RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 TTLL11Q8NHH1 800 aa25.81■■□□□ 1.72
SND1-214ENST00000489417 STK32BQ9NY57 414 aa25.81■■□□□ 1.72
SND1-214ENST00000489417 MYH3P11055 1940 aa25.81■■□□□ 1.72
SND1-214ENST00000489417 CCDC57Q2TAC2 916 aa25.8■■□□□ 1.72
SND1-214ENST00000489417 ERFEQ4G0M1 354 aa25.8■■□□□ 1.72
SND1-214ENST00000489417 SIL1Q9H173 461 aa25.8■■□□□ 1.72
SND1-214ENST00000489417 ANO8Q9HCE9 1232 aaPredicted RBP25.8■■□□□ 1.72
SND1-214ENST00000489417 PNPLA7Q6ZV29 1317 aa25.79■■□□□ 1.72
SND1-214ENST00000489417 MSH5O43196 834 aa25.79■■□□□ 1.72
SND1-214ENST00000489417 GTF2E1P29083 439 aaPredicted RBP25.79■■□□□ 1.72
SND1-214ENST00000489417 SLC15A2Q16348 729 aa25.79■■□□□ 1.72
SND1-214ENST00000489417 CCDC85AQ96PX6 553 aaPredicted RBP25.79■■□□□ 1.72
SND1-214ENST00000489417 BCL11AQ9H165 835 aa25.79■■□□□ 1.72
SND1-214ENST00000489417 IFIT5Q13325 482 aaKnown RBP25.78■■□□□ 1.72
SND1-214ENST00000489417 SLC10A5Q5PT55 438 aa25.78■■□□□ 1.72
SND1-214ENST00000489417 TPTE2Q6XPS3 522 aa25.78■■□□□ 1.72
SND1-214ENST00000489417 C16orf71Q8IYS4 520 aaPredicted RBP25.78■■□□□ 1.72
SND1-214ENST00000489417 GREM2Q9H772 168 aa25.78■■□□□ 1.72
SND1-214ENST00000489417 IL1RAPL2Q9NP60 686 aa25.78■■□□□ 1.72
SND1-214ENST00000489417 ABCC12Q96J65 1359 aa25.77■■□□□ 1.72
SND1-214ENST00000489417 SOCS7O14512 581 aa25.76■■□□□ 1.71
SND1-214ENST00000489417 SASH1O94885 1247 aa25.76■■□□□ 1.71
SND1-214ENST00000489417 TM4SF1P30408 202 aa25.76■■□□□ 1.71
SND1-214ENST00000489417 QSER1Q2KHR3 1735 aa25.76■■□□□ 1.71
SND1-214ENST00000489417 ANKRD18BA2A2Z9 1011 aa25.75■■□□□ 1.71
SND1-214ENST00000489417 ITGA6P23229 1130 aa25.75■■□□□ 1.71
SND1-214ENST00000489417 TAF7LQ5H9L4 462 aa25.75■■□□□ 1.71
SND1-214ENST00000489417 PLEKHM2Q8IWE5 1019 aa25.75■■□□□ 1.71
SND1-214ENST00000489417 OTUD7AQ8TE49 926 aaPredicted RBP25.75■■□□□ 1.71
SND1-214ENST00000489417 ZNF594Q96JF6 807 aaPredicted RBP25.75■■□□□ 1.71
SND1-214ENST00000489417 RTL9Q8NET4 1388 aa25.74■■□□□ 1.71
SND1-214ENST00000489417 CCDC152Q4G0S7 254 aa25.74■■□□□ 1.71
SND1-214ENST00000489417 FBXO3Q9UK99 471 aa25.74■■□□□ 1.71
SND1-214ENST00000489417 EYA2O00167 538 aa25.73■■□□□ 1.71
SND1-214ENST00000489417 CIAO1O76071 339 aa25.73■■□□□ 1.71
SND1-214ENST00000489417 NLGN1Q8N2Q7 840 aa25.73■■□□□ 1.71
SND1-214ENST00000489417 NPHP1O15259 732 aa25.72■■□□□ 1.71
SND1-214ENST00000489417 CLASRPQ8N2M8 674 aaKnown RBP25.72■■□□□ 1.71
SND1-214ENST00000489417 CNBD1Q8NA66 436 aa25.72■■□□□ 1.71
SND1-214ENST00000489417 SALL3Q9BXA9 1300 aa25.72■■□□□ 1.71
SND1-214ENST00000489417 IL15P40933 162 aaPredicted RBP25.71■■□□□ 1.71
SND1-214ENST00000489417 SF3B3Q15393 1217 aaKnown RBP25.71■■□□□ 1.71
SND1-214ENST00000489417 ATG9AQ7Z3C6 839 aa25.71■■□□□ 1.71
SND1-214ENST00000489417 SERPINB2P05120 415 aa25.71■■□□□ 1.71
SND1-214ENST00000489417 DDR1Q08345 913 aa25.71■■□□□ 1.71
SND1-214ENST00000489417 LRRC24Q50LG9 513 aa25.71■■□□□ 1.71
SND1-214ENST00000489417 RIC1Q4ADV7 1423 aa25.7■■□□□ 1.7
SND1-214ENST00000489417 POLRMTO00411 1230 aaKnown RBP25.7■■□□□ 1.7
SND1-214ENST00000489417 C3orf67Q6ZVT6 689 aa25.7■■□□□ 1.7
SND1-214ENST00000489417 NLRP3Q96P20 1036 aa25.7■■□□□ 1.7
SND1-214ENST00000489417 PUS3Q9BZE2 481 aaKnown RBP25.7■■□□□ 1.7
SND1-214ENST00000489417 LRP5O75197 1615 aa25.69■■□□□ 1.7
SND1-214ENST00000489417 MX1P20591 662 aa25.69■■□□□ 1.7
SND1-214ENST00000489417 TFCP2Q12800 502 aa25.69■■□□□ 1.7
SND1-214ENST00000489417 PRR5LQ6MZQ0 368 aa25.69■■□□□ 1.7
SND1-214ENST00000489417 CCDC24Q8N4L8 307 aa25.69■■□□□ 1.7
SND1-214ENST00000489417 PDE1AP54750 535 aa25.68■■□□□ 1.7
SND1-214ENST00000489417 OSBPL3Q9H4L5 887 aa25.68■■□□□ 1.7
SND1-214ENST00000489417 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.68■■□□□ 1.7
SND1-214ENST00000489417 ST5P78524 1137 aa25.67■■□□□ 1.7
SND1-214ENST00000489417 AACSQ86V21 672 aa25.67■■□□□ 1.7
SND1-214ENST00000489417 SEC31BQ9NQW1 1179 aa25.67■■□□□ 1.7
SND1-214ENST00000489417 STAP2Q9UGK3 403 aa25.67■■□□□ 1.7
SND1-214ENST00000489417 CASZ1Q86V15 1759 aa25.67■■□□□ 1.7
SND1-214ENST00000489417 TNRC6CQ9HCJ0 1690 aaKnown RBP25.66■■□□□ 1.7
SND1-214ENST00000489417 IFIT2P09913 472 aaKnown RBP25.66■■□□□ 1.7
SND1-214ENST00000489417 TTC22Q5TAA0 569 aa25.66■■□□□ 1.7
SND1-214ENST00000489417 LDHAL6AQ6ZMR3 332 aa25.66■■□□□ 1.7
SND1-214ENST00000489417 AOX1Q06278 1338 aa25.66■■□□□ 1.7
SND1-214ENST00000489417 BMP2KLQ5H9B9 411 aa25.65■■□□□ 1.7
SND1-214ENST00000489417 EAF2Q96CJ1 260 aaPredicted RBP25.65■■□□□ 1.7
SND1-214ENST00000489417 CDC5LQ99459 802 aaKnown RBP25.65■■□□□ 1.7
SND1-214ENST00000489417 CNNM1Q9NRU3 951 aa25.65■■□□□ 1.7
SND1-214ENST00000489417 TNNI3KQ59H18 835 aa25.64■■□□□ 1.7
SND1-214ENST00000489417 GPR108Q9NPR9 543 aa25.64■■□□□ 1.7
SND1-214ENST00000489417 CEP126Q9P2H0 1117 aa25.64■■□□□ 1.7
SND1-214ENST00000489417 RIPOR2Q9Y4F9 1068 aa25.64■■□□□ 1.7
SND1-214ENST00000489417 FPGT-TNNI3KV9GXZ4 949 aa25.64■■□□□ 1.7
SND1-214ENST00000489417 IGHMBP2P38935 993 aaKnown RBP25.63■■□□□ 1.69
SND1-214ENST00000489417 MSL1Q68DK7 614 aa25.63■■□□□ 1.69
SND1-214ENST00000489417 UPF1Q92900 1129 aaKnown RBP eCLIP25.63■■□□□ 1.692e-7■■■■□ 25.6
SND1-214ENST00000489417 NRXN2Q9P2S2 1712 aa25.63■■□□□ 1.69
SND1-214ENST00000489417 MMP10P09238 476 aa25.63■■□□□ 1.69
SND1-214ENST00000489417 CCDC8Q9H0W5 538 aaPredicted RBP25.63■■□□□ 1.69
SND1-214ENST00000489417 PARP3Q9Y6F1 533 aa25.63■■□□□ 1.69
SND1-214ENST00000489417 GSPT1P15170 499 aaKnown RBP25.62■■□□□ 1.69
SND1-214ENST00000489417 TSHZ3Q63HK5 1081 aa25.62■■□□□ 1.69
SND1-214ENST00000489417 GPATCH3Q96I76 525 aa25.62■■□□□ 1.69
SND1-214ENST00000489417 MPHOSPH8Q99549 860 aa25.62■■□□□ 1.69
SND1-214ENST00000489417 ZNF609O15014 1411 aa25.61■■□□□ 1.69
SND1-214ENST00000489417 METTL24Q5JXM2 366 aa25.61■■□□□ 1.69
SND1-214ENST00000489417 TTC41PQ6P2S7 1318 aa25.61■■□□□ 1.69
SND1-214ENST00000489417 C8orf34Q49A92 452 aa25.6■■□□□ 1.69
SND1-214ENST00000489417 ANKRD18AQ8IVF6 992 aa25.6■■□□□ 1.69
SND1-214ENST00000489417 BACH2Q9BYV9 841 aa25.6■■□□□ 1.69
SND1-214ENST00000489417 ECHDC1Q9NTX5 307 aa25.59■■□□□ 1.69
SND1-214ENST00000489417 TLR7Q9NYK1 1049 aaKnown RBP25.59■■□□□ 1.69
SND1-214ENST00000489417 AKAP2Q9Y2D5 859 aa25.59■■□□□ 1.69
SND1-214ENST00000489417 MROH5Q6ZUA9 1318 aa25.59■■□□□ 1.69
SND1-214ENST00000489417 COL4A1P02462 1669 aa25.59■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms