RNA–Protein interactions for RNA: ENST00000490484.7

RBM39-236, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-236ENST00000490484 BBOX1O75936 387 aa13.32□□□□□ -0.28
RBM39-236ENST00000490484 EIF6P56537 245 aaKnown RBP13.32□□□□□ -0.28
RBM39-236ENST00000490484 TRIM28Q13263 835 aaKnown RBP13.32□□□□□ -0.28
RBM39-236ENST00000490484 NIM1KQ8IY84 436 aa13.32□□□□□ -0.28
RBM39-236ENST00000490484 GPC2Q8N158 579 aa13.32□□□□□ -0.28
RBM39-236ENST00000490484 ZBTB38Q8NAP3 1195 aaPredicted RBP13.32□□□□□ -0.28
RBM39-236ENST00000490484 MAP3K2Q9Y2U5 619 aa13.32□□□□□ -0.28
RBM39-236ENST00000490484 PCNTO95613 3336 aa13.32□□□□□ -0.28
RBM39-236ENST00000490484 LTBP1Q14766 1721 aa13.31□□□□□ -0.28
RBM39-236ENST00000490484 ADAMTSL1Q8N6G6 1762 aa13.31□□□□□ -0.28
RBM39-236ENST00000490484 SF3B3Q15393 1217 aaKnown RBP13.31□□□□□ -0.28
RBM39-236ENST00000490484 NCBP3Q53F19 620 aaKnown RBP13.31□□□□□ -0.28
RBM39-236ENST00000490484 EAPPQ56P03 285 aaPredicted RBP13.31□□□□□ -0.28
RBM39-236ENST00000490484 CHADLQ6NUI6 762 aa13.31□□□□□ -0.28
RBM39-236ENST00000490484 SP8Q8IXZ3 490 aa13.31□□□□□ -0.28
RBM39-236ENST00000490484 MPNDQ8N594 471 aa13.31□□□□□ -0.28
RBM39-236ENST00000490484 SUPT20HQ8NEM7 779 aa13.31□□□□□ -0.28
RBM39-236ENST00000490484 CELF1Q92879 486 aaKnown RBP13.31□□□□□ -0.28
RBM39-236ENST00000490484 METTL22Q9BUU2 404 aaPredicted RBP13.31□□□□□ -0.28
RBM39-236ENST00000490484 CWC25Q9NXE8 425 aaPredicted RBP13.31□□□□□ -0.28
RBM39-236ENST00000490484 HACL1Q9UJ83 578 aa13.31□□□□□ -0.28
RBM39-236ENST00000490484 PI4KAP2A4QPH2 592 aa13.3□□□□□ -0.28
RBM39-236ENST00000490484 EPHX2P34913 555 aa13.3□□□□□ -0.28
RBM39-236ENST00000490484 TMC4Q7Z404 712 aa13.3□□□□□ -0.28
RBM39-236ENST00000490484 LDHDQ86WU2 507 aa13.3□□□□□ -0.28
RBM39-236ENST00000490484 DNAJC5GQ8N7S2 189 aa13.3□□□□□ -0.28
RBM39-236ENST00000490484 PI4KAP1Q8N8J0 262 aa13.3□□□□□ -0.28
RBM39-236ENST00000490484 CCDC191Q8NCU4 936 aa13.3□□□□□ -0.28
RBM39-236ENST00000490484 JARID2Q92833 1246 aaPredicted RBP13.3□□□□□ -0.28
RBM39-236ENST00000490484 RTFDC1Q9BY42 306 aaPredicted RBP13.3□□□□□ -0.28
RBM39-236ENST00000490484 PCCAP05165 728 aaPredicted RBP13.29□□□□□ -0.28
RBM39-236ENST00000490484 KSR2Q6VAB6 950 aa13.29□□□□□ -0.28
RBM39-236ENST00000490484 G2E3Q7L622 706 aa13.29□□□□□ -0.28
RBM39-236ENST00000490484 WDR63Q8IWG1 891 aa13.29□□□□□ -0.28
RBM39-236ENST00000490484 KLRG1Q96E93 195 aa13.29□□□□□ -0.28
RBM39-236ENST00000490484 CCDC85AQ96PX6 553 aaPredicted RBP13.29□□□□□ -0.28
RBM39-236ENST00000490484 SLC4A2P04920 1241 aa13.28□□□□□ -0.28
RBM39-236ENST00000490484 HSP90B1P14625 803 aaKnown RBP13.28□□□□□ -0.28
RBM39-236ENST00000490484 LMOD1P29536 600 aaPredicted RBP13.28□□□□□ -0.28
RBM39-236ENST00000490484 SCNN1DP51172 638 aa13.28□□□□□ -0.28
RBM39-236ENST00000490484 EXOSC9Q06265 439 aaKnown RBP13.28□□□□□ -0.28
RBM39-236ENST00000490484 KIAA2012Q0VF49 1180 aa13.28□□□□□ -0.28
RBM39-236ENST00000490484 NEXNQ0ZGT2 675 aa13.28□□□□□ -0.28
RBM39-236ENST00000490484 CWF19L2Q2TBE0 894 aaKnown RBP13.28□□□□□ -0.28
RBM39-236ENST00000490484 IGKV5-2P06315 115 aa13.27□□□□□ -0.29
RBM39-236ENST00000490484 FLIIQ13045 1269 aa13.27□□□□□ -0.29
RBM39-236ENST00000490484 FKBP5Q13451 457 aaPredicted RBP13.27□□□□□ -0.29
RBM39-236ENST00000490484 CCDC152Q4G0S7 254 aa13.27□□□□□ -0.29
RBM39-236ENST00000490484 VPS33BQ9H267 617 aa13.27□□□□□ -0.29
RBM39-236ENST00000490484 SPINK5Q9NQ38 1064 aaPredicted RBP13.27□□□□□ -0.29
RBM39-236ENST00000490484 SEC31BQ9NQW1 1179 aa13.27□□□□□ -0.29
RBM39-236ENST00000490484 ZNRF3Q9ULT6 936 aa13.27□□□□□ -0.29
RBM39-236ENST00000490484 NSFL1CQ9UNZ2 370 aaKnown RBP13.27□□□□□ -0.29
RBM39-236ENST00000490484 CLEC11AQ9Y240 323 aa13.27□□□□□ -0.29
RBM39-236ENST00000490484 PDE8AO60658 829 aa13.26□□□□□ -0.29
RBM39-236ENST00000490484 MYH3P11055 1940 aa13.26□□□□□ -0.29
RBM39-236ENST00000490484 GPSM2P81274 684 aa13.26□□□□□ -0.29
RBM39-236ENST00000490484 PNMA8AQ86V59 439 aaPredicted RBP13.26□□□□□ -0.29
RBM39-236ENST00000490484 CDHR2Q9BYE9 1310 aa13.26□□□□□ -0.29
RBM39-236ENST00000490484 SPEF2Q9C093 1822 aa13.25□□□□□ -0.29
RBM39-236ENST00000490484 PASKQ96RG2 1323 aa13.25□□□□□ -0.29
RBM39-236ENST00000490484 NEURL1BA8MQ27 555 aa13.25□□□□□ -0.29
RBM39-236ENST00000490484 VAMP4O75379 141 aa13.25□□□□□ -0.29
RBM39-236ENST00000490484 RAD17O75943 681 aa13.25□□□□□ -0.29
RBM39-236ENST00000490484 EPS15P42566 896 aa13.25□□□□□ -0.29
RBM39-236ENST00000490484 CTSWP56202 376 aa13.25□□□□□ -0.29
RBM39-236ENST00000490484 RPS8P62241 208 aaKnown RBP13.25□□□□□ -0.29
RBM39-236ENST00000490484 CXCL9Q07325 125 aa13.25□□□□□ -0.29
RBM39-236ENST00000490484 MAP1SQ66K74 1059 aaPredicted RBP13.25□□□□□ -0.29
RBM39-236ENST00000490484 GPR101Q96P66 508 aaPredicted RBP13.25□□□□□ -0.29
RBM39-236ENST00000490484 MYH16Q9H6N6 1097 aa13.25□□□□□ -0.29
RBM39-236ENST00000490484 CACNA1FO60840 1977 aa13.24□□□□□ -0.29
RBM39-236ENST00000490484 YDJCA8MPS7 323 aa13.24□□□□□ -0.29
RBM39-236ENST00000490484 C6orf229H3BNL8 230 aa13.24□□□□□ -0.29
RBM39-236ENST00000490484 GMPSP49915 693 aaPredicted RBP13.24□□□□□ -0.29
RBM39-236ENST00000490484 WASHC4Q2M389 1173 aa13.24□□□□□ -0.29
RBM39-236ENST00000490484 CIAPIN1Q6FI81 312 aa13.24□□□□□ -0.29
RBM39-236ENST00000490484 UBE3BQ7Z3V4 1068 aa13.24□□□□□ -0.29
RBM39-236ENST00000490484 DBNDD1Q9H9R9 158 aa13.24□□□□□ -0.29
RBM39-236ENST00000490484 CREBZFQ9NS37 354 aa13.24□□□□□ -0.29
RBM39-236ENST00000490484 POLLQ9UGP5 575 aa13.24□□□□□ -0.29
RBM39-236ENST00000490484 RIMBP2O15034 1052 aa13.23□□□□□ -0.29
RBM39-236ENST00000490484 UFL1O94874 794 aa13.23□□□□□ -0.29
RBM39-236ENST00000490484 TBC1D16Q8TBP0 767 aa13.23□□□□□ -0.29
RBM39-236ENST00000490484 DNAAF4Q8WXU2 420 aa13.23□□□□□ -0.29
RBM39-236ENST00000490484 GPRC5DQ9NZD1 345 aa13.23□□□□□ -0.29
RBM39-236ENST00000490484 ANKIB1Q9P2G1 1089 aa13.23□□□□□ -0.29
RBM39-236ENST00000490484 ZNF521Q96K83 1311 aa13.22□□□□□ -0.29
RBM39-236ENST00000490484 ITGBL1O95965 494 aaPredicted RBP13.22□□□□□ -0.29
RBM39-236ENST00000490484 GCKRQ14397 625 aa13.22□□□□□ -0.29
RBM39-236ENST00000490484 ANKRD18AQ8IVF6 992 aa13.22□□□□□ -0.29
RBM39-236ENST00000490484 CNTROBQ8N137 903 aa13.22□□□□□ -0.29
RBM39-236ENST00000490484 JMYQ8N9B5 988 aa13.22□□□□□ -0.29
RBM39-236ENST00000490484 CDC5LQ99459 802 aaKnown RBP13.22□□□□□ -0.29
RBM39-236ENST00000490484 EYA3Q99504 573 aa13.22□□□□□ -0.29
RBM39-236ENST00000490484 BCL2L13Q9BXK5 485 aa13.22□□□□□ -0.29
RBM39-236ENST00000490484 GREM2Q9H772 168 aa13.22□□□□□ -0.29
RBM39-236ENST00000490484 MKRN1Q9UHC7 482 aaKnown RBP13.22□□□□□ -0.29
RBM39-236ENST00000490484 F6X3S4 739 aa13.21□□□□□ -0.29
RBM39-236ENST00000490484 ECE2O60344 883 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms