RNA–Protein interactions for RNA: ENST00000489614.5

NOD1-208, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 3,098 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-208ENST00000489614 SMARCC1Q92922 1105 aaPredicted RBP11.88□□□□□ -0.51
NOD1-208ENST00000489614 FOXD4L1Q9NU39 408 aa11.88□□□□□ -0.51
NOD1-208ENST00000489614 TNRC6CQ9HCJ0 1690 aaKnown RBP11.88□□□□□ -0.51
NOD1-208ENST00000489614 IL6STP40189 918 aaPredicted RBP11.88□□□□□ -0.51
NOD1-208ENST00000489614 GCKRQ14397 625 aa11.88□□□□□ -0.51
NOD1-208ENST00000489614 MEX3CQ5U5Q3 659 aaKnown RBP11.88□□□□□ -0.51
NOD1-208ENST00000489614 QTRT2Q9H974 415 aaKnown RBP11.88□□□□□ -0.51
NOD1-208ENST00000489614 LOC102724428A0A0B4J2F2 783 aa11.87□□□□□ -0.51
NOD1-208ENST00000489614 SIK1P57059 783 aa11.87□□□□□ -0.51
NOD1-208ENST00000489614 TNPO1Q92973 898 aaKnown RBP11.87□□□□□ -0.51
NOD1-208ENST00000489614 H7C1W4 665 aa11.87□□□□□ -0.51
NOD1-208ENST00000489614 PTCD1O75127 700 aaKnown RBP11.87□□□□□ -0.51
NOD1-208ENST00000489614 MYL6BP14649 208 aa11.87□□□□□ -0.51
NOD1-208ENST00000489614 KCNA4P22459 653 aa11.87□□□□□ -0.51
NOD1-208ENST00000489614 MAP3K15Q6ZN16 1313 aa11.87□□□□□ -0.51
NOD1-208ENST00000489614 PNMA6EA0A0J9YXQ4 647 aa11.86□□□□□ -0.51
NOD1-208ENST00000489614 PIP4K2AP48426 406 aaPredicted RBP11.86□□□□□ -0.51
NOD1-208ENST00000489614 TBC1D32Q96NH3 1257 aa11.86□□□□□ -0.51
NOD1-208ENST00000489614 ZKSCAN5Q9Y2L8 839 aa11.86□□□□□ -0.51
NOD1-208ENST00000489614 ERVV-1B6SEH8 477 aa11.86□□□□□ -0.51
NOD1-208ENST00000489614 CWF19L2Q2TBE0 894 aaKnown RBP11.86□□□□□ -0.51
NOD1-208ENST00000489614 RC3H1Q5TC82 1133 aaKnown RBP11.86□□□□□ -0.51
NOD1-208ENST00000489614 ZNF772Q68DY9 489 aaPredicted RBP11.86□□□□□ -0.51
NOD1-208ENST00000489614 LINC00116Q8NCU8 138 aa11.86□□□□□ -0.51
NOD1-208ENST00000489614 ACSBG1Q96GR2 724 aa11.86□□□□□ -0.51
NOD1-208ENST00000489614 LRRFIP2Q9Y608 721 aaKnown RBP11.86□□□□□ -0.51
NOD1-208ENST00000489614 GRM8O00222 908 aa11.85□□□□□ -0.51
NOD1-208ENST00000489614 SLC4A10Q6U841 1118 aa11.85□□□□□ -0.51
NOD1-208ENST00000489614 ZBTB1Q9Y2K1 713 aa11.85□□□□□ -0.51
NOD1-208ENST00000489614 LRRC37AA6NMS7 1700 aa11.85□□□□□ -0.51
NOD1-208ENST00000489614 ANKRD31Q8N7Z5 1873 aa11.85□□□□□ -0.51
NOD1-208ENST00000489614 STARD3NLO95772 234 aa11.85□□□□□ -0.51
NOD1-208ENST00000489614 PDCL2Q8N4E4 241 aa11.85□□□□□ -0.51
NOD1-208ENST00000489614 MYRIPQ8NFW9 859 aa11.85□□□□□ -0.51
NOD1-208ENST00000489614 CCDC9Q9Y3X0 531 aaKnown RBP11.85□□□□□ -0.51
NOD1-208ENST00000489614 RFX5P48382 616 aaPredicted RBP11.84□□□□□ -0.51
NOD1-208ENST00000489614 RBM6P78332 1123 aaKnown RBP11.84□□□□□ -0.51
NOD1-208ENST00000489614 SUCLG2Q96I99 432 aa11.84□□□□□ -0.51
NOD1-208ENST00000489614 PLA2G12BQ9BX93 195 aa11.84□□□□□ -0.51
NOD1-208ENST00000489614 CHD1LQ86WJ1 897 aa11.84□□□□□ -0.51
NOD1-208ENST00000489614 DDX49Q9Y6V7 483 aaKnown RBP11.84□□□□□ -0.51
NOD1-208ENST00000489614 ERICH4A6NGS2 130 aa11.83□□□□□ -0.52
NOD1-208ENST00000489614 CRKLP46109 303 aaKnown RBP11.83□□□□□ -0.52
NOD1-208ENST00000489614 FOXO4P98177 505 aa11.83□□□□□ -0.52
NOD1-208ENST00000489614 GIGYF2Q6Y7W6 1299 aaKnown RBP11.83□□□□□ -0.52
NOD1-208ENST00000489614 CCDC87Q9NVE4 849 aa11.83□□□□□ -0.52
NOD1-208ENST00000489614 DOCK2Q92608 1830 aa11.83□□□□□ -0.52
NOD1-208ENST00000489614 CDHR2Q9BYE9 1310 aa11.83□□□□□ -0.52
NOD1-208ENST00000489614 CAMTA2O94983 1202 aa11.83□□□□□ -0.52
NOD1-208ENST00000489614 PRR29P0C7W0 189 aa11.83□□□□□ -0.52
NOD1-208ENST00000489614 UBTFL1P0CB47 393 aaPredicted RBP11.83□□□□□ -0.52
NOD1-208ENST00000489614 TCIRG1Q13488 830 aa11.83□□□□□ -0.52
NOD1-208ENST00000489614 ZNF34Q8IZ26 560 aa11.83□□□□□ -0.52
NOD1-208ENST00000489614 CCDC191Q8NCU4 936 aa11.83□□□□□ -0.52
NOD1-208ENST00000489614 MYD88Q99836 296 aa11.83□□□□□ -0.52
NOD1-208ENST00000489614 LTBP1Q14766 1721 aa11.83□□□□□ -0.52
NOD1-208ENST00000489614 USP42Q9H9J4 1324 aaKnown RBP11.83□□□□□ -0.52
NOD1-208ENST00000489614 PATL2C9JE40 543 aaKnown RBP11.83□□□□□ -0.52
NOD1-208ENST00000489614 PTMAP06454 111 aaKnown RBP11.83□□□□□ -0.52
NOD1-208ENST00000489614 GBP4Q96PP9 640 aa11.83□□□□□ -0.52
NOD1-208ENST00000489614 MFAP1P55081 439 aaKnown RBP11.82□□□□□ -0.52
NOD1-208ENST00000489614 EPHA10Q5JZY3 1008 aa11.82□□□□□ -0.52
NOD1-208ENST00000489614 RIC3Q7Z5B4 369 aa11.82□□□□□ -0.52
NOD1-208ENST00000489614 OSBPL3Q9H4L5 887 aa11.82□□□□□ -0.52
NOD1-208ENST00000489614 MYH7P12883 1935 aa11.82□□□□□ -0.52
NOD1-208ENST00000489614 AKAP11Q9UKA4 1901 aa11.82□□□□□ -0.52
NOD1-208ENST00000489614 CAPN2P17655 700 aa11.82□□□□□ -0.52
NOD1-208ENST00000489614 AIMP1Q12904 312 aaKnown RBP11.82□□□□□ -0.52
NOD1-208ENST00000489614 RBM42Q9BTD8 480 aaKnown RBP11.82□□□□□ -0.52
NOD1-208ENST00000489614 RIC1Q4ADV7 1423 aa11.82□□□□□ -0.52
NOD1-208ENST00000489614 DLEC1Q9Y238 1755 aa11.82□□□□□ -0.52
NOD1-208ENST00000489614 UBN2Q6ZU65 1347 aa11.81□□□□□ -0.52
NOD1-208ENST00000489614 TAF1P21675 1872 aa11.81□□□□□ -0.52
NOD1-208ENST00000489614 HLFQ16534 295 aa11.81□□□□□ -0.52
NOD1-208ENST00000489614 SKOR2Q2VWA4 1001 aaPredicted RBP11.81□□□□□ -0.52
NOD1-208ENST00000489614 EP400NLQ6ZTU2 488 aa11.81□□□□□ -0.52
NOD1-208ENST00000489614 TIGD1Q96MW7 591 aa11.81□□□□□ -0.52
NOD1-208ENST00000489614 ATP6V1AP38606 617 aa11.81□□□□□ -0.52
NOD1-208ENST00000489614 HSCBQ8IWL3 235 aa11.81□□□□□ -0.52
NOD1-208ENST00000489614 RBSNQ9H1K0 784 aa11.81□□□□□ -0.52
NOD1-208ENST00000489614 KIF3AQ9Y496 699 aa11.81□□□□□ -0.52
NOD1-208ENST00000489614 PPP1R42Q7Z4L9 355 aa11.8□□□□□ -0.52
NOD1-208ENST00000489614 KIAA1551Q9HCM1 1747 aa11.8□□□□□ -0.52
NOD1-208ENST00000489614 KIF13BQ9NQT8 1826 aa11.8□□□□□ -0.52
NOD1-208ENST00000489614 HS1BP3Q53T59 392 aa11.8□□□□□ -0.52
NOD1-208ENST00000489614 KRT27Q7Z3Y8 459 aa11.8□□□□□ -0.52
NOD1-208ENST00000489614 BICC1Q9H694 974 aaKnown RBP11.8□□□□□ -0.52
NOD1-208ENST00000489614 BCL2L12Q9HB09 334 aa11.8□□□□□ -0.52
NOD1-208ENST00000489614 LOC102724159A0A0B4J2E5 919 aa11.8□□□□□ -0.52
NOD1-208ENST00000489614 TNNT3P45378 269 aaPredicted RBP11.8□□□□□ -0.52
NOD1-208ENST00000489614 PWP2Q15269 919 aaKnown RBP11.8□□□□□ -0.52
NOD1-208ENST00000489614 FAM196AQ6ZSG2 479 aa11.8□□□□□ -0.52
NOD1-208ENST00000489614 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.8□□□□□ -0.52
NOD1-208ENST00000489614 C17orf53Q8N3J3 647 aaPredicted RBP11.8□□□□□ -0.52
NOD1-208ENST00000489614 CAVIN1Q6NZI2 390 aaKnown RBP11.79□□□□□ -0.52
NOD1-208ENST00000489614 AMIGO3Q86WK7 504 aa11.79□□□□□ -0.52
NOD1-208ENST00000489614 PLEKHM2Q8IWE5 1019 aa11.79□□□□□ -0.52
NOD1-208ENST00000489614 RTL9Q8NET4 1388 aa11.79□□□□□ -0.52
NOD1-208ENST00000489614 HMMRO75330 724 aa11.79□□□□□ -0.52
NOD1-208ENST00000489614 PCCAP05165 728 aaPredicted RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms