RNA–Protein interactions for RNA: ENST00000489583.1

APTX-229, Transcript of aprataxin, humanhuman

TSL 3

Gene APTX, Length 397 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-229ENST00000489583 RTFDC1Q9BY42 306 aaPredicted RBP25.29■■□□□ 1.64
APTX-229ENST00000489583 GPRC5DQ9NZD1 345 aa25.29■■□□□ 1.64
APTX-229ENST00000489583 DBF4Q9UBU7 674 aaPredicted RBP25.29■■□□□ 1.64
APTX-229ENST00000489583 HOXB7P09629 217 aa25.28■■□□□ 1.64
APTX-229ENST00000489583 GRM1Q13255 1194 aa25.28■■□□□ 1.64
APTX-229ENST00000489583 WBP1LQ9NX94 342 aa25.28■■□□□ 1.64
APTX-229ENST00000489583 CHPF2Q9P2E5 772 aa25.28■■□□□ 1.64
APTX-229ENST00000489583 ADAMTSL1Q8N6G6 1762 aa25.28■■□□□ 1.64
APTX-229ENST00000489583 CXCL9Q07325 125 aa25.27■■□□□ 1.64
APTX-229ENST00000489583 ANKRD13DQ6ZTN6 518 aa25.27■■□□□ 1.64
APTX-229ENST00000489583 PLBD2Q8NHP8 589 aa25.27■■□□□ 1.64
APTX-229ENST00000489583 HSP90B1P14625 803 aaKnown RBP25.26■■□□□ 1.63
APTX-229ENST00000489583 KIAA2012Q0VF49 1180 aa25.26■■□□□ 1.63
APTX-229ENST00000489583 HYPKQ9NX55 129 aa25.26■■□□□ 1.63
APTX-229ENST00000489583 CDHR2Q9BYE9 1310 aa25.26■■□□□ 1.63
APTX-229ENST00000489583 GMPSP49915 693 aaPredicted RBP25.25■■□□□ 1.63
APTX-229ENST00000489583 LBX1P52954 281 aa25.25■■□□□ 1.63
APTX-229ENST00000489583 COL4A5P29400 1685 aa25.25■■□□□ 1.63
APTX-229ENST00000489583 CAPNS2Q96L46 248 aa25.24■■□□□ 1.63
APTX-229ENST00000489583 H7C1D1 291 aa25.23■■□□□ 1.63
APTX-229ENST00000489583 RAD17O75943 681 aa25.23■■□□□ 1.63
APTX-229ENST00000489583 CALD1Q05682 793 aaKnown RBP25.23■■□□□ 1.63
APTX-229ENST00000489583 KRT24Q2M2I5 525 aa25.22■■□□□ 1.63
APTX-229ENST00000489583 WASHC4Q2M389 1173 aa25.22■■□□□ 1.63
APTX-229ENST00000489583 CFAP44Q96MT7 982 aa25.22■■□□□ 1.63
APTX-229ENST00000489583 GPR101Q96P66 508 aaPredicted RBP25.22■■□□□ 1.63
APTX-229ENST00000489583 CHMP4AQ9BY43 222 aa25.22■■□□□ 1.63
APTX-229ENST00000489583 ANKRD36CQ5JPF3 1778 aa25.21■■□□□ 1.63
APTX-229ENST00000489583 TRAF5O00463 557 aa25.21■■□□□ 1.63
APTX-229ENST00000489583 GOLGA2Q08379 1002 aa25.21■■□□□ 1.63
APTX-229ENST00000489583 SLC51AQ86UW1 340 aa25.21■■□□□ 1.63
APTX-229ENST00000489583 ZC3H15Q8WU90 426 aaKnown RBP25.21■■□□□ 1.63
APTX-229ENST00000489583 EYA3Q99504 573 aa25.21■■□□□ 1.63
APTX-229ENST00000489583 NSFL1CQ9UNZ2 370 aaKnown RBP25.21■■□□□ 1.63
APTX-229ENST00000489583 TRIM35Q9UPQ4 493 aa25.21■■□□□ 1.63
APTX-229ENST00000489583 G3V3G9 751 aa25.2■■□□□ 1.62
APTX-229ENST00000489583 C6orf229H3BNL8 230 aa25.2■■□□□ 1.62
APTX-229ENST00000489583 CELF2O95319 508 aaKnown RBP25.2■■□□□ 1.62
APTX-229ENST00000489583 DCAF8Q5TAQ9 597 aa25.2■■□□□ 1.62
APTX-229ENST00000489583 RIC3Q7Z5B4 369 aa25.2■■□□□ 1.62
APTX-229ENST00000489583 ZNF428Q96B54 188 aa25.2■■□□□ 1.62
APTX-229ENST00000489583 FAM89AQ96GI7 184 aa25.2■■□□□ 1.62
APTX-229ENST00000489583 ADAMTS8Q9UP79 889 aa25.2■■□□□ 1.62
APTX-229ENST00000489583 TLL2Q9Y6L7 1015 aa25.2■■□□□ 1.62
APTX-229ENST00000489583 ATP5J2-PTCD1G3V325 749 aa25.19■■□□□ 1.62
APTX-229ENST00000489583 DUSP27Q5VZP5 1158 aa25.19■■□□□ 1.62
APTX-229ENST00000489583 CYP4F22Q6NT55 531 aa25.19■■□□□ 1.62
APTX-229ENST00000489583 ZNF408Q9H9D4 720 aa25.19■■□□□ 1.62
APTX-229ENST00000489583 CNOT7Q9UIV1 285 aaKnown RBP25.19■■□□□ 1.62
APTX-229ENST00000489583 LTBP1Q14766 1721 aa25.18■■□□□ 1.62
APTX-229ENST00000489583 CDC37L1Q7L3B6 337 aa25.18■■□□□ 1.62
APTX-229ENST00000489583 RTL5Q5HYW3 569 aaPredicted RBP25.17■■□□□ 1.62
APTX-229ENST00000489583 CST9Q5W186 159 aa25.17■■□□□ 1.62
APTX-229ENST00000489583 IRS4O14654 1257 aaPredicted RBP25.16■■□□□ 1.62
APTX-229ENST00000489583 HSPA8P11142 646 aaKnown RBP25.16■■□□□ 1.62
APTX-229ENST00000489583 MAP2K2P36507 400 aa25.16■■□□□ 1.62
APTX-229ENST00000489583 FMR1Q06787 632 aaKnown RBP eCLIP25.16■■□□□ 1.62
APTX-229ENST00000489583 SF3B3Q15393 1217 aaKnown RBP25.16■■□□□ 1.62
APTX-229ENST00000489583 ISCA1Q9BUE6 129 aa25.16■■□□□ 1.62
APTX-229ENST00000489583 RIMBP2O15034 1052 aa25.15■■□□□ 1.62
APTX-229ENST00000489583 GNAI1P63096 354 aa25.15■■□□□ 1.62
APTX-229ENST00000489583 GLIS2Q9BZE0 524 aaPredicted RBP25.15■■□□□ 1.62
APTX-229ENST00000489583 MICALL2Q8IY33 904 aa25.14■■□□□ 1.62
APTX-229ENST00000489583 MBIPQ9NS73 344 aa25.14■■□□□ 1.62
APTX-229ENST00000489583 LAMB2P55268 1798 aa25.13■■□□□ 1.61
APTX-229ENST00000489583 CA12O43570 354 aa25.13■■□□□ 1.61
APTX-229ENST00000489583 DDX58O95786 925 aaKnown RBP25.13■■□□□ 1.61
APTX-229ENST00000489583 RPS8P62241 208 aaKnown RBP25.13■■□□□ 1.61
APTX-229ENST00000489583 TRIM28Q13263 835 aaKnown RBP25.13■■□□□ 1.61
APTX-229ENST00000489583 DPF2Q92785 391 aa25.13■■□□□ 1.61
APTX-229ENST00000489583 ZC3H12CQ9C0D7 883 aaKnown RBP25.13■■□□□ 1.61
APTX-229ENST00000489583 DBNDD1Q9H9R9 158 aa25.13■■□□□ 1.61
APTX-229ENST00000489583 PGAP2Q9UHJ9 254 aa25.13■■□□□ 1.61
APTX-229ENST00000489583 RPS12P25398 132 aaKnown RBP25.12■■□□□ 1.61
APTX-229ENST00000489583 SAPCD2Q86UD0 394 aa25.12■■□□□ 1.61
APTX-229ENST00000489583 CELF1Q92879 486 aaKnown RBP25.12■■□□□ 1.61
APTX-229ENST00000489583 HHIPL1Q96JK4 782 aa25.12■■□□□ 1.61
APTX-229ENST00000489583 IFT57Q9NWB7 429 aa25.12■■□□□ 1.61
APTX-229ENST00000489583 ANKIB1Q9P2G1 1089 aa25.12■■□□□ 1.61
APTX-229ENST00000489583 TRPM7Q96QT4 1865 aa25.12■■□□□ 1.61
APTX-229ENST00000489583 CCDC152Q4G0S7 254 aa25.11■■□□□ 1.61
APTX-229ENST00000489583 ZBTB38Q8NAP3 1195 aaPredicted RBP25.11■■□□□ 1.61
APTX-229ENST00000489583 YDJCA8MPS7 323 aa25.1■■□□□ 1.61
APTX-229ENST00000489583 PSMD14O00487 310 aa25.1■■□□□ 1.61
APTX-229ENST00000489583 TRPM4Q8TD43 1214 aa25.1■■□□□ 1.61
APTX-229ENST00000489583 DCPSQ96C86 337 aaKnown RBP25.1■■□□□ 1.61
APTX-229ENST00000489583 ELL2O00472 640 aaPredicted RBP25.09■■□□□ 1.61
APTX-229ENST00000489583 ECE2O60344 883 aa25.09■■□□□ 1.61
APTX-229ENST00000489583 GPSM2P81274 684 aa25.09■■□□□ 1.61
APTX-229ENST00000489583 MYD88Q99836 296 aa25.09■■□□□ 1.61
APTX-229ENST00000489583 ZBTB12Q9Y330 459 aaPredicted RBP25.09■■□□□ 1.61
APTX-229ENST00000489583 APAF1O14727 1248 aa25.08■■□□□ 1.61
APTX-229ENST00000489583 AOC2O75106 756 aa25.08■■□□□ 1.61
APTX-229ENST00000489583 DOK7Q18PE1 504 aa25.08■■□□□ 1.61
APTX-229ENST00000489583 CCDC30Q5VVM6 783 aa25.08■■□□□ 1.61
APTX-229ENST00000489583 USP48Q86UV5 1035 aa25.08■■□□□ 1.61
APTX-229ENST00000489583 CCDC191Q8NCU4 936 aa25.08■■□□□ 1.61
APTX-229ENST00000489583 POLLQ9UGP5 575 aa25.08■■□□□ 1.61
APTX-229ENST00000489583 HIRAP54198 1017 aaPredicted RBP25.07■■□□□ 1.6
APTX-229ENST00000489583 RBM26Q5T8P6 1007 aaKnown RBP25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms