RNA–Protein interactions for RNA: ENST00000489333.1

GABRE-210, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 2

Gene GABRE, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-210ENST00000489333 RAD50Q92878 1312 aa10.4□□□□□ -0.74
GABRE-210ENST00000489333 SURF6O75683 361 aaKnown RBP10.4□□□□□ -0.74
GABRE-210ENST00000489333 CD2BP2O95400 341 aaKnown RBP10.4□□□□□ -0.74
GABRE-210ENST00000489333 YBX3P16989 372 aaKnown RBP eCLIP10.4□□□□□ -0.74
GABRE-210ENST00000489333 MCM5P33992 734 aa10.4□□□□□ -0.74
GABRE-210ENST00000489333 NASPP49321 788 aaPredicted RBP10.4□□□□□ -0.74
GABRE-210ENST00000489333 RHPN1Q8TCX5 695 aa10.4□□□□□ -0.74
GABRE-210ENST00000489333 SMARCC1Q92922 1105 aaPredicted RBP10.4□□□□□ -0.74
GABRE-210ENST00000489333 ZSCAN31Q96LW9 406 aaPredicted RBP10.4□□□□□ -0.74
GABRE-210ENST00000489333 AK7Q96M32 723 aa10.4□□□□□ -0.74
GABRE-210ENST00000489333 ANO2Q9NQ90 1003 aa10.4□□□□□ -0.74
GABRE-210ENST00000489333 MIS18AQ9NYP9 233 aa10.4□□□□□ -0.74
GABRE-210ENST00000489333 EXOC6BQ9Y2D4 811 aa10.4□□□□□ -0.74
GABRE-210ENST00000489333 HEG1Q9ULI3 1381 aa10.39□□□□□ -0.75
GABRE-210ENST00000489333 BTBD11A6QL63 1104 aa10.39□□□□□ -0.75
GABRE-210ENST00000489333 SRGAP3O43295 1099 aa10.39□□□□□ -0.75
GABRE-210ENST00000489333 BEND3Q5T5X7 828 aa10.39□□□□□ -0.75
GABRE-210ENST00000489333 KSR2Q6VAB6 950 aa10.39□□□□□ -0.75
GABRE-210ENST00000489333 SMIM5Q71RC9 77 aa10.39□□□□□ -0.75
GABRE-210ENST00000489333 RASEFQ8IZ41 740 aa10.39□□□□□ -0.75
GABRE-210ENST00000489333 FAM184AQ8NB25 1140 aa10.39□□□□□ -0.75
GABRE-210ENST00000489333 FLAD1Q8NFF5 587 aa10.39□□□□□ -0.75
GABRE-210ENST00000489333 OTUD7AQ8TE49 926 aaPredicted RBP10.39□□□□□ -0.75
GABRE-210ENST00000489333 PIGBQ92521 554 aa10.39□□□□□ -0.75
GABRE-210ENST00000489333 RILPL2Q969X0 211 aa10.39□□□□□ -0.75
GABRE-210ENST00000489333 TMX3Q96JJ7 454 aa10.39□□□□□ -0.75
GABRE-210ENST00000489333 TM6SF1Q9BZW5 370 aa10.39□□□□□ -0.75
GABRE-210ENST00000489333 LMBRD1Q9NUN5 540 aa10.39□□□□□ -0.75
GABRE-210ENST00000489333 SPG7Q9UQ90 795 aa10.39□□□□□ -0.75
GABRE-210ENST00000489333 SIPA1L3O60292 1781 aaPredicted RBP10.39□□□□□ -0.75
GABRE-210ENST00000489333 UTYO14607 1347 aa10.38□□□□□ -0.75
GABRE-210ENST00000489333 PNMA6EA0A0J9YXQ4 647 aa10.38□□□□□ -0.75
GABRE-210ENST00000489333 ESPNB1AK53 854 aa10.38□□□□□ -0.75
GABRE-210ENST00000489333 APBB1O00213 710 aa10.38□□□□□ -0.75
GABRE-210ENST00000489333 GIGYF1O75420 1035 aaPredicted RBP10.38□□□□□ -0.75
GABRE-210ENST00000489333 BRD1O95696 1058 aa10.38□□□□□ -0.75
GABRE-210ENST00000489333 C1QTNF8P60827 252 aa10.38□□□□□ -0.75
GABRE-210ENST00000489333 MCTP1Q6DN14 999 aa10.38□□□□□ -0.75
GABRE-210ENST00000489333 ZNF530Q6P9A1 599 aaPredicted RBP10.38□□□□□ -0.75
GABRE-210ENST00000489333 PPP1R42Q7Z4L9 355 aa10.38□□□□□ -0.75
GABRE-210ENST00000489333 LINS1Q8NG48 757 aa10.38□□□□□ -0.75
GABRE-210ENST00000489333 CHMP4CQ96CF2 233 aa10.38□□□□□ -0.75
GABRE-210ENST00000489333 SH2B1Q9NRF2 756 aaPredicted RBP10.38□□□□□ -0.75
GABRE-210ENST00000489333 TMOD3Q9NYL9 352 aa10.38□□□□□ -0.75
GABRE-210ENST00000489333 COL15A1P39059 1388 aa10.38□□□□□ -0.75
GABRE-210ENST00000489333 SGSM2O43147 1006 aa10.37□□□□□ -0.75
GABRE-210ENST00000489333 RNMTO43148 476 aaKnown RBP10.37□□□□□ -0.75
GABRE-210ENST00000489333 GRIN3BO60391 1043 aa10.37□□□□□ -0.75
GABRE-210ENST00000489333 HMGB2P26583 209 aaKnown RBP10.37□□□□□ -0.75
GABRE-210ENST00000489333 TERF1P54274 439 aa10.37□□□□□ -0.75
GABRE-210ENST00000489333 ANKRD1Q15327 319 aa10.37□□□□□ -0.75
GABRE-210ENST00000489333 RNF20Q5VTR2 975 aa10.37□□□□□ -0.75
GABRE-210ENST00000489333 AMIGO3Q86WK7 504 aa10.37□□□□□ -0.75
GABRE-210ENST00000489333 LINC00116Q8NCU8 138 aa10.37□□□□□ -0.75
GABRE-210ENST00000489333 EVI5LQ96CN4 794 aa10.37□□□□□ -0.75
GABRE-210ENST00000489333 ECHDC1Q9NTX5 307 aa10.37□□□□□ -0.75
GABRE-210ENST00000489333 WWC3Q9ULE0 1092 aa10.37□□□□□ -0.75
GABRE-210ENST00000489333 RFX7Q2KHR2 1363 aa10.37□□□□□ -0.75
GABRE-210ENST00000489333 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.36□□□□□ -0.75
GABRE-210ENST00000489333 LOC102724428A0A0B4J2F2 783 aa10.36□□□□□ -0.75
GABRE-210ENST00000489333 ZKSCAN1P17029 563 aaPredicted RBP10.36□□□□□ -0.75
GABRE-210ENST00000489333 PSMA5P28066 241 aa10.36□□□□□ -0.75
GABRE-210ENST00000489333 SIK1P57059 783 aa10.36□□□□□ -0.75
GABRE-210ENST00000489333 NEXNQ0ZGT2 675 aa10.36□□□□□ -0.75
GABRE-210ENST00000489333 OS9Q13438 667 aaPredicted RBP10.36□□□□□ -0.75
GABRE-210ENST00000489333 NKX1-1Q15270 411 aaPredicted RBP10.36□□□□□ -0.75
GABRE-210ENST00000489333 ZSCAN23Q3MJ62 389 aa10.36□□□□□ -0.75
GABRE-210ENST00000489333 TMEM87AQ8NBN3 555 aa10.36□□□□□ -0.75
GABRE-210ENST00000489333 PI4K2BQ8TCG2 481 aa10.36□□□□□ -0.75
GABRE-210ENST00000489333 DDX21Q9NR30 783 aaKnown RBP eCLIP10.36□□□□□ -0.75
GABRE-210ENST00000489333 DIAPH3Q9NSV4 1193 aa10.36□□□□□ -0.75
GABRE-210ENST00000489333 C9orf78Q9NZ63 289 aaPredicted RBP10.36□□□□□ -0.75
GABRE-210ENST00000489333 LIMCH1Q9UPQ0 1083 aa10.36□□□□□ -0.75
GABRE-210ENST00000489333 CD2APQ9Y5K6 639 aa10.36□□□□□ -0.75
GABRE-210ENST00000489333 PI4KAP2A4QPH2 592 aa10.35□□□□□ -0.75
GABRE-210ENST00000489333 GNPATO15228 680 aa10.35□□□□□ -0.75
GABRE-210ENST00000489333 IFIT2P09913 472 aaKnown RBP10.35□□□□□ -0.75
GABRE-210ENST00000489333 PHKG2P15735 406 aa10.35□□□□□ -0.75
GABRE-210ENST00000489333 ATP6V1AP38606 617 aa10.35□□□□□ -0.75
GABRE-210ENST00000489333 UVSSAQ2YD98 709 aa10.35□□□□□ -0.75
GABRE-210ENST00000489333 VPS53Q5VIR6 699 aa10.35□□□□□ -0.75
GABRE-210ENST00000489333 LRSAM1Q6UWE0 723 aa10.35□□□□□ -0.75
GABRE-210ENST00000489333 ZSCAN30Q86W11 494 aa10.35□□□□□ -0.75
GABRE-210ENST00000489333 IFNL2Q8IZJ0 200 aa10.35□□□□□ -0.75
GABRE-210ENST00000489333 PI4KAP1Q8N8J0 262 aa10.35□□□□□ -0.75
GABRE-210ENST00000489333 ZNF579Q8NAF0 562 aaKnown RBP10.35□□□□□ -0.75
GABRE-210ENST00000489333 KCNB2Q92953 911 aa10.35□□□□□ -0.75
GABRE-210ENST00000489333 RTN4Q9NQC3 1192 aaKnown RBP10.35□□□□□ -0.75
GABRE-210ENST00000489333 SNRKQ9NRH2 765 aa10.35□□□□□ -0.75
GABRE-210ENST00000489333 CHPF2Q9P2E5 772 aa10.35□□□□□ -0.75
GABRE-210ENST00000489333 ASAP1Q9ULH1 1129 aa10.35□□□□□ -0.75
GABRE-210ENST00000489333 ERBB4Q15303 1308 aa10.34□□□□□ -0.75
GABRE-210ENST00000489333 PDCP20941 246 aa10.34□□□□□ -0.75
GABRE-210ENST00000489333 MSNP26038 577 aaKnown RBP10.34□□□□□ -0.75
GABRE-210ENST00000489333 ITPK1Q13572 414 aa10.34□□□□□ -0.75
GABRE-210ENST00000489333 ALDH8A1Q9H2A2 487 aaPredicted RBP10.34□□□□□ -0.75
GABRE-210ENST00000489333 HMG20BQ9P0W2 317 aa10.34□□□□□ -0.75
GABRE-210ENST00000489333 SCN11AQ9UI33 1791 aa10.34□□□□□ -0.75
GABRE-210ENST00000489333 COL5A3P25940 1745 aaPredicted RBP10.33□□□□□ -0.76
GABRE-210ENST00000489333 GRM8O00222 908 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms