RNA–Protein interactions for RNA: ENST00000489283.5

PLS3-207, Transcript of plastin 3, humanhuman

TSL 1 (best)

Gene PLS3, Length 926 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLS3-207ENST00000489283 RTL5Q5HYW3 569 aaPredicted RBP18.16■□□□□ 0.5
PLS3-207ENST00000489283 PNMA8AQ86V59 439 aaPredicted RBP18.16■□□□□ 0.5
PLS3-207ENST00000489283 MPNDQ8N594 471 aa18.16■□□□□ 0.5
PLS3-207ENST00000489283 VPS33BQ9H267 617 aa18.16■□□□□ 0.5
PLS3-207ENST00000489283 CLEC11AQ9Y240 323 aa18.16■□□□□ 0.5
PLS3-207ENST00000489283 LMOD1P29536 600 aaPredicted RBP18.15■□□□□ 0.5
PLS3-207ENST00000489283 SCNN1DP51172 638 aa18.15■□□□□ 0.5
PLS3-207ENST00000489283 TRIM28Q13263 835 aaKnown RBP18.15■□□□□ 0.5
PLS3-207ENST00000489283 IFFO2Q5TF58 517 aa18.15■□□□□ 0.5
PLS3-207ENST00000489283 TSPYL6Q8N831 410 aa18.15■□□□□ 0.5
PLS3-207ENST00000489283 TSR2Q969E8 191 aaKnown RBP18.15■□□□□ 0.5
PLS3-207ENST00000489283 MYH3P11055 1940 aa18.15■□□□□ 0.5
PLS3-207ENST00000489283 IRS4O14654 1257 aaPredicted RBP18.14■□□□□ 0.49
PLS3-207ENST00000489283 SF3B3Q15393 1217 aaKnown RBP18.14■□□□□ 0.49
PLS3-207ENST00000489283 CCDC27Q2M243 656 aa18.14■□□□□ 0.49
PLS3-207ENST00000489283 TMC4Q7Z404 712 aa18.14■□□□□ 0.49
PLS3-207ENST00000489283 CELF1Q92879 486 aaKnown RBP18.14■□□□□ 0.49
PLS3-207ENST00000489283 MYD88Q99836 296 aa18.14■□□□□ 0.49
PLS3-207ENST00000489283 SPEF2Q9C093 1822 aa18.14■□□□□ 0.49
PLS3-207ENST00000489283 TRPM7Q96QT4 1865 aa18.14■□□□□ 0.49
PLS3-207ENST00000489283 ITGBL1O95965 494 aaPredicted RBP18.13■□□□□ 0.49
PLS3-207ENST00000489283 KIAA2012Q0VF49 1180 aa18.13■□□□□ 0.49
PLS3-207ENST00000489283 CCDC30Q5VVM6 783 aa18.13■□□□□ 0.49
PLS3-207ENST00000489283 MAP1SQ66K74 1059 aaPredicted RBP18.13■□□□□ 0.49
PLS3-207ENST00000489283 MRS2Q9HD23 443 aa18.13■□□□□ 0.49
PLS3-207ENST00000489283 ZNF316A6NFI3 1004 aaPredicted RBP18.12■□□□□ 0.49
PLS3-207ENST00000489283 EPS15P42566 896 aa18.12■□□□□ 0.49
PLS3-207ENST00000489283 WWC1Q8IX03 1113 aa18.12■□□□□ 0.49
PLS3-207ENST00000489283 ZBTB38Q8NAP3 1195 aaPredicted RBP18.12■□□□□ 0.49
PLS3-207ENST00000489283 MKRN1Q9UHC7 482 aaKnown RBP18.12■□□□□ 0.49
PLS3-207ENST00000489283 ZNRF3Q9ULT6 936 aa18.12■□□□□ 0.49
PLS3-207ENST00000489283 CACNA1FO60840 1977 aa18.11■□□□□ 0.49
PLS3-207ENST00000489283 ANP32CO43423 234 aa18.11■□□□□ 0.49
PLS3-207ENST00000489283 DDX58O95786 925 aaKnown RBP18.11■□□□□ 0.49
PLS3-207ENST00000489283 CXCL9Q07325 125 aa18.11■□□□□ 0.49
PLS3-207ENST00000489283 CNTROBQ8N137 903 aa18.11■□□□□ 0.49
PLS3-207ENST00000489283 CNTNAP1P78357 1384 aa18.11■□□□□ 0.49
PLS3-207ENST00000489283 PCNTO95613 3336 aa18.1■□□□□ 0.49
PLS3-207ENST00000489283 CCDC191Q8NCU4 936 aa18.1■□□□□ 0.49
PLS3-207ENST00000489283 METTL22Q9BUU2 404 aaPredicted RBP18.1■□□□□ 0.49
PLS3-207ENST00000489283 CHMP4AQ9BY43 222 aa18.1■□□□□ 0.49
PLS3-207ENST00000489283 TMEM88BA6NKF7 163 aa18.09■□□□□ 0.49
PLS3-207ENST00000489283 PCCAP05165 728 aaPredicted RBP18.09■□□□□ 0.49
PLS3-207ENST00000489283 HSPA1AP0DMV8 641 aaKnown RBP18.09■□□□□ 0.49
PLS3-207ENST00000489283 HSPA1BP0DMV9 641 aaKnown RBP18.09■□□□□ 0.49
PLS3-207ENST00000489283 CWC25Q9NXE8 425 aaPredicted RBP18.09■□□□□ 0.49
PLS3-207ENST00000489283 GPRC5DQ9NZD1 345 aa18.09■□□□□ 0.49
PLS3-207ENST00000489283 MAP3K2Q9Y2U5 619 aa18.09■□□□□ 0.49
PLS3-207ENST00000489283 IL16Q14005 1332 aa18.08■□□□□ 0.49
PLS3-207ENST00000489283 YDJCA8MPS7 323 aa18.08■□□□□ 0.48
PLS3-207ENST00000489283 GMPSP49915 693 aaPredicted RBP18.08■□□□□ 0.48
PLS3-207ENST00000489283 GPSM2P81274 684 aa18.08■□□□□ 0.48
PLS3-207ENST00000489283 TWISTNBQ3B726 338 aaPredicted RBP18.08■□□□□ 0.48
PLS3-207ENST00000489283 CIAPIN1Q6FI81 312 aa18.08■□□□□ 0.48
PLS3-207ENST00000489283 USP50Q70EL3 339 aaPredicted RBP18.08■□□□□ 0.48
PLS3-207ENST00000489283 JARID2Q92833 1246 aaPredicted RBP18.08■□□□□ 0.48
PLS3-207ENST00000489283 STK31Q9BXU1 1019 aa18.08■□□□□ 0.48
PLS3-207ENST00000489283 NSFL1CQ9UNZ2 370 aaKnown RBP18.08■□□□□ 0.48
PLS3-207ENST00000489283 RAD17O75943 681 aa18.07■□□□□ 0.48
PLS3-207ENST00000489283 HSP90B1P14625 803 aaKnown RBP18.07■□□□□ 0.48
PLS3-207ENST00000489283 SEC31BQ9NQW1 1179 aa18.07■□□□□ 0.48
PLS3-207ENST00000489283 ADARB2Q9NS39 739 aaKnown RBP18.07■□□□□ 0.48
PLS3-207ENST00000489283 SCN9AQ15858 1988 aa18.07■□□□□ 0.48
PLS3-207ENST00000489283 PSME4Q14997 1843 aa18.07■□□□□ 0.48
PLS3-207ENST00000489283 CDHR2Q9BYE9 1310 aa18.06■□□□□ 0.48
PLS3-207ENST00000489283 FANCIQ9NVI1 1328 aa18.06■□□□□ 0.48
PLS3-207ENST00000489283 PI4KAP2A4QPH2 592 aa18.06■□□□□ 0.48
PLS3-207ENST00000489283 PDE8AO60658 829 aa18.06■□□□□ 0.48
PLS3-207ENST00000489283 RPS8P62241 208 aaKnown RBP18.06■□□□□ 0.48
PLS3-207ENST00000489283 WASHC4Q2M389 1173 aa18.06■□□□□ 0.48
PLS3-207ENST00000489283 NCBP3Q53F19 620 aaKnown RBP18.06■□□□□ 0.48
PLS3-207ENST00000489283 KSR2Q6VAB6 950 aa18.06■□□□□ 0.48
PLS3-207ENST00000489283 PI4KAP1Q8N8J0 262 aa18.06■□□□□ 0.48
PLS3-207ENST00000489283 C6orf229H3BNL8 230 aa18.05■□□□□ 0.48
PLS3-207ENST00000489283 TNIP1Q15025 636 aa18.05■□□□□ 0.48
PLS3-207ENST00000489283 CCDC152Q4G0S7 254 aa18.05■□□□□ 0.48
PLS3-207ENST00000489283 CCDC85AQ96PX6 553 aaPredicted RBP18.05■□□□□ 0.48
PLS3-207ENST00000489283 BCL2L13Q9BXK5 485 aa18.05■□□□□ 0.48
PLS3-207ENST00000489283 DBNDD1Q9H9R9 158 aa18.05■□□□□ 0.48
PLS3-207ENST00000489283 POLLQ9UGP5 575 aa18.05■□□□□ 0.48
PLS3-207ENST00000489283 THSD7BQ9C0I4 1608 aa18.05■□□□□ 0.48
PLS3-207ENST00000489283 RIMBP2O15034 1052 aa18.04■□□□□ 0.48
PLS3-207ENST00000489283 IGKV5-2P06315 115 aa18.04■□□□□ 0.48
PLS3-207ENST00000489283 FMR1Q06787 632 aaKnown RBP eCLIP18.04■□□□□ 0.48
PLS3-207ENST00000489283 COL13A1Q5TAT6 717 aaPredicted RBP18.04■□□□□ 0.48
PLS3-207ENST00000489283 G2E3Q7L622 706 aa18.04■□□□□ 0.48
PLS3-207ENST00000489283 GPR101Q96P66 508 aaPredicted RBP18.04■□□□□ 0.48
PLS3-207ENST00000489283 SALL2Q9Y467 1007 aaPredicted RBP18.04■□□□□ 0.48
PLS3-207ENST00000489283 NEXNQ0ZGT2 675 aa18.03■□□□□ 0.48
PLS3-207ENST00000489283 TBC1D16Q8TBP0 767 aa18.03■□□□□ 0.48
PLS3-207ENST00000489283 EYA3Q99504 573 aa18.03■□□□□ 0.48
PLS3-207ENST00000489283 SHTN1A0MZ66 631 aa18.02■□□□□ 0.48
PLS3-207ENST00000489283 RASSF10A6NK89 507 aa18.02■□□□□ 0.48
PLS3-207ENST00000489283 ECE2O60344 883 aa18.02■□□□□ 0.48
PLS3-207ENST00000489283 SLC4A2P04920 1241 aa18.02■□□□□ 0.48
PLS3-207ENST00000489283 VEGFBP49765 207 aa18.02■□□□□ 0.48
PLS3-207ENST00000489283 CWF19L2Q2TBE0 894 aaKnown RBP18.02■□□□□ 0.48
PLS3-207ENST00000489283 PODXL2Q9NZ53 605 aa18.02■□□□□ 0.48
PLS3-207ENST00000489283 ABT1Q9ULW3 272 aaKnown RBP18.02■□□□□ 0.48
PLS3-207ENST00000489283 NEURL1BA8MQ27 555 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms