RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 WDR63Q8IWG1 891 aa18.02■□□□□ 0.48
VTI1A-206ENST00000489142 PI4KAP1Q8N8J0 262 aa18.02■□□□□ 0.48
VTI1A-206ENST00000489142 ZBTB38Q8NAP3 1195 aaPredicted RBP18.02■□□□□ 0.48
VTI1A-206ENST00000489142 CELF1Q92879 486 aaKnown RBP18.02■□□□□ 0.48
VTI1A-206ENST00000489142 TMX4Q9H1E5 349 aaPredicted RBP18.02■□□□□ 0.48
VTI1A-206ENST00000489142 DUOX1Q9NRD9 1551 aa18.01■□□□□ 0.47
VTI1A-206ENST00000489142 BBOX1O75936 387 aa18.01■□□□□ 0.47
VTI1A-206ENST00000489142 NCBP3Q53F19 620 aaKnown RBP18.01■□□□□ 0.47
VTI1A-206ENST00000489142 DPP8Q6V1X1 898 aaPredicted RBP18.01■□□□□ 0.47
VTI1A-206ENST00000489142 SP8Q8IXZ3 490 aa18.01■□□□□ 0.47
VTI1A-206ENST00000489142 CCDC85AQ96PX6 553 aaPredicted RBP18.01■□□□□ 0.47
VTI1A-206ENST00000489142 CWC25Q9NXE8 425 aaPredicted RBP18.01■□□□□ 0.47
VTI1A-206ENST00000489142 GJA3Q9Y6H8 435 aa18.01■□□□□ 0.47
VTI1A-206ENST00000489142 LTBP1Q14766 1721 aa18.01■□□□□ 0.47
VTI1A-206ENST00000489142 SPEF2Q9C093 1822 aa18■□□□□ 0.47
VTI1A-206ENST00000489142 SF3B3Q15393 1217 aaKnown RBP18■□□□□ 0.47
VTI1A-206ENST00000489142 GRIPAP1Q4V328 841 aa18■□□□□ 0.47
VTI1A-206ENST00000489142 KSR2Q6VAB6 950 aa18■□□□□ 0.47
VTI1A-206ENST00000489142 MPNDQ8N594 471 aa18■□□□□ 0.47
VTI1A-206ENST00000489142 CCDC191Q8NCU4 936 aa18■□□□□ 0.47
VTI1A-206ENST00000489142 L3MBTL3Q96JM7 780 aaPredicted RBP18■□□□□ 0.47
VTI1A-206ENST00000489142 CHMP4AQ9BY43 222 aa18■□□□□ 0.47
VTI1A-206ENST00000489142 CACNA1FO60840 1977 aa18■□□□□ 0.47
VTI1A-206ENST00000489142 IGKV5-2P06315 115 aa17.99■□□□□ 0.47
VTI1A-206ENST00000489142 EIF6P56537 245 aaKnown RBP17.99■□□□□ 0.47
VTI1A-206ENST00000489142 CWF19L2Q2TBE0 894 aaKnown RBP17.99■□□□□ 0.47
VTI1A-206ENST00000489142 NIM1KQ8IY84 436 aa17.99■□□□□ 0.47
VTI1A-206ENST00000489142 TAF1DQ9H5J8 278 aaPredicted RBP17.99■□□□□ 0.47
VTI1A-206ENST00000489142 SEC31BQ9NQW1 1179 aa17.99■□□□□ 0.47
VTI1A-206ENST00000489142 MYH3P11055 1940 aa17.99■□□□□ 0.47
VTI1A-206ENST00000489142 IQCA1LA6NCM1 817 aa17.98■□□□□ 0.47
VTI1A-206ENST00000489142 VAMP4O75379 141 aa17.98■□□□□ 0.47
VTI1A-206ENST00000489142 PCCAP05165 728 aaPredicted RBP17.98■□□□□ 0.47
VTI1A-206ENST00000489142 EAPPQ56P03 285 aaPredicted RBP17.98■□□□□ 0.47
VTI1A-206ENST00000489142 FLIIQ13045 1269 aa17.97■□□□□ 0.47
VTI1A-206ENST00000489142 GPC2Q8N158 579 aa17.97■□□□□ 0.47
VTI1A-206ENST00000489142 RTFDC1Q9BY42 306 aaPredicted RBP17.97■□□□□ 0.47
VTI1A-206ENST00000489142 HACL1Q9UJ83 578 aa17.97■□□□□ 0.47
VTI1A-206ENST00000489142 FKBP5Q13451 457 aaPredicted RBP17.96■□□□□ 0.47
VTI1A-206ENST00000489142 CHADLQ6NUI6 762 aa17.96■□□□□ 0.47
VTI1A-206ENST00000489142 DNAJC5GQ8N7S2 189 aa17.96■□□□□ 0.47
VTI1A-206ENST00000489142 SUPT20HQ8NEM7 779 aa17.96■□□□□ 0.47
VTI1A-206ENST00000489142 ADAMTSL1Q8N6G6 1762 aa17.96■□□□□ 0.47
VTI1A-206ENST00000489142 NEURL1BA8MQ27 555 aa17.95■□□□□ 0.46
VTI1A-206ENST00000489142 PDE8AO60658 829 aa17.95■□□□□ 0.46
VTI1A-206ENST00000489142 EPHX2P34913 555 aa17.95■□□□□ 0.46
VTI1A-206ENST00000489142 GPSM2P81274 684 aa17.95■□□□□ 0.46
VTI1A-206ENST00000489142 NEXNQ0ZGT2 675 aa17.95■□□□□ 0.46
VTI1A-206ENST00000489142 GPR101Q96P66 508 aaPredicted RBP17.95■□□□□ 0.46
VTI1A-206ENST00000489142 NSFL1CQ9UNZ2 370 aaKnown RBP17.95■□□□□ 0.46
VTI1A-206ENST00000489142 TMC4Q7Z404 712 aa17.94■□□□□ 0.46
VTI1A-206ENST00000489142 MYH16Q9H6N6 1097 aa17.94■□□□□ 0.46
VTI1A-206ENST00000489142 CLEC11AQ9Y240 323 aa17.94■□□□□ 0.46
VTI1A-206ENST00000489142 RIMBP2O15034 1052 aa17.93■□□□□ 0.46
VTI1A-206ENST00000489142 SCNN1DP51172 638 aa17.93■□□□□ 0.46
VTI1A-206ENST00000489142 RPS8P62241 208 aaKnown RBP17.93■□□□□ 0.46
VTI1A-206ENST00000489142 KIAA2012Q0VF49 1180 aa17.93■□□□□ 0.46
VTI1A-206ENST00000489142 CCDC152Q4G0S7 254 aa17.93■□□□□ 0.46
VTI1A-206ENST00000489142 UBE3BQ7Z3V4 1068 aa17.93■□□□□ 0.46
VTI1A-206ENST00000489142 LDHDQ86WU2 507 aa17.93■□□□□ 0.46
VTI1A-206ENST00000489142 POLLQ9UGP5 575 aa17.93■□□□□ 0.46
VTI1A-206ENST00000489142 ZNF521Q96K83 1311 aa17.93■□□□□ 0.46
VTI1A-206ENST00000489142 CDHR2Q9BYE9 1310 aa17.93■□□□□ 0.46
VTI1A-206ENST00000489142 F6X3S4 739 aa17.92■□□□□ 0.46
VTI1A-206ENST00000489142 C6orf229H3BNL8 230 aa17.92■□□□□ 0.46
VTI1A-206ENST00000489142 RAD17O75943 681 aa17.92■□□□□ 0.46
VTI1A-206ENST00000489142 EPS15P42566 896 aa17.92■□□□□ 0.46
VTI1A-206ENST00000489142 CTSWP56202 376 aa17.92■□□□□ 0.46
VTI1A-206ENST00000489142 CXCL9Q07325 125 aa17.92■□□□□ 0.46
VTI1A-206ENST00000489142 DNAAF4Q8WXU2 420 aa17.92■□□□□ 0.46
VTI1A-206ENST00000489142 ZNRF3Q9ULT6 936 aa17.92■□□□□ 0.46
VTI1A-206ENST00000489142 YDJCA8MPS7 323 aa17.91■□□□□ 0.46
VTI1A-206ENST00000489142 HSP90B1P14625 803 aaKnown RBP17.91■□□□□ 0.46
VTI1A-206ENST00000489142 LMOD1P29536 600 aaPredicted RBP17.91■□□□□ 0.46
VTI1A-206ENST00000489142 VPS33BQ9H267 617 aa17.91■□□□□ 0.46
VTI1A-206ENST00000489142 DBNDD1Q9H9R9 158 aa17.91■□□□□ 0.46
VTI1A-206ENST00000489142 GCKRQ14397 625 aa17.9■□□□□ 0.46
VTI1A-206ENST00000489142 WASHC4Q2M389 1173 aa17.9■□□□□ 0.46
VTI1A-206ENST00000489142 MAP1SQ66K74 1059 aaPredicted RBP17.9■□□□□ 0.46
VTI1A-206ENST00000489142 KLRG1Q96E93 195 aa17.9■□□□□ 0.46
VTI1A-206ENST00000489142 GREM2Q9H772 168 aa17.9■□□□□ 0.46
VTI1A-206ENST00000489142 H7C1W4 665 aa17.89■□□□□ 0.45
VTI1A-206ENST00000489142 GMPSP49915 693 aaPredicted RBP17.89■□□□□ 0.45
VTI1A-206ENST00000489142 DOK7Q18PE1 504 aa17.89■□□□□ 0.45
VTI1A-206ENST00000489142 ANKRD18AQ8IVF6 992 aa17.89■□□□□ 0.45
VTI1A-206ENST00000489142 TTLL11Q8NHH1 800 aa17.89■□□□□ 0.45
VTI1A-206ENST00000489142 TBC1D16Q8TBP0 767 aa17.89■□□□□ 0.45
VTI1A-206ENST00000489142 ANKIB1Q9P2G1 1089 aa17.89■□□□□ 0.45
VTI1A-206ENST00000489142 SCN9AQ15858 1988 aa17.88■□□□□ 0.45
VTI1A-206ENST00000489142 UFL1O94874 794 aa17.88■□□□□ 0.45
VTI1A-206ENST00000489142 CIAPIN1Q6FI81 312 aa17.88■□□□□ 0.45
VTI1A-206ENST00000489142 PNMA8AQ86V59 439 aaPredicted RBP17.88■□□□□ 0.45
VTI1A-206ENST00000489142 SHTN1A0MZ66 631 aa17.87■□□□□ 0.45
VTI1A-206ENST00000489142 LINS1Q8NG48 757 aa17.87■□□□□ 0.45
VTI1A-206ENST00000489142 KCNQ5Q9NR82 932 aa17.87■□□□□ 0.45
VTI1A-206ENST00000489142 GPRC5DQ9NZD1 345 aa17.87■□□□□ 0.45
VTI1A-206ENST00000489142 PASKQ96RG2 1323 aa17.87■□□□□ 0.45
VTI1A-206ENST00000489142 WTIPA6NIX2 430 aaPredicted RBP17.86■□□□□ 0.45
VTI1A-206ENST00000489142 ECE2O60344 883 aa17.86■□□□□ 0.45
VTI1A-206ENST00000489142 ITGBL1O95965 494 aaPredicted RBP17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 148.6 ms