RNA–Protein interactions for RNA: ENST00000489158.1

EXOSC1-211, Transcript of exosome component 1, humanhuman

TSL 2

Gene EXOSC1, Length 2,113 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-211ENST00000489158 POLA2Q14181 598 aa10.91□□□□□ -0.66
EXOSC1-211ENST00000489158 RABEP1Q15276 862 aa10.91□□□□□ -0.66
EXOSC1-211ENST00000489158 UBE3BQ7Z3V4 1068 aa10.91□□□□□ -0.66
EXOSC1-211ENST00000489158 JARID2Q92833 1246 aaPredicted RBP10.91□□□□□ -0.66
EXOSC1-211ENST00000489158 ZNF652Q9Y2D9 606 aa10.91□□□□□ -0.66
EXOSC1-211ENST00000489158 PLSCR1O15162 318 aa10.91□□□□□ -0.66
EXOSC1-211ENST00000489158 NUCB2P80303 420 aa10.91□□□□□ -0.66
EXOSC1-211ENST00000489158 SUCLG2Q96I99 432 aa10.91□□□□□ -0.66
EXOSC1-211ENST00000489158 EXOC6BQ9Y2D4 811 aa10.91□□□□□ -0.66
EXOSC1-211ENST00000489158 R3HCC1Q9Y3T6 440 aaKnown RBP10.91□□□□□ -0.66
EXOSC1-211ENST00000489158 CYP2E1P05181 493 aaPredicted RBP10.9□□□□□ -0.66
EXOSC1-211ENST00000489158 CASP7P55210 303 aa10.9□□□□□ -0.66
EXOSC1-211ENST00000489158 PKP1Q13835 747 aa10.9□□□□□ -0.66
EXOSC1-211ENST00000489158 HLFQ16534 295 aa10.9□□□□□ -0.66
EXOSC1-211ENST00000489158 HSP90AB4PQ58FF6 505 aa10.9□□□□□ -0.66
EXOSC1-211ENST00000489158 CLEC4GQ6UXB4 293 aa10.9□□□□□ -0.66
EXOSC1-211ENST00000489158 PLEKHM2Q8IWE5 1019 aa10.9□□□□□ -0.66
EXOSC1-211ENST00000489158 BICC1Q9H694 974 aaKnown RBP10.9□□□□□ -0.66
EXOSC1-211ENST00000489158 UBR3Q6ZT12 1888 aa10.9□□□□□ -0.66
EXOSC1-211ENST00000489158 EP400Q96L91 3159 aa10.9□□□□□ -0.66
EXOSC1-211ENST00000489158 C4AP0C0L4 1744 aa10.9□□□□□ -0.67
EXOSC1-211ENST00000489158 CAMTA2O94983 1202 aa10.9□□□□□ -0.67
EXOSC1-211ENST00000489158 PCCAP05165 728 aaPredicted RBP10.9□□□□□ -0.67
EXOSC1-211ENST00000489158 ADRA2BP18089 450 aa10.9□□□□□ -0.67
EXOSC1-211ENST00000489158 GPTP24298 496 aa10.9□□□□□ -0.67
EXOSC1-211ENST00000489158 RABL6Q3YEC7 729 aaPredicted RBP10.9□□□□□ -0.67
EXOSC1-211ENST00000489158 RTCBQ9Y3I0 505 aaKnown RBP10.9□□□□□ -0.67
EXOSC1-211ENST00000489158 LAMB2P55268 1798 aa10.9□□□□□ -0.67
EXOSC1-211ENST00000489158 CDHR2Q9BYE9 1310 aa10.89□□□□□ -0.67
EXOSC1-211ENST00000489158 RAB11FIP3O75154 756 aa10.89□□□□□ -0.67
EXOSC1-211ENST00000489158 TERF1P54274 439 aa10.89□□□□□ -0.67
EXOSC1-211ENST00000489158 PARP10Q53GL7 1025 aa10.89□□□□□ -0.67
EXOSC1-211ENST00000489158 HS1BP3Q53T59 392 aa10.89□□□□□ -0.67
EXOSC1-211ENST00000489158 ZNF34Q8IZ26 560 aa10.89□□□□□ -0.67
EXOSC1-211ENST00000489158 USP26Q9BXU7 913 aa10.89□□□□□ -0.67
EXOSC1-211ENST00000489158 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.89□□□□□ -0.67
EXOSC1-211ENST00000489158 RBM27Q9P2N5 1060 aaKnown RBP10.89□□□□□ -0.67
EXOSC1-211ENST00000489158 NOL7Q9UMY1 257 aaKnown RBP10.89□□□□□ -0.67
EXOSC1-211ENST00000489158 MYH3P11055 1940 aa10.88□□□□□ -0.67
EXOSC1-211ENST00000489158 PRPF40AO75400 957 aaKnown RBP10.88□□□□□ -0.67
EXOSC1-211ENST00000489158 SURF6O75683 361 aaKnown RBP10.88□□□□□ -0.67
EXOSC1-211ENST00000489158 NLRP10Q86W26 655 aa10.88□□□□□ -0.67
EXOSC1-211ENST00000489158 C16orf71Q8IYS4 520 aaPredicted RBP10.88□□□□□ -0.67
EXOSC1-211ENST00000489158 ZBTB38Q8NAP3 1195 aaPredicted RBP10.88□□□□□ -0.67
EXOSC1-211ENST00000489158 KAZALD1Q96I82 304 aa10.88□□□□□ -0.67
EXOSC1-211ENST00000489158 AK7Q96M32 723 aa10.88□□□□□ -0.67
EXOSC1-211ENST00000489158 PLA2G12BQ9BX93 195 aa10.88□□□□□ -0.67
EXOSC1-211ENST00000489158 COL24A1Q17RW2 1714 aa10.88□□□□□ -0.67
EXOSC1-211ENST00000489158 GNPATO15228 680 aa10.88□□□□□ -0.67
EXOSC1-211ENST00000489158 SMARCA5O60264 1052 aaPredicted RBP10.88□□□□□ -0.67
EXOSC1-211ENST00000489158 HSP90B1P14625 803 aaKnown RBP10.88□□□□□ -0.67
EXOSC1-211ENST00000489158 OS9Q13438 667 aaPredicted RBP10.88□□□□□ -0.67
EXOSC1-211ENST00000489158 TTC22Q5TAA0 569 aa10.88□□□□□ -0.67
EXOSC1-211ENST00000489158 GPT2Q8TD30 523 aa10.88□□□□□ -0.67
EXOSC1-211ENST00000489158 PDLIM2Q96JY6 352 aa10.88□□□□□ -0.67
EXOSC1-211ENST00000489158 NARFQ9UHQ1 456 aa10.88□□□□□ -0.67
EXOSC1-211ENST00000489158 CHMP3Q9Y3E7 222 aa10.88□□□□□ -0.67
EXOSC1-211ENST00000489158 ZNF500O60304 480 aaPredicted RBP10.87□□□□□ -0.67
EXOSC1-211ENST00000489158 TXNRD1Q16881 649 aa10.87□□□□□ -0.67
EXOSC1-211ENST00000489158 LRRCC1Q9C099 1032 aa10.87□□□□□ -0.67
EXOSC1-211ENST00000489158 EPHA10Q5JZY3 1008 aa10.87□□□□□ -0.67
EXOSC1-211ENST00000489158 ERC1Q8IUD2 1116 aa10.87□□□□□ -0.67
EXOSC1-211ENST00000489158 ZGPATQ8N5A5 531 aaKnown RBP10.87□□□□□ -0.67
EXOSC1-211ENST00000489158 CWC22Q9HCG8 908 aaKnown RBP10.87□□□□□ -0.67
EXOSC1-211ENST00000489158 LRRC4BQ9NT99 713 aa10.87□□□□□ -0.67
EXOSC1-211ENST00000489158 FAM13BQ9NYF5 915 aa10.87□□□□□ -0.67
EXOSC1-211ENST00000489158 FAM89AQ96GI7 184 aa10.86□□□□□ -0.67
EXOSC1-211ENST00000489158 ZDHHC9Q9Y397 364 aa10.86□□□□□ -0.67
EXOSC1-211ENST00000489158 UBN2Q6ZU65 1347 aa10.85□□□□□ -0.67
EXOSC1-211ENST00000489158 FAM177BA6PVY3 158 aa10.85□□□□□ -0.67
EXOSC1-211ENST00000489158 ZPR1O75312 459 aa10.85□□□□□ -0.67
EXOSC1-211ENST00000489158 APBA3O96018 575 aa10.85□□□□□ -0.67
EXOSC1-211ENST00000489158 TRAPPC3LQ5T215 181 aa10.85□□□□□ -0.67
EXOSC1-211ENST00000489158 KIF1BPQ96EK5 621 aa10.85□□□□□ -0.67
EXOSC1-211ENST00000489158 CHAMP1Q96JM3 812 aa10.85□□□□□ -0.67
EXOSC1-211ENST00000489158 TRMT112Q9UI30 125 aaKnown RBP10.85□□□□□ -0.67
EXOSC1-211ENST00000489158 PA2G4Q9UQ80 394 aaKnown RBP10.85□□□□□ -0.67
EXOSC1-211ENST00000489158 UQCRHLA0A096LP55 91 aa10.85□□□□□ -0.67
EXOSC1-211ENST00000489158 PHF14O94880 888 aa10.85□□□□□ -0.67
EXOSC1-211ENST00000489158 UQCRHP07919 91 aa10.85□□□□□ -0.67
EXOSC1-211ENST00000489158 FOXO4P98177 505 aa10.85□□□□□ -0.67
EXOSC1-211ENST00000489158 LMBR1LQ6UX01 489 aa10.85□□□□□ -0.67
EXOSC1-211ENST00000489158 SMIM5Q71RC9 77 aa10.85□□□□□ -0.67
EXOSC1-211ENST00000489158 OTUD7AQ8TE49 926 aaPredicted RBP10.85□□□□□ -0.67
EXOSC1-211ENST00000489158 COPRSQ9NQ92 184 aa10.85□□□□□ -0.67
EXOSC1-211ENST00000489158 NIP7Q9Y221 180 aaKnown RBP eCLIP10.85□□□□□ -0.67
EXOSC1-211ENST00000489158 ZKSCAN5Q9Y2L8 839 aa10.85□□□□□ -0.67
EXOSC1-211ENST00000489158 DDX60Q8IY21 1712 aaKnown RBP10.84□□□□□ -0.67
EXOSC1-211ENST00000489158 SH3TC1Q8TE82 1336 aa10.84□□□□□ -0.67
EXOSC1-211ENST00000489158 USP42Q9H9J4 1324 aaKnown RBP10.84□□□□□ -0.67
EXOSC1-211ENST00000489158 ST18O60284 1047 aa10.84□□□□□ -0.67
EXOSC1-211ENST00000489158 LRSAM1Q6UWE0 723 aa10.84□□□□□ -0.67
EXOSC1-211ENST00000489158 UTP14AQ9BVJ6 771 aaKnown RBP10.84□□□□□ -0.67
EXOSC1-211ENST00000489158 SIL1Q9H173 461 aa10.84□□□□□ -0.67
EXOSC1-211ENST00000489158 IL1RAPL2Q9NP60 686 aa10.84□□□□□ -0.67
EXOSC1-211ENST00000489158 TMEM63CQ9P1W3 806 aa10.84□□□□□ -0.67
EXOSC1-211ENST00000489158 QSER1Q2KHR3 1735 aa10.84□□□□□ -0.67
EXOSC1-211ENST00000489158 SYCE3A1L190 88 aa10.84□□□□□ -0.67
EXOSC1-211ENST00000489158 SDSP20132 328 aa10.84□□□□□ -0.67
EXOSC1-211ENST00000489158 RFC4P35249 363 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms