RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 ATP5J2-PTCD1G3V325 749 aa12.58□□□□□ -0.4
TMEM39A-210ENST00000490099 CCDC30Q5VVM6 783 aa12.58□□□□□ -0.4
TMEM39A-210ENST00000490099 CHADLQ6NUI6 762 aa12.58□□□□□ -0.4
TMEM39A-210ENST00000490099 TMC4Q7Z404 712 aa12.58□□□□□ -0.4
TMEM39A-210ENST00000490099 MRS2Q9HD23 443 aa12.58□□□□□ -0.4
TMEM39A-210ENST00000490099 SPDYE4A6NLX3 237 aa12.57□□□□□ -0.4
TMEM39A-210ENST00000490099 ANP32CO43423 234 aa12.57□□□□□ -0.4
TMEM39A-210ENST00000490099 POTEIP0CG38 1075 aa12.57□□□□□ -0.4
TMEM39A-210ENST00000490099 POTEJP0CG39 1038 aa12.57□□□□□ -0.4
TMEM39A-210ENST00000490099 HTRA3P83110 453 aa12.57□□□□□ -0.4
TMEM39A-210ENST00000490099 GRAPQ13588 217 aa12.57□□□□□ -0.4
TMEM39A-210ENST00000490099 ZBTB38Q8NAP3 1195 aaPredicted RBP12.57□□□□□ -0.4
TMEM39A-210ENST00000490099 CCDC191Q8NCU4 936 aa12.57□□□□□ -0.4
TMEM39A-210ENST00000490099 GRAPLQ8TC17 118 aaPredicted RBP12.57□□□□□ -0.4
TMEM39A-210ENST00000490099 JDP2Q8WYK2 163 aa12.57□□□□□ -0.4
TMEM39A-210ENST00000490099 KLRG1Q96E93 195 aa12.57□□□□□ -0.4
TMEM39A-210ENST00000490099 FAM89AQ96GI7 184 aa12.57□□□□□ -0.4
TMEM39A-210ENST00000490099 SCN4AP35499 1836 aa12.57□□□□□ -0.4
TMEM39A-210ENST00000490099 ITGBL1O95965 494 aaPredicted RBP12.56□□□□□ -0.4
TMEM39A-210ENST00000490099 GOLGA2Q08379 1002 aa12.56□□□□□ -0.4
TMEM39A-210ENST00000490099 DDX46Q7L014 1031 aaKnown RBP12.56□□□□□ -0.4
TMEM39A-210ENST00000490099 RIC3Q7Z5B4 369 aa12.56□□□□□ -0.4
TMEM39A-210ENST00000490099 LDHDQ86WU2 507 aa12.56□□□□□ -0.4
TMEM39A-210ENST00000490099 WDR63Q8IWG1 891 aa12.56□□□□□ -0.4
TMEM39A-210ENST00000490099 TSR2Q969E8 191 aaKnown RBP12.56□□□□□ -0.4
TMEM39A-210ENST00000490099 METTL22Q9BUU2 404 aaPredicted RBP12.56□□□□□ -0.4
TMEM39A-210ENST00000490099 HACL1Q9UJ83 578 aa12.56□□□□□ -0.4
TMEM39A-210ENST00000490099 LAMB2P55268 1798 aa12.56□□□□□ -0.4
TMEM39A-210ENST00000490099 IRS4O14654 1257 aaPredicted RBP12.55□□□□□ -0.4
TMEM39A-210ENST00000490099 TCERG1O14776 1098 aaKnown RBP12.55□□□□□ -0.4
TMEM39A-210ENST00000490099 EPHX2P34913 555 aa12.55□□□□□ -0.4
TMEM39A-210ENST00000490099 LARGE2Q8N3Y3 721 aa12.55□□□□□ -0.4
TMEM39A-210ENST00000490099 SUPT20HQ8NEM7 779 aa12.55□□□□□ -0.4
TMEM39A-210ENST00000490099 PASKQ96RG2 1323 aa12.55□□□□□ -0.4
TMEM39A-210ENST00000490099 PCCAP05165 728 aaPredicted RBP12.54□□□□□ -0.4
TMEM39A-210ENST00000490099 KIAA2012Q0VF49 1180 aa12.54□□□□□ -0.4
TMEM39A-210ENST00000490099 IFFO2Q5TF58 517 aa12.54□□□□□ -0.4
TMEM39A-210ENST00000490099 KSR2Q6VAB6 950 aa12.54□□□□□ -0.4
TMEM39A-210ENST00000490099 PNMA8AQ86V59 439 aaPredicted RBP12.54□□□□□ -0.4
TMEM39A-210ENST00000490099 MPNDQ8N594 471 aa12.54□□□□□ -0.4
TMEM39A-210ENST00000490099 CELF1Q92879 486 aaKnown RBP12.54□□□□□ -0.4
TMEM39A-210ENST00000490099 TMX4Q9H1E5 349 aaPredicted RBP12.54□□□□□ -0.4
TMEM39A-210ENST00000490099 ZNRF3Q9ULT6 936 aa12.54□□□□□ -0.4
TMEM39A-210ENST00000490099 DDX60Q8IY21 1712 aaKnown RBP12.54□□□□□ -0.4
TMEM39A-210ENST00000490099 PPIP5K2O43314 1243 aa12.53□□□□□ -0.4
TMEM39A-210ENST00000490099 DDX58O95786 925 aaKnown RBP12.53□□□□□ -0.4
TMEM39A-210ENST00000490099 IGKV5-2P06315 115 aa12.53□□□□□ -0.4
TMEM39A-210ENST00000490099 SCNN1DP51172 638 aa12.53□□□□□ -0.4
TMEM39A-210ENST00000490099 EIF6P56537 245 aaKnown RBP12.53□□□□□ -0.4
TMEM39A-210ENST00000490099 RPS8P62241 208 aaKnown RBP12.53□□□□□ -0.4
TMEM39A-210ENST00000490099 CXCL9Q07325 125 aa12.53□□□□□ -0.4
TMEM39A-210ENST00000490099 AOC3Q16853 763 aa12.53□□□□□ -0.4
TMEM39A-210ENST00000490099 TWISTNBQ3B726 338 aaPredicted RBP12.53□□□□□ -0.4
TMEM39A-210ENST00000490099 DPP8Q6V1X1 898 aaPredicted RBP12.53□□□□□ -0.4
TMEM39A-210ENST00000490099 MYD88Q99836 296 aa12.53□□□□□ -0.4
TMEM39A-210ENST00000490099 SSUH2Q9Y2M2 353 aa12.53□□□□□ -0.4
TMEM39A-210ENST00000490099 ADAMTSL1Q8N6G6 1762 aa12.53□□□□□ -0.4
TMEM39A-210ENST00000490099 PI4KAP2A4QPH2 592 aa12.52□□□□□ -0.41
TMEM39A-210ENST00000490099 VAMP4O75379 141 aa12.52□□□□□ -0.41
TMEM39A-210ENST00000490099 HSP90B1P14625 803 aaKnown RBP12.52□□□□□ -0.41
TMEM39A-210ENST00000490099 G2E3Q7L622 706 aa12.52□□□□□ -0.41
TMEM39A-210ENST00000490099 NIM1KQ8IY84 436 aa12.52□□□□□ -0.41
TMEM39A-210ENST00000490099 PI4KAP1Q8N8J0 262 aa12.52□□□□□ -0.41
TMEM39A-210ENST00000490099 ZNF428Q96B54 188 aa12.52□□□□□ -0.41
TMEM39A-210ENST00000490099 CREBZFQ9NS37 354 aa12.52□□□□□ -0.41
TMEM39A-210ENST00000490099 CWC25Q9NXE8 425 aaPredicted RBP12.52□□□□□ -0.41
TMEM39A-210ENST00000490099 MAP3K2Q9Y2U5 619 aa12.52□□□□□ -0.41
TMEM39A-210ENST00000490099 LRRC37AA6NMS7 1700 aa12.51□□□□□ -0.41
TMEM39A-210ENST00000490099 TAF1P21675 1872 aa12.51□□□□□ -0.41
TMEM39A-210ENST00000490099 PDE8AO60658 829 aa12.51□□□□□ -0.41
TMEM39A-210ENST00000490099 PODXL2Q9NZ53 605 aa12.51□□□□□ -0.41
TMEM39A-210ENST00000490099 CDHR2Q9BYE9 1310 aa12.51□□□□□ -0.41
TMEM39A-210ENST00000490099 FANCIQ9NVI1 1328 aa12.51□□□□□ -0.41
TMEM39A-210ENST00000490099 DUOX1Q9NRD9 1551 aa12.51□□□□□ -0.41
TMEM39A-210ENST00000490099 COL4A1P02462 1669 aa12.51□□□□□ -0.41
TMEM39A-210ENST00000490099 YDJCA8MPS7 323 aa12.5□□□□□ -0.41
TMEM39A-210ENST00000490099 H7C1W4 665 aa12.5□□□□□ -0.41
TMEM39A-210ENST00000490099 EPS15P42566 896 aa12.5□□□□□ -0.41
TMEM39A-210ENST00000490099 RTL5Q5HYW3 569 aaPredicted RBP12.5□□□□□ -0.41
TMEM39A-210ENST00000490099 STK31Q9BXU1 1019 aa12.5□□□□□ -0.41
TMEM39A-210ENST00000490099 GPRC5DQ9NZD1 345 aa12.5□□□□□ -0.41
TMEM39A-210ENST00000490099 POLLQ9UGP5 575 aa12.5□□□□□ -0.41
TMEM39A-210ENST00000490099 PGAP2Q9UHJ9 254 aa12.5□□□□□ -0.41
TMEM39A-210ENST00000490099 GJA3Q9Y6H8 435 aa12.5□□□□□ -0.41
TMEM39A-210ENST00000490099 LTBP1Q14766 1721 aa12.5□□□□□ -0.41
TMEM39A-210ENST00000490099 ZNF521Q96K83 1311 aa12.49□□□□□ -0.41
TMEM39A-210ENST00000490099 NEURL1BA8MQ27 555 aa12.49□□□□□ -0.41
TMEM39A-210ENST00000490099 GPSM2P81274 684 aa12.49□□□□□ -0.41
TMEM39A-210ENST00000490099 USP50Q70EL3 339 aaPredicted RBP12.49□□□□□ -0.41
TMEM39A-210ENST00000490099 CNTROBQ8N137 903 aa12.49□□□□□ -0.41
TMEM39A-210ENST00000490099 SEC31BQ9NQW1 1179 aa12.49□□□□□ -0.41
TMEM39A-210ENST00000490099 RTL9Q8NET4 1388 aa12.48□□□□□ -0.41
TMEM39A-210ENST00000490099 CASP7P55210 303 aa12.48□□□□□ -0.41
TMEM39A-210ENST00000490099 FLIIQ13045 1269 aa12.48□□□□□ -0.41
TMEM39A-210ENST00000490099 CCDC152Q4G0S7 254 aa12.48□□□□□ -0.41
TMEM39A-210ENST00000490099 EAPPQ56P03 285 aaPredicted RBP12.48□□□□□ -0.41
TMEM39A-210ENST00000490099 MAP1SQ66K74 1059 aaPredicted RBP12.48□□□□□ -0.41
TMEM39A-210ENST00000490099 CIAPIN1Q6FI81 312 aa12.48□□□□□ -0.41
TMEM39A-210ENST00000490099 TTLL11Q8NHH1 800 aa12.48□□□□□ -0.41
TMEM39A-210ENST00000490099 TBC1D16Q8TBP0 767 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms