□□□□ -0.45
SRRM1-217ENST00000490543 RBM27Q9P2N5 1060 aaKnown RBP12.22□□□□□ -0.45
SRRM1-217ENST00000490543 TBC1D2BQ9UPU7 963 aa12.22□□□□□ -0.45
SRRM1-217ENST00000490543 ANKRD31Q8N7Z5 1873 aa12.22□□□□□ -0.45
SRRM1-217ENST00000490543 PDE6BP35913 854 aa12.21□□□□□ -0.45
SRRM1-217ENST00000490543 FER1L6Q2WGJ9 1857 aa12.21□□□□□ -0.46
SRRM1-217ENST00000490543 DICER1Q9UPY3 1922 aaKnown RBP12.2□□□□□ -0.46
SRRM1-217ENST00000490543 A0A087WZG4 1122 aa12.2□□□□□ -0.46
SRRM1-217ENST00000490543 STARD3NLO95772 234 aa12.2□□□□□ -0.46
SRRM1-217ENST00000490543 TATDN2Q93075 761 aa12.2□□□□□ -0.46
SRRM1-217ENST00000490543 ZNF496Q96IT1 587 aaPredicted RBP12.2□□□□□ -0.46
SRRM1-217ENST00000490543 TAOK3Q9H2K8 898 aa12.2□□□□□ -0.46
SRRM1-217ENST00000490543 TIMELESSQ9UNS1 1208 aa12.2□□□□□ -0.46
SRRM1-217ENST00000490543 ZNF330Q9Y3S2 320 aaPredicted RBP12.2□□□□□ -0.46
SRRM1-217ENST00000490543 PASKQ96RG2 1323 aa12.19□□□□□ -0.46
SRRM1-217ENST00000490543 LTBP3Q9NS15 1303 aa12.19□□□□□ -0.46
SRRM1-217ENST00000490543 VIRMAQ69YN4 1812 aaKnown RBP12.19□□□□□ -0.46
SRRM1-217ENST00000490543 SLX4Q8IY92 1834 aa12.19□□□□□ -0.46
SRRM1-217ENST00000490543 NBPF26B4DH59 902 aa12.19□□□□□ -0.46
SRRM1-217ENST00000490543 EIF4G2P78344 907 aaKnown RBP eCLIP12.19□□□□□ -0.46
SRRM1-217ENST00000490543 PADI6Q6TGC4 694 aa12.19□□□□□ -0.46
SRRM1-217ENST00000490543 PNMA3Q9UL41 463 aa12.19□□□□□ -0.46
SRRM1-217ENST00000490543 KNSTRNQ9Y448 316 aa12.19□□□□□ -0.46
SRRM1-217ENST00000490543 COL11A2P13942 1736 aaPredicted RBP12.19□□□□□ -0.46
SRRM1-217ENST00000490543 CNTNAP1P78357 1384 aa12.18□□□□□ -0.46
SRRM1-217ENST00000490543 ITGBL1O95965 494 aaPredicted RBP12.18□□□□□ -0.46
SRRM1-217ENST00000490543 A1BGP04217 495 aa12.18□□□□□ -0.46
SRRM1-217ENST00000490543 SRGNP10124 158 aa12.18□□□□□ -0.46
SRRM1-217ENST00000490543 VEGFBP49765 207 aa12.18□□□□□ -0.46
SRRM1-217ENST00000490543 PRPF40BQ6NWY9 871 aaKnown RBP12.18□□□□□ -0.46
SRRM1-217ENST00000490543 TTC5Q8N0Z6 440 aa12.18□□□□□ -0.46
SRRM1-217ENST00000490543 TTC13Q8NBP0 860 aa12.18□□□□□ -0.46
SRRM1-217ENST00000490543 IL17REQ8NFR9 667 aa12.18□□□□□ -0.46
SRRM1-217ENST00000490543 PDZRN3Q9UPQ7 1066 aa12.18□□□□□ -0.46
SRRM1-217ENST00000490543 CAMTA2O94983 1202 aa12.17□□□□□ -0.46
SRRM1-217ENST00000490543 ZNF790Q6PG37 636 aa12.17□□□□□ -0.46
SRRM1-217ENST00000490543 CNKSR1Q969H4 720 aa12.17□□□□□ -0.46
SRRM1-217ENST00000490543 LRCH3Q96II8 777 aa12.17□□□□□ -0.46
SRRM1-217ENST00000490543 SETDB2Q96T68 719 aa12.17□□□□□ -0.46
SRRM1-217ENST00000490543 TAF1DQ9H5J8 278 aaPredicted RBP12.17□□□□□ -0.46
SRRM1-217ENST00000490543 PRDM10Q9NQV6 1147 aa12.17□□□□□ -0.46
SRRM1-217ENST00000490543 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.17□□□□□ -0.46
SRRM1-217ENST00000490543 UBR2Q8IWV8 1755 aa12.17□□□□□ -0.46
SRRM1-217ENST00000490543 HEG1Q9ULI3 1381 aa12.17□□□□□ -0.46
SRRM1-217ENST00000490543 IL6STP40189 918 aaPredicted RBP12.16□□□□□ -0.46
SRRM1-217ENST00000490543 STYK1Q6J9G0 422 aa12.16□□□□□ -0.46
SRRM1-217ENST00000490543 OLFM4Q6UX06 510 aa12.16□□□□□ -0.46
SRRM1-217ENST00000490543 NUDT18Q6ZVK8 323 aa12.16□□□□□ -0.46
SRRM1-217ENST00000490543 LDHDQ86WU2 507 aa12.16□□□□□ -0.46
SRRM1-217ENST00000490543 CNBD1Q8NA66 436 aa12.16□□□□□ -0.46
SRRM1-217ENST00000490543 C7orf43Q8WVR3 580 aa12.16□□□□□ -0.46
SRRM1-217ENST00000490543 KCNQ3O43525 872 aa12.15□□□□□ -0.46
SRRM1-217ENST00000490543 DIAPH1O60610 1272 aaKnown RBP12.15□□□□□ -0.46
SRRM1-217ENST00000490543 PIP4K2AP48426 406 aaPredicted RBP12.15□□□□□ -0.46
SRRM1-217ENST00000490543 CTCFP49711 727 aaPredicted RBP12.15□□□□□ -0.46
SRRM1-217ENST00000490543 LBX1P52954 281 aa12.15□□□□□ -0.46
SRRM1-217ENST00000490543 PTGDRQ13258 359 aa12.15□□□□□ -0.46
SRRM1-217ENST00000490543 MASTLQ96GX5 879 aa12.15□□□□□ -0.46
SRRM1-217ENST00000490543 TEX13AQ9BXU3 409 aaPredicted RBP12.15□□□□□ -0.46
SRRM1-217ENST00000490543 WBP1LQ9NX94 342 aa12.15□□□□□ -0.46
SRRM1-217ENST00000490543 ZNF541Q9H0D2 1346 aa12.14□□□□□ -0.47
SRRM1-217ENST00000490543 TESPA1A2RU30 521 aaPredicted RBP12.14□□□□□ -0.47
SRRM1-217ENST00000490543 IQCA1LA6NCM1 817 aa12.14□□□□□ -0.47
SRRM1-217ENST00000490543 TMEM88BA6NKF7 163 aa12.14□□□□□ -0.47
SRRM1-217ENST00000490543 NPHP1O15259 732 aa12.14□□□□□ -0.47
SRRM1-217ENST00000490543 TEFQ10587 303 aa12.14□□□□□ -0.47
SRRM1-217ENST00000490543 EAPPQ56P03 285 aaPredicted RBP12.14□□□□□ -0.47
SRRM1-217ENST00000490543 ZNF277Q9NRM2 450 aaPredicted RBP12.14□□□□□ -0.47
SRRM1-217ENST00000490543 CACNA1SQ13698 1873 aa12.14□□□□□ -0.47
SRRM1-217ENST00000490543 SCN7AQ01118 1682 aa12.13□□□□□ -0.47
SRRM1-217ENST00000490543 ST5P78524 1137 aa12.13□□□□□ -0.47
SRRM1-217ENST00000490543 TRIM26Q12899 539 aaPredicted RBP12.13□□□□□ -0.47
SRRM1-217ENST00000490543 SOGA3Q5TF21 947 aa12.13□□□□□ -0.47
SRRM1-217ENST00000490543 SAMD7Q7Z3H4 446 aa12.13□□□□□ -0.47
SRRM1-217ENST00000490543 DZIP3Q86Y13 1208 aaKnown RBP12.13□□□□□ -0.47
SRRM1-217ENST00000490543 AIDAQ96BJ3 306 aa12.13□□□□□ -0.47
SRRM1-217ENST00000490543 HPS5Q9UPZ3 1129 aa12.13□□□□□ -0.47
SRRM1-217ENST00000490543 USP16Q9Y5T5 823 aa12.13□□□□□ -0.47
SRRM1-217ENST00000490543 PRAMEF22A3QJZ6 481 aa12.12□□□□□ -0.47
SRRM1-217ENST00000490543 GNAT3A8MTJ3 354 aa12.12□□□□□ -0.47
SRRM1-217ENST00000490543 MAP1SQ66K74 1059 aaPredicted RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms