RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 TEX13AQ9BXU3 409 aaPredicted RBP12.53□□□□□ -0.4
SSBP1-212ENST00000489378 ZNF408Q9H9D4 720 aa12.53□□□□□ -0.4
SSBP1-212ENST00000489378 HMOX1P09601 288 aa12.52□□□□□ -0.41
SSBP1-212ENST00000489378 NOGQ13253 232 aa12.52□□□□□ -0.41
SSBP1-212ENST00000489378 ZNF790Q6PG37 636 aa12.52□□□□□ -0.41
SSBP1-212ENST00000489378 NPM2Q86SE8 214 aaKnown RBP12.52□□□□□ -0.41
SSBP1-212ENST00000489378 LARGE2Q8N3Y3 721 aa12.52□□□□□ -0.41
SSBP1-212ENST00000489378 POLR3GLQ9BT43 218 aa12.52□□□□□ -0.41
SSBP1-212ENST00000489378 BOLA1Q9Y3E2 137 aa12.52□□□□□ -0.41
SSBP1-212ENST00000489378 FAM177BA6PVY3 158 aa12.51□□□□□ -0.41
SSBP1-212ENST00000489378 ALDH1B1P30837 517 aa12.51□□□□□ -0.41
SSBP1-212ENST00000489378 ADARB2Q9NS39 739 aaKnown RBP12.51□□□□□ -0.41
SSBP1-212ENST00000489378 GPRC5DQ9NZD1 345 aa12.51□□□□□ -0.41
SSBP1-212ENST00000489378 CLEC4GQ6UXB4 293 aa12.5□□□□□ -0.41
SSBP1-212ENST00000489378 TPTE2Q6XPS3 522 aa12.5□□□□□ -0.41
SSBP1-212ENST00000489378 MORC1Q86VD1 984 aa12.5□□□□□ -0.41
SSBP1-212ENST00000489378 MARVELD3Q96A59 401 aa12.5□□□□□ -0.41
SSBP1-212ENST00000489378 PGAP2Q9UHJ9 254 aa12.49□□□□□ -0.41
SSBP1-212ENST00000489378 NIP7Q9Y221 180 aaKnown RBP eCLIP12.49□□□□□ -0.41
SSBP1-212ENST00000489378 SIPA1L3O60292 1781 aaPredicted RBP12.49□□□□□ -0.41
SSBP1-212ENST00000489378 FAM155AB1AL88 458 aaPredicted RBP12.48□□□□□ -0.41
SSBP1-212ENST00000489378 KCNQ3O43525 872 aa12.48□□□□□ -0.41
SSBP1-212ENST00000489378 HUNKP57058 714 aa12.48□□□□□ -0.41
SSBP1-212ENST00000489378 DLK2Q6UY11 383 aa12.48□□□□□ -0.41
SSBP1-212ENST00000489378 IL17REQ8NFR9 667 aa12.48□□□□□ -0.41
SSBP1-212ENST00000489378 FMNL2Q96PY5 1086 aa12.48□□□□□ -0.41
SSBP1-212ENST00000489378 SAGE1Q9NXZ1 904 aa12.48□□□□□ -0.41
SSBP1-212ENST00000489378 ZNF652Q9Y2D9 606 aa12.48□□□□□ -0.41
SSBP1-212ENST00000489378 RIOK3O14730 519 aaKnown RBP12.47□□□□□ -0.41
SSBP1-212ENST00000489378 TRPA1O75762 1119 aa12.47□□□□□ -0.41
SSBP1-212ENST00000489378 GMPSP49915 693 aaPredicted RBP12.47□□□□□ -0.41
SSBP1-212ENST00000489378 HIRAP54198 1017 aaPredicted RBP12.47□□□□□ -0.41
SSBP1-212ENST00000489378 CRY2Q49AN0 593 aa12.47□□□□□ -0.41
SSBP1-212ENST00000489378 CC2D2BQ6DHV5 1058 aa12.47□□□□□ -0.41
SSBP1-212ENST00000489378 NIM1KQ8IY84 436 aa12.47□□□□□ -0.41
SSBP1-212ENST00000489378 PANK3Q9H999 370 aa12.47□□□□□ -0.41
SSBP1-212ENST00000489378 RNF186Q9NXI6 227 aa12.47□□□□□ -0.41
SSBP1-212ENST00000489378 USP16Q9Y5T5 823 aa12.47□□□□□ -0.41
SSBP1-212ENST00000489378 ABCC12Q96J65 1359 aa12.47□□□□□ -0.41
SSBP1-212ENST00000489378 PRAMEF22A3QJZ6 481 aa12.46□□□□□ -0.41
SSBP1-212ENST00000489378 KIF23Q02241 960 aaPredicted RBP12.46□□□□□ -0.41
SSBP1-212ENST00000489378 CXCL9Q07325 125 aa12.46□□□□□ -0.41
SSBP1-212ENST00000489378 TEFQ10587 303 aa12.46□□□□□ -0.41
SSBP1-212ENST00000489378 CTU1Q7Z7A3 348 aaKnown RBP12.46□□□□□ -0.41
SSBP1-212ENST00000489378 TRPM4Q8TD43 1214 aa12.46□□□□□ -0.41
SSBP1-212ENST00000489378 HPS5Q9UPZ3 1129 aa12.46□□□□□ -0.41
SSBP1-212ENST00000489378 NPC1L1Q9UHC9 1359 aa12.46□□□□□ -0.41
SSBP1-212ENST00000489378 TCERG1O14776 1098 aaKnown RBP12.45□□□□□ -0.42
SSBP1-212ENST00000489378 PPIP5K2O43314 1243 aa12.45□□□□□ -0.42
SSBP1-212ENST00000489378 AOC3Q16853 763 aa12.45□□□□□ -0.42
SSBP1-212ENST00000489378 HABP4Q5JVS0 413 aaKnown RBP12.45□□□□□ -0.42
SSBP1-212ENST00000489378 CDC37L1Q7L3B6 337 aa12.45□□□□□ -0.42
SSBP1-212ENST00000489378 NBPF15Q8N660 670 aa12.45□□□□□ -0.42
SSBP1-212ENST00000489378 AKAP11Q9UKA4 1901 aa12.45□□□□□ -0.42
SSBP1-212ENST00000489378 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.45□□□□□ -0.42
SSBP1-212ENST00000489378 SHTN1A0MZ66 631 aa12.45□□□□□ -0.42
SSBP1-212ENST00000489378 GTF2E1P29083 439 aaPredicted RBP12.45□□□□□ -0.42
SSBP1-212ENST00000489378 HLFQ16534 295 aa12.45□□□□□ -0.42
SSBP1-212ENST00000489378 RGMBQ6NW40 437 aa12.45□□□□□ -0.42
SSBP1-212ENST00000489378 USP48Q86UV5 1035 aa12.45□□□□□ -0.42
SSBP1-212ENST00000489378 NUTM1Q86Y26 1132 aa12.45□□□□□ -0.42
SSBP1-212ENST00000489378 ZC3H15Q8WU90 426 aaKnown RBP12.45□□□□□ -0.42
SSBP1-212ENST00000489378 GCC1Q96CN9 775 aa12.45□□□□□ -0.42
SSBP1-212ENST00000489378 ZFP91Q96JP5 570 aaPredicted RBP12.45□□□□□ -0.42
SSBP1-212ENST00000489378 NBPF26B4DH59 902 aa12.44□□□□□ -0.42
SSBP1-212ENST00000489378 HOXB3P14651 431 aaPredicted RBP12.44□□□□□ -0.42
SSBP1-212ENST00000489378 HOXA10P31260 410 aaPredicted RBP12.44□□□□□ -0.42
SSBP1-212ENST00000489378 NBPF10Q6P3W6 841 aaKnown RBP12.44□□□□□ -0.42
SSBP1-212ENST00000489378 POTEB3A0JP26 581 aa12.43□□□□□ -0.42
SSBP1-212ENST00000489378 PPEF1O14829 653 aaPredicted RBP12.43□□□□□ -0.42
SSBP1-212ENST00000489378 GRIPAP1Q4V328 841 aa12.43□□□□□ -0.42
SSBP1-212ENST00000489378 POTEBQ6S5H4 581 aa12.43□□□□□ -0.42
SSBP1-212ENST00000489378 RPGRQ92834 1020 aaKnown RBP12.43□□□□□ -0.42
SSBP1-212ENST00000489378 ZNRF3Q9ULT6 936 aa12.43□□□□□ -0.42
SSBP1-212ENST00000489378 GNAT3A8MTJ3 354 aa12.42□□□□□ -0.42
SSBP1-212ENST00000489378 RGL2O15211 777 aa12.42□□□□□ -0.42
SSBP1-212ENST00000489378 MS4A4AQ96JQ5 239 aa12.42□□□□□ -0.42
SSBP1-212ENST00000489378 CSRNP1Q96S65 589 aa12.42□□□□□ -0.42
SSBP1-212ENST00000489378 POLR2AP24928 1970 aaKnown RBP12.42□□□□□ -0.42
SSBP1-212ENST00000489378 MKI67P46013 3256 aaKnown RBP12.42□□□□□ -0.42
SSBP1-212ENST00000489378 BTBD11A6QL63 1104 aa12.41□□□□□ -0.42
SSBP1-212ENST00000489378 ZNF157P51786 506 aaPredicted RBP12.41□□□□□ -0.42
SSBP1-212ENST00000489378 CCDC102AQ96A19 550 aa12.41□□□□□ -0.42
SSBP1-212ENST00000489378 BCL2L13Q9BXK5 485 aa12.41□□□□□ -0.42
SSBP1-212ENST00000489378 GBA2Q9HCG7 927 aaPredicted RBP12.41□□□□□ -0.42
SSBP1-212ENST00000489378 RIC1Q4ADV7 1423 aa12.41□□□□□ -0.42
SSBP1-212ENST00000489378 KIF7Q2M1P5 1343 aa12.41□□□□□ -0.42
SSBP1-212ENST00000489378 CEMIPQ8WUJ3 1361 aa12.4□□□□□ -0.42
SSBP1-212ENST00000489378 RAD17O75943 681 aa12.4□□□□□ -0.42
SSBP1-212ENST00000489378 CRAMP1Q96RY5 1269 aa12.4□□□□□ -0.42
SSBP1-212ENST00000489378 CNOT7Q9UIV1 285 aaKnown RBP12.4□□□□□ -0.42
SSBP1-212ENST00000489378 CDHR2Q9BYE9 1310 aa12.4□□□□□ -0.42
SSBP1-212ENST00000489378 SLC10A3P09131 477 aa12.39□□□□□ -0.43
SSBP1-212ENST00000489378 RBM17Q96I25 401 aaKnown RBP12.39□□□□□ -0.43
SSBP1-212ENST00000489378 NYXQ9GZU5 481 aa12.39□□□□□ -0.43
SSBP1-212ENST00000489378 ADM5C9JUS6 153 aa12.38□□□□□ -0.43
SSBP1-212ENST00000489378 G3V3G9 751 aa12.38□□□□□ -0.43
SSBP1-212ENST00000489378 DIAPH1O60610 1272 aaKnown RBP12.38□□□□□ -0.43
SSBP1-212ENST00000489378 SNRPA1P09661 255 aaKnown RBP12.38□□□□□ -0.43
SSBP1-212ENST00000489378 FXR1P51114 621 aaKnown RBP eCLIP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms