RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 GRAPLQ8TC17 118 aaPredicted RBP15.34■□□□□ 0.05
SRSF4-204ENST00000489898 CALD1Q05682 793 aaKnown RBP15.33■□□□□ 0.04
SRSF4-204ENST00000489898 ZNF609O15014 1411 aa15.33■□□□□ 0.04
SRSF4-204ENST00000489898 LAMB1P07942 1786 aa15.32■□□□□ 0.04
SRSF4-204ENST00000489898 YDJCA8MPS7 323 aa15.32■□□□□ 0.04
SRSF4-204ENST00000489898 ITGBL1O95965 494 aaPredicted RBP15.32■□□□□ 0.04
SRSF4-204ENST00000489898 AOC3Q16853 763 aa15.32■□□□□ 0.04
SRSF4-204ENST00000489898 GPC2Q8N158 579 aa15.32■□□□□ 0.04
SRSF4-204ENST00000489898 KLRG1Q96E93 195 aa15.32■□□□□ 0.04
SRSF4-204ENST00000489898 TCERG1O14776 1098 aaKnown RBP15.31■□□□□ 0.04
SRSF4-204ENST00000489898 CASP7P55210 303 aa15.31■□□□□ 0.04
SRSF4-204ENST00000489898 SP8Q8IXZ3 490 aa15.31■□□□□ 0.04
SRSF4-204ENST00000489898 ZBTB38Q8NAP3 1195 aaPredicted RBP15.31■□□□□ 0.04
SRSF4-204ENST00000489898 MYD88Q99836 296 aa15.31■□□□□ 0.04
SRSF4-204ENST00000489898 METTL22Q9BUU2 404 aaPredicted RBP15.31■□□□□ 0.04
SRSF4-204ENST00000489898 CDHR2Q9BYE9 1310 aa15.31■□□□□ 0.04
SRSF4-204ENST00000489898 RTL9Q8NET4 1388 aa15.31■□□□□ 0.04
SRSF4-204ENST00000489898 PCCAP05165 728 aaPredicted RBP15.3■□□□□ 0.04
SRSF4-204ENST00000489898 KIAA2012Q0VF49 1180 aa15.3■□□□□ 0.04
SRSF4-204ENST00000489898 TWISTNBQ3B726 338 aaPredicted RBP15.3■□□□□ 0.04
SRSF4-204ENST00000489898 RTL5Q5HYW3 569 aaPredicted RBP15.3■□□□□ 0.04
SRSF4-204ENST00000489898 CHADLQ6NUI6 762 aa15.3■□□□□ 0.04
SRSF4-204ENST00000489898 DPY19L2Q6NUT2 758 aa15.3■□□□□ 0.04
SRSF4-204ENST00000489898 C16orf71Q8IYS4 520 aaPredicted RBP15.3■□□□□ 0.04
SRSF4-204ENST00000489898 IRS4O14654 1257 aaPredicted RBP15.29■□□□□ 0.04
SRSF4-204ENST00000489898 GRIPAP1Q4V328 841 aa15.29■□□□□ 0.04
SRSF4-204ENST00000489898 CCDC30Q5VVM6 783 aa15.29■□□□□ 0.04
SRSF4-204ENST00000489898 LDHDQ86WU2 507 aa15.29■□□□□ 0.04
SRSF4-204ENST00000489898 SEC31BQ9NQW1 1179 aa15.29■□□□□ 0.04
SRSF4-204ENST00000489898 MAP3K2Q9Y2U5 619 aa15.29■□□□□ 0.04
SRSF4-204ENST00000489898 PI4KAP2A4QPH2 592 aa15.28■□□□□ 0.04
SRSF4-204ENST00000489898 VAMP4O75379 141 aa15.28■□□□□ 0.04
SRSF4-204ENST00000489898 BBOX1O75936 387 aa15.28■□□□□ 0.04
SRSF4-204ENST00000489898 EPHX2P34913 555 aa15.28■□□□□ 0.04
SRSF4-204ENST00000489898 CXCL9Q07325 125 aa15.28■□□□□ 0.04
SRSF4-204ENST00000489898 GOLGA2Q08379 1002 aa15.28■□□□□ 0.04
SRSF4-204ENST00000489898 CWF19L2Q2TBE0 894 aaKnown RBP15.28■□□□□ 0.04
SRSF4-204ENST00000489898 PI4KAP1Q8N8J0 262 aa15.28■□□□□ 0.04
SRSF4-204ENST00000489898 CCDC191Q8NCU4 936 aa15.28■□□□□ 0.04
SRSF4-204ENST00000489898 JARID2Q92833 1246 aaPredicted RBP15.28■□□□□ 0.04
SRSF4-204ENST00000489898 POLLQ9UGP5 575 aa15.28■□□□□ 0.04
SRSF4-204ENST00000489898 SHTN1A0MZ66 631 aa15.27■□□□□ 0.04
SRSF4-204ENST00000489898 IQCA1LA6NCM1 817 aa15.27■□□□□ 0.04
SRSF4-204ENST00000489898 NEURL1BA8MQ27 555 aa15.27■□□□□ 0.04
SRSF4-204ENST00000489898 PPIP5K2O43314 1243 aa15.27■□□□□ 0.04
SRSF4-204ENST00000489898 ANP32CO43423 234 aa15.27■□□□□ 0.04
SRSF4-204ENST00000489898 EPS15P42566 896 aa15.27■□□□□ 0.04
SRSF4-204ENST00000489898 KSR2Q6VAB6 950 aa15.27■□□□□ 0.04
SRSF4-204ENST00000489898 RIC3Q7Z5B4 369 aa15.27■□□□□ 0.04
SRSF4-204ENST00000489898 WDR63Q8IWG1 891 aa15.27■□□□□ 0.04
SRSF4-204ENST00000489898 LARGE2Q8N3Y3 721 aa15.27■□□□□ 0.04
SRSF4-204ENST00000489898 HACL1Q9UJ83 578 aa15.27■□□□□ 0.04
SRSF4-204ENST00000489898 PAPPA2Q9BXP8 1791 aa15.26■□□□□ 0.03
SRSF4-204ENST00000489898 GPSM2P81274 684 aa15.26■□□□□ 0.03
SRSF4-204ENST00000489898 DDX46Q7L014 1031 aaKnown RBP15.26■□□□□ 0.03
SRSF4-204ENST00000489898 GPR101Q96P66 508 aaPredicted RBP15.26■□□□□ 0.03
SRSF4-204ENST00000489898 VPS33BQ9H267 617 aa15.26■□□□□ 0.03
SRSF4-204ENST00000489898 CNTNAP1P78357 1384 aa15.25■□□□□ 0.03
SRSF4-204ENST00000489898 WTIPA6NIX2 430 aaPredicted RBP15.25■□□□□ 0.03
SRSF4-204ENST00000489898 EXOSC9Q06265 439 aaKnown RBP15.25■□□□□ 0.03
SRSF4-204ENST00000489898 FMR1Q06787 632 aaKnown RBP eCLIP15.25■□□□□ 0.03
SRSF4-204ENST00000489898 FLIIQ13045 1269 aa15.25■□□□□ 0.03
SRSF4-204ENST00000489898 DPP8Q6V1X1 898 aaPredicted RBP15.25■□□□□ 0.03
SRSF4-204ENST00000489898 TMC4Q7Z404 712 aa15.25■□□□□ 0.03
SRSF4-204ENST00000489898 MPNDQ8N594 471 aa15.25■□□□□ 0.03
SRSF4-204ENST00000489898 CWC25Q9NXE8 425 aaPredicted RBP15.25■□□□□ 0.03
SRSF4-204ENST00000489898 PODXL2Q9NZ53 605 aa15.25■□□□□ 0.03
SRSF4-204ENST00000489898 IRS2Q9Y4H2 1338 aa15.24■□□□□ 0.03
SRSF4-204ENST00000489898 MYH13Q9UKX3 1938 aa15.24■□□□□ 0.03
SRSF4-204ENST00000489898 NIM1KQ8IY84 436 aa15.24■□□□□ 0.03
SRSF4-204ENST00000489898 JDP2Q8WYK2 163 aa15.24■□□□□ 0.03
SRSF4-204ENST00000489898 CREBZFQ9NS37 354 aa15.24■□□□□ 0.03
SRSF4-204ENST00000489898 GPRC5DQ9NZD1 345 aa15.24■□□□□ 0.03
SRSF4-204ENST00000489898 ZNRF3Q9ULT6 936 aa15.24■□□□□ 0.03
SRSF4-204ENST00000489898 H7C1W4 665 aa15.23■□□□□ 0.03
SRSF4-204ENST00000489898 PDE8AO60658 829 aa15.23■□□□□ 0.03
SRSF4-204ENST00000489898 CTSWP56202 376 aa15.23■□□□□ 0.03
SRSF4-204ENST00000489898 MAP1SQ66K74 1059 aaPredicted RBP15.23■□□□□ 0.03
SRSF4-204ENST00000489898 TTLL11Q8NHH1 800 aa15.23■□□□□ 0.03
SRSF4-204ENST00000489898 TBC1D16Q8TBP0 767 aa15.23■□□□□ 0.03
SRSF4-204ENST00000489898 EGFRP00533 1210 aa15.22■□□□□ 0.03
SRSF4-204ENST00000489898 SLC4A2P04920 1241 aa15.22■□□□□ 0.03
SRSF4-204ENST00000489898 GMPSP49915 693 aaPredicted RBP15.22■□□□□ 0.03
SRSF4-204ENST00000489898 HIRAP54198 1017 aaPredicted RBP15.22■□□□□ 0.03
SRSF4-204ENST00000489898 TRPM4Q8TD43 1214 aa15.22■□□□□ 0.03
SRSF4-204ENST00000489898 PLA2G12BQ9BX93 195 aa15.22■□□□□ 0.03
SRSF4-204ENST00000489898 KCNQ5Q9NR82 932 aa15.22■□□□□ 0.03
SRSF4-204ENST00000489898 GJA3Q9Y6H8 435 aa15.22■□□□□ 0.03
SRSF4-204ENST00000489898 EIF6P56537 245 aaKnown RBP15.21■□□□□ 0.03
SRSF4-204ENST00000489898 RPS8P62241 208 aaKnown RBP15.21■□□□□ 0.03
SRSF4-204ENST00000489898 GCKRQ14397 625 aa15.21■□□□□ 0.03
SRSF4-204ENST00000489898 SUPT20HQ8NEM7 779 aa15.21■□□□□ 0.03
SRSF4-204ENST00000489898 GREM2Q9H772 168 aa15.21■□□□□ 0.03
SRSF4-204ENST00000489898 SALL2Q9Y467 1007 aaPredicted RBP15.21■□□□□ 0.03
SRSF4-204ENST00000489898 OTOFQ9HC10 1997 aa15.21■□□□□ 0.03
SRSF4-204ENST00000489898 RAD17O75943 681 aa15.2■□□□□ 0.02
SRSF4-204ENST00000489898 DDX58O95786 925 aaKnown RBP15.2■□□□□ 0.02
SRSF4-204ENST00000489898 EAPPQ56P03 285 aaPredicted RBP15.2■□□□□ 0.02
SRSF4-204ENST00000489898 CCDC85AQ96PX6 553 aaPredicted RBP15.2■□□□□ 0.02
SRSF4-204ENST00000489898 DBNDD1Q9H9R9 158 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms