RNA–Protein interactions for RNA: ENST00000489944.1

SEMA6C-208, Transcript of semaphorin 6C, humanhuman

TSL 3

Gene SEMA6C, Length 423 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-208ENST00000489944 IRS4O14654 1257 aaPredicted RBP15.26■□□□□ 0.03
SEMA6C-208ENST00000489944 PPIP5K2O43314 1243 aa15.26■□□□□ 0.03
SEMA6C-208ENST00000489944 EPHX2P34913 555 aa15.26■□□□□ 0.03
SEMA6C-208ENST00000489944 NEXNQ0ZGT2 675 aa15.26■□□□□ 0.03
SEMA6C-208ENST00000489944 TWISTNBQ3B726 338 aaPredicted RBP15.26■□□□□ 0.03
SEMA6C-208ENST00000489944 KSR2Q6VAB6 950 aa15.26■□□□□ 0.03
SEMA6C-208ENST00000489944 FAM89AQ96GI7 184 aa15.26■□□□□ 0.03
SEMA6C-208ENST00000489944 CREBZFQ9NS37 354 aa15.26■□□□□ 0.03
SEMA6C-208ENST00000489944 CWC25Q9NXE8 425 aaPredicted RBP15.26■□□□□ 0.03
SEMA6C-208ENST00000489944 ZNRF3Q9ULT6 936 aa15.26■□□□□ 0.03
SEMA6C-208ENST00000489944 CACNA1FO60840 1977 aa15.25■□□□□ 0.03
SEMA6C-208ENST00000489944 ATP5J2-PTCD1G3V325 749 aa15.25■□□□□ 0.03
SEMA6C-208ENST00000489944 ELL2O00472 640 aaPredicted RBP15.25■□□□□ 0.03
SEMA6C-208ENST00000489944 PDE8AO60658 829 aa15.25■□□□□ 0.03
SEMA6C-208ENST00000489944 TNIP1Q15025 636 aa15.25■□□□□ 0.03
SEMA6C-208ENST00000489944 CCDC152Q4G0S7 254 aa15.25■□□□□ 0.03
SEMA6C-208ENST00000489944 PHAXQ9H814 394 aaKnown RBP15.25■□□□□ 0.03
SEMA6C-208ENST00000489944 LRRC37AA6NMS7 1700 aa15.25■□□□□ 0.03
SEMA6C-208ENST00000489944 DDX60Q8IY21 1712 aaKnown RBP15.24■□□□□ 0.03
SEMA6C-208ENST00000489944 CCDC184Q52MB2 194 aa15.24■□□□□ 0.03
SEMA6C-208ENST00000489944 USP50Q70EL3 339 aaPredicted RBP15.24■□□□□ 0.03
SEMA6C-208ENST00000489944 EYA3Q99504 573 aa15.24■□□□□ 0.03
SEMA6C-208ENST00000489944 PASKQ96RG2 1323 aa15.23■□□□□ 0.03
SEMA6C-208ENST00000489944 RPS8P62241 208 aaKnown RBP15.23■□□□□ 0.03
SEMA6C-208ENST00000489944 MYD88Q99836 296 aa15.23■□□□□ 0.03
SEMA6C-208ENST00000489944 MYH16Q9H6N6 1097 aa15.23■□□□□ 0.03
SEMA6C-208ENST00000489944 ADAMTSL1Q8N6G6 1762 aa15.22■□□□□ 0.03
SEMA6C-208ENST00000489944 AOC3Q16853 763 aa15.22■□□□□ 0.03
SEMA6C-208ENST00000489944 PODXL2Q9NZ53 605 aa15.22■□□□□ 0.03
SEMA6C-208ENST00000489944 PI4KAP2A4QPH2 592 aa15.21■□□□□ 0.03
SEMA6C-208ENST00000489944 TSPYL6Q8N831 410 aa15.21■□□□□ 0.03
SEMA6C-208ENST00000489944 PI4KAP1Q8N8J0 262 aa15.21■□□□□ 0.03
SEMA6C-208ENST00000489944 TSR2Q969E8 191 aaKnown RBP15.21■□□□□ 0.03
SEMA6C-208ENST00000489944 MAP3K2Q9Y2U5 619 aa15.21■□□□□ 0.03
SEMA6C-208ENST00000489944 RTL9Q8NET4 1388 aa15.21■□□□□ 0.02
SEMA6C-208ENST00000489944 FANCIQ9NVI1 1328 aa15.2■□□□□ 0.02
SEMA6C-208ENST00000489944 TCERG1O14776 1098 aaKnown RBP15.2■□□□□ 0.02
SEMA6C-208ENST00000489944 ITGBL1O95965 494 aaPredicted RBP15.2■□□□□ 0.02
SEMA6C-208ENST00000489944 SLC4A2P04920 1241 aa15.2■□□□□ 0.02
SEMA6C-208ENST00000489944 SCNN1DP51172 638 aa15.2■□□□□ 0.02
SEMA6C-208ENST00000489944 WASHC4Q2M389 1173 aa15.2■□□□□ 0.02
SEMA6C-208ENST00000489944 CIAPIN1Q6FI81 312 aa15.2■□□□□ 0.02
SEMA6C-208ENST00000489944 ZC3H15Q8WU90 426 aaKnown RBP15.2■□□□□ 0.02
SEMA6C-208ENST00000489944 CDC5LQ99459 802 aaKnown RBP15.2■□□□□ 0.02
SEMA6C-208ENST00000489944 ADARB2Q9NS39 739 aaKnown RBP15.2■□□□□ 0.02
SEMA6C-208ENST00000489944 GPRC5DQ9NZD1 345 aa15.2■□□□□ 0.02
SEMA6C-208ENST00000489944 GJA3Q9Y6H8 435 aa15.2■□□□□ 0.02
SEMA6C-208ENST00000489944 COL4A5P29400 1685 aa15.19■□□□□ 0.02
SEMA6C-208ENST00000489944 TMEM88BA6NKF7 163 aa15.19■□□□□ 0.02
SEMA6C-208ENST00000489944 RPS12P25398 132 aaKnown RBP15.19■□□□□ 0.02
SEMA6C-208ENST00000489944 CXCL9Q07325 125 aa15.19■□□□□ 0.02
SEMA6C-208ENST00000489944 EAPPQ56P03 285 aaPredicted RBP15.19■□□□□ 0.02
SEMA6C-208ENST00000489944 DPF2Q92785 391 aa15.19■□□□□ 0.02
SEMA6C-208ENST00000489944 CELF1Q92879 486 aaKnown RBP15.19■□□□□ 0.02
SEMA6C-208ENST00000489944 NSFL1CQ9UNZ2 370 aaKnown RBP15.19■□□□□ 0.02
SEMA6C-208ENST00000489944 CLEC11AQ9Y240 323 aa15.19■□□□□ 0.02
SEMA6C-208ENST00000489944 VAMP4O75379 141 aa15.18■□□□□ 0.02
SEMA6C-208ENST00000489944 FLIIQ13045 1269 aa15.18■□□□□ 0.02
SEMA6C-208ENST00000489944 CNTROBQ8N137 903 aa15.18■□□□□ 0.02
SEMA6C-208ENST00000489944 LINS1Q8NG48 757 aa15.18■□□□□ 0.02
SEMA6C-208ENST00000489944 DUOX1Q9NRD9 1551 aa15.17■□□□□ 0.02
SEMA6C-208ENST00000489944 NEURL1BA8MQ27 555 aa15.17■□□□□ 0.02
SEMA6C-208ENST00000489944 POTEIP0CG38 1075 aa15.17■□□□□ 0.02
SEMA6C-208ENST00000489944 POTEJP0CG39 1038 aa15.17■□□□□ 0.02
SEMA6C-208ENST00000489944 CTSWP56202 376 aa15.17■□□□□ 0.02
SEMA6C-208ENST00000489944 ANKRD18AQ8IVF6 992 aa15.17■□□□□ 0.02
SEMA6C-208ENST00000489944 PLA2G12BQ9BX93 195 aa15.17■□□□□ 0.02
SEMA6C-208ENST00000489944 ZC3H12CQ9C0D7 883 aaKnown RBP15.17■□□□□ 0.02
SEMA6C-208ENST00000489944 PGAP2Q9UHJ9 254 aa15.17■□□□□ 0.02
SEMA6C-208ENST00000489944 CNTNAP1P78357 1384 aa15.16■□□□□ 0.02
SEMA6C-208ENST00000489944 H7C1D1 291 aa15.16■□□□□ 0.02
SEMA6C-208ENST00000489944 H7C1W4 665 aa15.16■□□□□ 0.02
SEMA6C-208ENST00000489944 IGKV5-2P06315 115 aa15.16■□□□□ 0.02
SEMA6C-208ENST00000489944 MMP14P50281 582 aa15.16■□□□□ 0.02
SEMA6C-208ENST00000489944 TBC1D16Q8TBP0 767 aa15.16■□□□□ 0.02
SEMA6C-208ENST00000489944 DNAAF4Q8WXU2 420 aa15.16■□□□□ 0.02
SEMA6C-208ENST00000489944 ZNF609O15014 1411 aa15.16■□□□□ 0.02
SEMA6C-208ENST00000489944 XDHP47989 1333 aa15.16■□□□□ 0.02
SEMA6C-208ENST00000489944 LTBP1Q14766 1721 aa15.15■□□□□ 0.02
SEMA6C-208ENST00000489944 C6orf229H3BNL8 230 aa15.15■□□□□ 0.02
SEMA6C-208ENST00000489944 ATP2B4P23634 1241 aa15.15■□□□□ 0.02
SEMA6C-208ENST00000489944 EPS15P42566 896 aa15.15■□□□□ 0.02
SEMA6C-208ENST00000489944 GPSM2P81274 684 aa15.15■□□□□ 0.02
SEMA6C-208ENST00000489944 FKBP5Q13451 457 aaPredicted RBP15.15■□□□□ 0.02
SEMA6C-208ENST00000489944 GCKRQ14397 625 aa15.15■□□□□ 0.02
SEMA6C-208ENST00000489944 RTL5Q5HYW3 569 aaPredicted RBP15.15■□□□□ 0.02
SEMA6C-208ENST00000489944 ZNF428Q96B54 188 aa15.15■□□□□ 0.02
SEMA6C-208ENST00000489944 BCL2L13Q9BXK5 485 aa15.15■□□□□ 0.02
SEMA6C-208ENST00000489944 BSDC1Q9NW68 430 aaPredicted RBP15.15■□□□□ 0.02
SEMA6C-208ENST00000489944 GGA1Q9UJY5 639 aa15.15■□□□□ 0.02
SEMA6C-208ENST00000489944 GMPSP49915 693 aaPredicted RBP15.14■□□□□ 0.01
SEMA6C-208ENST00000489944 HTRA3P83110 453 aa15.14■□□□□ 0.01
SEMA6C-208ENST00000489944 TTLL11Q8NHH1 800 aa15.14■□□□□ 0.01
SEMA6C-208ENST00000489944 ANKIB1Q9P2G1 1089 aa15.14■□□□□ 0.01
SEMA6C-208ENST00000489944 POLLQ9UGP5 575 aa15.14■□□□□ 0.01
SEMA6C-208ENST00000489944 RASSF10A6NK89 507 aa15.13■□□□□ 0.01
SEMA6C-208ENST00000489944 EXOSC9Q06265 439 aaKnown RBP15.13■□□□□ 0.01
SEMA6C-208ENST00000489944 IFFO2Q5TF58 517 aa15.13■□□□□ 0.01
SEMA6C-208ENST00000489944 PODNQ7Z5L7 613 aa15.13■□□□□ 0.01
SEMA6C-208ENST00000489944 FAM9BQ8IZU0 186 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms