RNA–Protein interactions for RNA: ENST00000490419.1

HOXB6-204, Transcript of homeobox B6, humanhuman

TSL 3

Gene HOXB6, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB6-204ENST00000490419 CCDC152Q4G0S7 254 aa12.92□□□□□ -0.34
HOXB6-204ENST00000490419 CC2D2BQ6DHV5 1058 aa12.92□□□□□ -0.34
HOXB6-204ENST00000490419 GRAPLQ8TC17 118 aaPredicted RBP12.92□□□□□ -0.34
HOXB6-204ENST00000490419 ARHGAP45Q92619 1136 aa12.92□□□□□ -0.34
HOXB6-204ENST00000490419 TMX4Q9H1E5 349 aaPredicted RBP12.92□□□□□ -0.34
HOXB6-204ENST00000490419 C9orf78Q9NZ63 289 aaPredicted RBP12.92□□□□□ -0.34
HOXB6-204ENST00000490419 DICER1Q9UPY3 1922 aaKnown RBP12.92□□□□□ -0.34
HOXB6-204ENST00000490419 GRM8O00222 908 aa12.91□□□□□ -0.34
HOXB6-204ENST00000490419 BCAR3O75815 825 aa12.91□□□□□ -0.34
HOXB6-204ENST00000490419 CASP7P55210 303 aa12.91□□□□□ -0.34
HOXB6-204ENST00000490419 CTSWP56202 376 aa12.91□□□□□ -0.34
HOXB6-204ENST00000490419 RASSF7Q02833 373 aa12.91□□□□□ -0.34
HOXB6-204ENST00000490419 RTKN2Q8IZC4 609 aa12.91□□□□□ -0.34
HOXB6-204ENST00000490419 SPEF2Q9C093 1822 aa12.9□□□□□ -0.34
HOXB6-204ENST00000490419 NFKBIEO00221 500 aa12.9□□□□□ -0.34
HOXB6-204ENST00000490419 CCT4P50991 539 aaKnown RBP12.9□□□□□ -0.34
HOXB6-204ENST00000490419 GRIPAP1Q4V328 841 aa12.9□□□□□ -0.34
HOXB6-204ENST00000490419 OLFM4Q6UX06 510 aa12.9□□□□□ -0.34
HOXB6-204ENST00000490419 TMC4Q7Z404 712 aa12.9□□□□□ -0.34
HOXB6-204ENST00000490419 FRAT1Q92837 279 aaPredicted RBP12.9□□□□□ -0.34
HOXB6-204ENST00000490419 YTHDC1Q96MU7 727 aaKnown RBP12.9□□□□□ -0.34
HOXB6-204ENST00000490419 CCDC85AQ96PX6 553 aaPredicted RBP12.9□□□□□ -0.34
HOXB6-204ENST00000490419 PLA2G12BQ9BX93 195 aa12.9□□□□□ -0.34
HOXB6-204ENST00000490419 TAOK3Q9H2K8 898 aa12.9□□□□□ -0.34
HOXB6-204ENST00000490419 ATP6V0A2Q9Y487 856 aa12.9□□□□□ -0.34
HOXB6-204ENST00000490419 LTBP3Q9NS15 1303 aa12.89□□□□□ -0.35
HOXB6-204ENST00000490419 LRRC37AA6NMS7 1700 aa12.89□□□□□ -0.35
HOXB6-204ENST00000490419 LMNB1P20700 586 aa12.89□□□□□ -0.35
HOXB6-204ENST00000490419 C9orf131Q5VYM1 1079 aa12.89□□□□□ -0.35
HOXB6-204ENST00000490419 SP8Q8IXZ3 490 aa12.89□□□□□ -0.35
HOXB6-204ENST00000490419 TTLL11Q8NHH1 800 aa12.89□□□□□ -0.35
HOXB6-204ENST00000490419 CELF1Q92879 486 aaKnown RBP12.89□□□□□ -0.35
HOXB6-204ENST00000490419 RNF181Q9P0P0 153 aa12.89□□□□□ -0.35
HOXB6-204ENST00000490419 TIAM2Q8IVF5 1701 aa12.88□□□□□ -0.35
HOXB6-204ENST00000490419 RPS8P62241 208 aaKnown RBP12.88□□□□□ -0.35
HOXB6-204ENST00000490419 FKBP4Q02790 459 aaKnown RBP eCLIP12.88□□□□□ -0.35
HOXB6-204ENST00000490419 ZKSCAN2Q63HK3 967 aa12.88□□□□□ -0.35
HOXB6-204ENST00000490419 ATF7IPQ6VMQ6 1270 aa12.88□□□□□ -0.35
HOXB6-204ENST00000490419 SEC31BQ9NQW1 1179 aa12.88□□□□□ -0.35
HOXB6-204ENST00000490419 RTL9Q8NET4 1388 aa12.88□□□□□ -0.35
HOXB6-204ENST00000490419 UTYO14607 1347 aa12.88□□□□□ -0.35
HOXB6-204ENST00000490419 COL4A1P02462 1669 aa12.87□□□□□ -0.35
HOXB6-204ENST00000490419 CSF1RP07333 972 aa12.87□□□□□ -0.35
HOXB6-204ENST00000490419 NBPF7P0C2Y1 421 aaPredicted RBP12.87□□□□□ -0.35
HOXB6-204ENST00000490419 ANKRD18AQ8IVF6 992 aa12.87□□□□□ -0.35
HOXB6-204ENST00000490419 CDC5LQ99459 802 aaKnown RBP12.87□□□□□ -0.35
HOXB6-204ENST00000490419 GREM2Q9H772 168 aa12.87□□□□□ -0.35
HOXB6-204ENST00000490419 SNED1Q8TER0 1413 aa12.87□□□□□ -0.35
HOXB6-204ENST00000490419 TRIM27P14373 513 aa12.86□□□□□ -0.35
HOXB6-204ENST00000490419 PRELPP51888 382 aa12.86□□□□□ -0.35
HOXB6-204ENST00000490419 FOXO4P98177 505 aa12.86□□□□□ -0.35
HOXB6-204ENST00000490419 MPNDQ8N594 471 aa12.86□□□□□ -0.35
HOXB6-204ENST00000490419 PSMD1Q99460 953 aa12.86□□□□□ -0.35
HOXB6-204ENST00000490419 USP44Q9H0E7 712 aa12.86□□□□□ -0.35
HOXB6-204ENST00000490419 CHMP3Q9Y3E7 222 aa12.86□□□□□ -0.35
HOXB6-204ENST00000490419 ITGA6P23229 1130 aa12.85□□□□□ -0.35
HOXB6-204ENST00000490419 FAM161AQ3B820 660 aa12.85□□□□□ -0.35
HOXB6-204ENST00000490419 INTS3Q68E01 1043 aaKnown RBP12.85□□□□□ -0.35
HOXB6-204ENST00000490419 LMBR1LQ6UX01 489 aa12.85□□□□□ -0.35
HOXB6-204ENST00000490419 DPP8Q6V1X1 898 aaPredicted RBP12.85□□□□□ -0.35
HOXB6-204ENST00000490419 SLC51AQ86UW1 340 aa12.85□□□□□ -0.35
HOXB6-204ENST00000490419 SUPT20HQ8NEM7 779 aa12.85□□□□□ -0.35
HOXB6-204ENST00000490419 SUCLG2Q96I99 432 aa12.85□□□□□ -0.35
HOXB6-204ENST00000490419 ZNF277Q9NRM2 450 aaPredicted RBP12.85□□□□□ -0.35
HOXB6-204ENST00000490419 ZC3H4Q9UPT8 1303 aaKnown RBP12.85□□□□□ -0.35
HOXB6-204ENST00000490419 ANKRD18BA2A2Z9 1011 aa12.84□□□□□ -0.35
HOXB6-204ENST00000490419 IGHMBP2P38935 993 aaKnown RBP12.84□□□□□ -0.35
HOXB6-204ENST00000490419 IARSP41252 1262 aaKnown RBP12.84□□□□□ -0.35
HOXB6-204ENST00000490419 IFIT5Q13325 482 aaKnown RBP12.84□□□□□ -0.35
HOXB6-204ENST00000490419 EPHA10Q5JZY3 1008 aa12.84□□□□□ -0.35
HOXB6-204ENST00000490419 CLUAP1Q96AJ1 413 aa12.84□□□□□ -0.35
HOXB6-204ENST00000490419 RCAN3Q9UKA8 241 aa12.84□□□□□ -0.35
HOXB6-204ENST00000490419 HDAC5Q9UQL6 1122 aa12.84□□□□□ -0.35
HOXB6-204ENST00000490419 LTBP1Q14766 1721 aa12.83□□□□□ -0.36
HOXB6-204ENST00000490419 UBTFL1P0CB47 393 aaPredicted RBP12.83□□□□□ -0.36
HOXB6-204ENST00000490419 CCDC57Q2TAC2 916 aa12.83□□□□□ -0.36
HOXB6-204ENST00000490419 FTSJ3Q8IY81 847 aaKnown RBP12.83□□□□□ -0.36
HOXB6-204ENST00000490419 ZNF784Q8NCA9 323 aaPredicted RBP12.83□□□□□ -0.36
HOXB6-204ENST00000490419 KAZALD1Q96I82 304 aa12.83□□□□□ -0.36
HOXB6-204ENST00000490419 RTFDC1Q9BY42 306 aaPredicted RBP12.83□□□□□ -0.36
HOXB6-204ENST00000490419 NSFL1CQ9UNZ2 370 aaKnown RBP12.83□□□□□ -0.36
HOXB6-204ENST00000490419 TNNQ9UQP3 1299 aa12.83□□□□□ -0.36
HOXB6-204ENST00000490419 GPSM2P81274 684 aa12.82□□□□□ -0.36
HOXB6-204ENST00000490419 TAF7LQ5H9L4 462 aa12.82□□□□□ -0.36
HOXB6-204ENST00000490419 DZIP1LQ8IYY4 767 aaKnown RBP12.82□□□□□ -0.36
HOXB6-204ENST00000490419 MPHOSPH8Q99549 860 aa12.82□□□□□ -0.36
HOXB6-204ENST00000490419 VPS33BQ9H267 617 aa12.82□□□□□ -0.36
HOXB6-204ENST00000490419 BICC1Q9H694 974 aaKnown RBP12.82□□□□□ -0.36
HOXB6-204ENST00000490419 BSDC1Q9NW68 430 aaPredicted RBP12.82□□□□□ -0.36
HOXB6-204ENST00000490419 ANKIB1Q9P2G1 1089 aa12.82□□□□□ -0.36
HOXB6-204ENST00000490419 DUOX1Q9NRD9 1551 aa12.81□□□□□ -0.36
HOXB6-204ENST00000490419 PPIP5K2O43314 1243 aa12.81□□□□□ -0.36
HOXB6-204ENST00000490419 GNAI3P08754 354 aa12.81□□□□□ -0.36
HOXB6-204ENST00000490419 MS4A1P11836 297 aa12.81□□□□□ -0.36
HOXB6-204ENST00000490419 RABL6Q3YEC7 729 aaPredicted RBP12.81□□□□□ -0.36
HOXB6-204ENST00000490419 LARGE2Q8N3Y3 721 aa12.81□□□□□ -0.36
HOXB6-204ENST00000490419 TMEM57Q8N5G2 664 aa12.81□□□□□ -0.36
HOXB6-204ENST00000490419 ANKRD44Q8N8A2 993 aa12.81□□□□□ -0.36
HOXB6-204ENST00000490419 ZNF526Q8TF50 670 aaPredicted RBP12.81□□□□□ -0.36
HOXB6-204ENST00000490419 JDP2Q8WYK2 163 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms