RNA–Protein interactions for RNA: ENST00000489130.2

SRRM1-216, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-216ENST00000489130 WDR63Q8IWG1 891 aa16.17■□□□□ 0.18
SRRM1-216ENST00000489130 CCDC191Q8NCU4 936 aa16.17■□□□□ 0.18
SRRM1-216ENST00000489130 METTL22Q9BUU2 404 aaPredicted RBP16.17■□□□□ 0.18
SRRM1-216ENST00000489130 FANCIQ9NVI1 1328 aa16.17■□□□□ 0.18
SRRM1-216ENST00000489130 LRRC37AA6NMS7 1700 aa16.16■□□□□ 0.18
SRRM1-216ENST00000489130 IRS4O14654 1257 aaPredicted RBP16.16■□□□□ 0.18
SRRM1-216ENST00000489130 PPIP5K2O43314 1243 aa16.16■□□□□ 0.18
SRRM1-216ENST00000489130 EIF6P56537 245 aaKnown RBP16.16■□□□□ 0.18
SRRM1-216ENST00000489130 RTL5Q5HYW3 569 aaPredicted RBP16.16■□□□□ 0.18
SRRM1-216ENST00000489130 DPP8Q6V1X1 898 aaPredicted RBP16.16■□□□□ 0.18
SRRM1-216ENST00000489130 SUPT20HQ8NEM7 779 aa16.16■□□□□ 0.18
SRRM1-216ENST00000489130 STK31Q9BXU1 1019 aa16.16■□□□□ 0.18
SRRM1-216ENST00000489130 HACL1Q9UJ83 578 aa16.16■□□□□ 0.18
SRRM1-216ENST00000489130 HSP90B1P14625 803 aaKnown RBP16.15■□□□□ 0.18
SRRM1-216ENST00000489130 AOC3Q16853 763 aa16.15■□□□□ 0.18
SRRM1-216ENST00000489130 KSR2Q6VAB6 950 aa16.15■□□□□ 0.18
SRRM1-216ENST00000489130 LDHDQ86WU2 507 aa16.15■□□□□ 0.18
SRRM1-216ENST00000489130 NIM1KQ8IY84 436 aa16.15■□□□□ 0.18
SRRM1-216ENST00000489130 CWC25Q9NXE8 425 aaPredicted RBP16.15■□□□□ 0.18
SRRM1-216ENST00000489130 MAP3K2Q9Y2U5 619 aa16.15■□□□□ 0.18
SRRM1-216ENST00000489130 DUOX1Q9NRD9 1551 aa16.14■□□□□ 0.17
SRRM1-216ENST00000489130 PCCAP05165 728 aaPredicted RBP16.14■□□□□ 0.17
SRRM1-216ENST00000489130 EPHX2P34913 555 aa16.14■□□□□ 0.17
SRRM1-216ENST00000489130 MPNDQ8N594 471 aa16.14■□□□□ 0.17
SRRM1-216ENST00000489130 CELF1Q92879 486 aaKnown RBP16.14■□□□□ 0.17
SRRM1-216ENST00000489130 KLRG1Q96E93 195 aa16.14■□□□□ 0.17
SRRM1-216ENST00000489130 COL4A1P02462 1669 aa16.14■□□□□ 0.17
SRRM1-216ENST00000489130 ADAMTSL1Q8N6G6 1762 aa16.13■□□□□ 0.17
SRRM1-216ENST00000489130 PI4KAP2A4QPH2 592 aa16.13■□□□□ 0.17
SRRM1-216ENST00000489130 KIAA2012Q0VF49 1180 aa16.13■□□□□ 0.17
SRRM1-216ENST00000489130 PNMA8AQ86V59 439 aaPredicted RBP16.13■□□□□ 0.17
SRRM1-216ENST00000489130 PI4KAP1Q8N8J0 262 aa16.13■□□□□ 0.17
SRRM1-216ENST00000489130 SALL2Q9Y467 1007 aaPredicted RBP16.13■□□□□ 0.17
SRRM1-216ENST00000489130 TAF1P21675 1872 aa16.12■□□□□ 0.17
SRRM1-216ENST00000489130 SLC4A2P04920 1241 aa16.12■□□□□ 0.17
SRRM1-216ENST00000489130 IGKV5-2P06315 115 aa16.12■□□□□ 0.17
SRRM1-216ENST00000489130 SCNN1DP51172 638 aa16.12■□□□□ 0.17
SRRM1-216ENST00000489130 FAM9BQ8IZU0 186 aa16.12■□□□□ 0.17
SRRM1-216ENST00000489130 ZNRF3Q9ULT6 936 aa16.12■□□□□ 0.17
SRRM1-216ENST00000489130 GJA3Q9Y6H8 435 aa16.12■□□□□ 0.17
SRRM1-216ENST00000489130 LTBP1Q14766 1721 aa16.11■□□□□ 0.17
SRRM1-216ENST00000489130 PDE8AO60658 829 aa16.11■□□□□ 0.17
SRRM1-216ENST00000489130 EAPPQ56P03 285 aaPredicted RBP16.11■□□□□ 0.17
SRRM1-216ENST00000489130 G2E3Q7L622 706 aa16.11■□□□□ 0.17
SRRM1-216ENST00000489130 CDHR2Q9BYE9 1310 aa16.11■□□□□ 0.17
SRRM1-216ENST00000489130 VAMP4O75379 141 aa16.1■□□□□ 0.17
SRRM1-216ENST00000489130 LMOD1P29536 600 aaPredicted RBP16.1■□□□□ 0.17
SRRM1-216ENST00000489130 RPS8P62241 208 aaKnown RBP16.1■□□□□ 0.17
SRRM1-216ENST00000489130 NEXNQ0ZGT2 675 aa16.1■□□□□ 0.17
SRRM1-216ENST00000489130 CCDC152Q4G0S7 254 aa16.1■□□□□ 0.17
SRRM1-216ENST00000489130 JMYQ8N9B5 988 aa16.1■□□□□ 0.17
SRRM1-216ENST00000489130 SPINK5Q9NQ38 1064 aaPredicted RBP16.1■□□□□ 0.17
SRRM1-216ENST00000489130 PASKQ96RG2 1323 aa16.1■□□□□ 0.17
SRRM1-216ENST00000489130 EXOSC9Q06265 439 aaKnown RBP16.09■□□□□ 0.17
SRRM1-216ENST00000489130 CXCL9Q07325 125 aa16.09■□□□□ 0.17
SRRM1-216ENST00000489130 FLIIQ13045 1269 aa16.09■□□□□ 0.17
SRRM1-216ENST00000489130 JARID2Q92833 1246 aaPredicted RBP16.09■□□□□ 0.17
SRRM1-216ENST00000489130 SEC31BQ9NQW1 1179 aa16.09■□□□□ 0.17
SRRM1-216ENST00000489130 CREBZFQ9NS37 354 aa16.09■□□□□ 0.17
SRRM1-216ENST00000489130 NSFL1CQ9UNZ2 370 aaKnown RBP16.09■□□□□ 0.17
SRRM1-216ENST00000489130 NEURL1BA8MQ27 555 aa16.08■□□□□ 0.16
SRRM1-216ENST00000489130 ITGBL1O95965 494 aaPredicted RBP16.08■□□□□ 0.16
SRRM1-216ENST00000489130 GPSM2P81274 684 aa16.08■□□□□ 0.16
SRRM1-216ENST00000489130 CWF19L2Q2TBE0 894 aaKnown RBP16.08■□□□□ 0.16
SRRM1-216ENST00000489130 MYH16Q9H6N6 1097 aa16.08■□□□□ 0.16
SRRM1-216ENST00000489130 EPS15P42566 896 aa16.07■□□□□ 0.16
SRRM1-216ENST00000489130 CTSWP56202 376 aa16.07■□□□□ 0.16
SRRM1-216ENST00000489130 PODXL2Q9NZ53 605 aa16.07■□□□□ 0.16
SRRM1-216ENST00000489130 GPRC5DQ9NZD1 345 aa16.07■□□□□ 0.16
SRRM1-216ENST00000489130 POLLQ9UGP5 575 aa16.07■□□□□ 0.16
SRRM1-216ENST00000489130 CLEC11AQ9Y240 323 aa16.07■□□□□ 0.16
SRRM1-216ENST00000489130 ZNF521Q96K83 1311 aa16.07■□□□□ 0.16
SRRM1-216ENST00000489130 YDJCA8MPS7 323 aa16.06■□□□□ 0.16
SRRM1-216ENST00000489130 FKBP5Q13451 457 aaPredicted RBP16.06■□□□□ 0.16
SRRM1-216ENST00000489130 WASHC4Q2M389 1173 aa16.06■□□□□ 0.16
SRRM1-216ENST00000489130 CIAPIN1Q6FI81 312 aa16.06■□□□□ 0.16
SRRM1-216ENST00000489130 USP50Q70EL3 339 aaPredicted RBP16.06■□□□□ 0.16
SRRM1-216ENST00000489130 DNAAF4Q8WXU2 420 aa16.06■□□□□ 0.16
SRRM1-216ENST00000489130 RTL9Q8NET4 1388 aa16.05■□□□□ 0.16
SRRM1-216ENST00000489130 C6orf229H3BNL8 230 aa16.05■□□□□ 0.16
SRRM1-216ENST00000489130 TNIP1Q15025 636 aa16.05■□□□□ 0.16
SRRM1-216ENST00000489130 MAP1SQ66K74 1059 aaPredicted RBP16.05■□□□□ 0.16
SRRM1-216ENST00000489130 CNTROBQ8N137 903 aa16.05■□□□□ 0.16
SRRM1-216ENST00000489130 TBC1D16Q8TBP0 767 aa16.05■□□□□ 0.16
SRRM1-216ENST00000489130 CCDC85AQ96PX6 553 aaPredicted RBP16.05■□□□□ 0.16
SRRM1-216ENST00000489130 EYA3Q99504 573 aa16.05■□□□□ 0.16
SRRM1-216ENST00000489130 H7C1W4 665 aa16.04■□□□□ 0.16
SRRM1-216ENST00000489130 RAD17O75943 681 aa16.04■□□□□ 0.16
SRRM1-216ENST00000489130 GMPSP49915 693 aaPredicted RBP16.04■□□□□ 0.16
SRRM1-216ENST00000489130 GCKRQ14397 625 aa16.04■□□□□ 0.16
SRRM1-216ENST00000489130 LINS1Q8NG48 757 aa16.04■□□□□ 0.16
SRRM1-216ENST00000489130 TTLL11Q8NHH1 800 aa16.04■□□□□ 0.16
SRRM1-216ENST00000489130 ADARB2Q9NS39 739 aaKnown RBP16.04■□□□□ 0.16
SRRM1-216ENST00000489130 CACNA1FO60840 1977 aa16.04■□□□□ 0.16
SRRM1-216ENST00000489130 UBE3BQ7Z3V4 1068 aa16.03■□□□□ 0.16
SRRM1-216ENST00000489130 ANKRD18AQ8IVF6 992 aa16.03■□□□□ 0.16
SRRM1-216ENST00000489130 CDC5LQ99459 802 aaKnown RBP16.03■□□□□ 0.16
SRRM1-216ENST00000489130 PLA2G12BQ9BX93 195 aa16.03■□□□□ 0.16
SRRM1-216ENST00000489130 GREM2Q9H772 168 aa16.03■□□□□ 0.16
SRRM1-216ENST00000489130 DBNDD1Q9H9R9 158 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms