RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 EIF6P56537 245 aaKnown RBP17.73■□□□□ 0.43
SPTLC1-207ENST00000488921 SF3B3Q15393 1217 aaKnown RBP17.73■□□□□ 0.43
SPTLC1-207ENST00000488921 METTL22Q9BUU2 404 aaPredicted RBP17.73■□□□□ 0.43
SPTLC1-207ENST00000488921 CWC25Q9NXE8 425 aaPredicted RBP17.73■□□□□ 0.43
SPTLC1-207ENST00000488921 SALL2Q9Y467 1007 aaPredicted RBP17.73■□□□□ 0.43
SPTLC1-207ENST00000488921 COL4A5P29400 1685 aa17.73■□□□□ 0.43
SPTLC1-207ENST00000488921 NEXNQ0ZGT2 675 aa17.72■□□□□ 0.43
SPTLC1-207ENST00000488921 DPP8Q6V1X1 898 aaPredicted RBP17.72■□□□□ 0.43
SPTLC1-207ENST00000488921 NIM1KQ8IY84 436 aa17.72■□□□□ 0.43
SPTLC1-207ENST00000488921 GPC2Q8N158 579 aa17.72■□□□□ 0.43
SPTLC1-207ENST00000488921 ZNF428Q96B54 188 aa17.72■□□□□ 0.43
SPTLC1-207ENST00000488921 MAP3K2Q9Y2U5 619 aa17.72■□□□□ 0.43
SPTLC1-207ENST00000488921 PPIP5K2O43314 1243 aa17.71■□□□□ 0.43
SPTLC1-207ENST00000488921 PCCAP05165 728 aaPredicted RBP17.71■□□□□ 0.43
SPTLC1-207ENST00000488921 RTL5Q5HYW3 569 aaPredicted RBP17.71■□□□□ 0.43
SPTLC1-207ENST00000488921 KSR2Q6VAB6 950 aa17.71■□□□□ 0.43
SPTLC1-207ENST00000488921 MPNDQ8N594 471 aa17.71■□□□□ 0.43
SPTLC1-207ENST00000488921 RTFDC1Q9BY42 306 aaPredicted RBP17.71■□□□□ 0.43
SPTLC1-207ENST00000488921 HACL1Q9UJ83 578 aa17.71■□□□□ 0.43
SPTLC1-207ENST00000488921 MYH16Q9H6N6 1097 aa17.7■□□□□ 0.42
SPTLC1-207ENST00000488921 ADAMTSL1Q8N6G6 1762 aa17.7■□□□□ 0.42
SPTLC1-207ENST00000488921 DUOX1Q9NRD9 1551 aa17.7■□□□□ 0.42
SPTLC1-207ENST00000488921 LTBP1Q14766 1721 aa17.69■□□□□ 0.42
SPTLC1-207ENST00000488921 PI4KAP2A4QPH2 592 aa17.69■□□□□ 0.42
SPTLC1-207ENST00000488921 SLC4A2P04920 1241 aa17.69■□□□□ 0.42
SPTLC1-207ENST00000488921 CHADLQ6NUI6 762 aa17.69■□□□□ 0.42
SPTLC1-207ENST00000488921 SLC51AQ86UW1 340 aa17.69■□□□□ 0.42
SPTLC1-207ENST00000488921 PI4KAP1Q8N8J0 262 aa17.69■□□□□ 0.42
SPTLC1-207ENST00000488921 TAF1DQ9H5J8 278 aaPredicted RBP17.69■□□□□ 0.42
SPTLC1-207ENST00000488921 PDE8AO60658 829 aa17.68■□□□□ 0.42
SPTLC1-207ENST00000488921 AOC3Q16853 763 aa17.68■□□□□ 0.42
SPTLC1-207ENST00000488921 CCDC152Q4G0S7 254 aa17.68■□□□□ 0.42
SPTLC1-207ENST00000488921 LDHDQ86WU2 507 aa17.68■□□□□ 0.42
SPTLC1-207ENST00000488921 CDHR2Q9BYE9 1310 aa17.68■□□□□ 0.42
SPTLC1-207ENST00000488921 LMOD1P29536 600 aaPredicted RBP17.67■□□□□ 0.42
SPTLC1-207ENST00000488921 EXOSC9Q06265 439 aaKnown RBP17.67■□□□□ 0.42
SPTLC1-207ENST00000488921 KIAA2012Q0VF49 1180 aa17.67■□□□□ 0.42
SPTLC1-207ENST00000488921 FLIIQ13045 1269 aa17.67■□□□□ 0.42
SPTLC1-207ENST00000488921 PNMA8AQ86V59 439 aaPredicted RBP17.67■□□□□ 0.42
SPTLC1-207ENST00000488921 CELF1Q92879 486 aaKnown RBP17.67■□□□□ 0.42
SPTLC1-207ENST00000488921 GJA3Q9Y6H8 435 aa17.67■□□□□ 0.42
SPTLC1-207ENST00000488921 SPEF2Q9C093 1822 aa17.67■□□□□ 0.42
SPTLC1-207ENST00000488921 EPHX2P34913 555 aa17.66■□□□□ 0.42
SPTLC1-207ENST00000488921 COL4A1P02462 1669 aa17.66■□□□□ 0.42
SPTLC1-207ENST00000488921 VAMP4O75379 141 aa17.65■□□□□ 0.42
SPTLC1-207ENST00000488921 IGKV5-2P06315 115 aa17.65■□□□□ 0.42
SPTLC1-207ENST00000488921 RPS8P62241 208 aaKnown RBP17.65■□□□□ 0.42
SPTLC1-207ENST00000488921 FKBP5Q13451 457 aaPredicted RBP17.65■□□□□ 0.42
SPTLC1-207ENST00000488921 EAPPQ56P03 285 aaPredicted RBP17.65■□□□□ 0.42
SPTLC1-207ENST00000488921 G2E3Q7L622 706 aa17.65■□□□□ 0.42
SPTLC1-207ENST00000488921 ZNRF3Q9ULT6 936 aa17.65■□□□□ 0.42
SPTLC1-207ENST00000488921 POTEIP0CG38 1075 aa17.64■□□□□ 0.41
SPTLC1-207ENST00000488921 POTEJP0CG39 1038 aa17.64■□□□□ 0.41
SPTLC1-207ENST00000488921 DNAJC5GQ8N7S2 189 aa17.64■□□□□ 0.41
SPTLC1-207ENST00000488921 NSFL1CQ9UNZ2 370 aaKnown RBP17.64■□□□□ 0.41
SPTLC1-207ENST00000488921 NEURL1BA8MQ27 555 aa17.63■□□□□ 0.41
SPTLC1-207ENST00000488921 CTSWP56202 376 aa17.63■□□□□ 0.41
SPTLC1-207ENST00000488921 CWF19L2Q2TBE0 894 aaKnown RBP17.63■□□□□ 0.41
SPTLC1-207ENST00000488921 KLRG1Q96E93 195 aa17.63■□□□□ 0.41
SPTLC1-207ENST00000488921 EYA3Q99504 573 aa17.63■□□□□ 0.41
SPTLC1-207ENST00000488921 CLEC11AQ9Y240 323 aa17.63■□□□□ 0.41
SPTLC1-207ENST00000488921 SCNN1DP51172 638 aa17.62■□□□□ 0.41
SPTLC1-207ENST00000488921 HTRA3P83110 453 aa17.62■□□□□ 0.41
SPTLC1-207ENST00000488921 DNAAF4Q8WXU2 420 aa17.62■□□□□ 0.41
SPTLC1-207ENST00000488921 SPINK5Q9NQ38 1064 aaPredicted RBP17.62■□□□□ 0.41
SPTLC1-207ENST00000488921 C6orf229H3BNL8 230 aa17.61■□□□□ 0.41
SPTLC1-207ENST00000488921 TNIP1Q15025 636 aa17.61■□□□□ 0.41
SPTLC1-207ENST00000488921 WASHC4Q2M389 1173 aa17.61■□□□□ 0.41
SPTLC1-207ENST00000488921 CIAPIN1Q6FI81 312 aa17.61■□□□□ 0.41
SPTLC1-207ENST00000488921 ANKRD18AQ8IVF6 992 aa17.61■□□□□ 0.41
SPTLC1-207ENST00000488921 JARID2Q92833 1246 aaPredicted RBP17.61■□□□□ 0.41
SPTLC1-207ENST00000488921 CDC5LQ99459 802 aaKnown RBP17.61■□□□□ 0.41
SPTLC1-207ENST00000488921 SEC31BQ9NQW1 1179 aa17.61■□□□□ 0.41
SPTLC1-207ENST00000488921 ZNF521Q96K83 1311 aa17.61■□□□□ 0.41
SPTLC1-207ENST00000488921 RTL9Q8NET4 1388 aa17.61■□□□□ 0.41
SPTLC1-207ENST00000488921 GPSM2P81274 684 aa17.6■□□□□ 0.41
SPTLC1-207ENST00000488921 CXCL9Q07325 125 aa17.6■□□□□ 0.41
SPTLC1-207ENST00000488921 USP50Q70EL3 339 aaPredicted RBP17.6■□□□□ 0.41
SPTLC1-207ENST00000488921 UBE3BQ7Z3V4 1068 aa17.6■□□□□ 0.41
SPTLC1-207ENST00000488921 LINS1Q8NG48 757 aa17.6■□□□□ 0.41
SPTLC1-207ENST00000488921 PODXL2Q9NZ53 605 aa17.6■□□□□ 0.41
SPTLC1-207ENST00000488921 PSME4Q14997 1843 aa17.6■□□□□ 0.41
SPTLC1-207ENST00000488921 GCKRQ14397 625 aa17.59■□□□□ 0.41
SPTLC1-207ENST00000488921 CCDC85AQ96PX6 553 aaPredicted RBP17.59■□□□□ 0.41
SPTLC1-207ENST00000488921 CREBZFQ9NS37 354 aa17.59■□□□□ 0.41
SPTLC1-207ENST00000488921 ANKIB1Q9P2G1 1089 aa17.59■□□□□ 0.41
SPTLC1-207ENST00000488921 TRPM7Q96QT4 1865 aa17.58■□□□□ 0.41
SPTLC1-207ENST00000488921 PASKQ96RG2 1323 aa17.58■□□□□ 0.4
SPTLC1-207ENST00000488921 H7C1W4 665 aa17.58■□□□□ 0.4
SPTLC1-207ENST00000488921 TTLL11Q8NHH1 800 aa17.58■□□□□ 0.4
SPTLC1-207ENST00000488921 TBC1D16Q8TBP0 767 aa17.58■□□□□ 0.4
SPTLC1-207ENST00000488921 BCL2L13Q9BXK5 485 aa17.58■□□□□ 0.4
SPTLC1-207ENST00000488921 ADARB2Q9NS39 739 aaKnown RBP17.58■□□□□ 0.4
SPTLC1-207ENST00000488921 GPRC5DQ9NZD1 345 aa17.58■□□□□ 0.4
SPTLC1-207ENST00000488921 POLLQ9UGP5 575 aa17.58■□□□□ 0.4
SPTLC1-207ENST00000488921 GGA1Q9UJY5 639 aa17.58■□□□□ 0.4
SPTLC1-207ENST00000488921 XDHP47989 1333 aa17.57■□□□□ 0.4
SPTLC1-207ENST00000488921 E9PSI1 815 aa17.57■□□□□ 0.4
SPTLC1-207ENST00000488921 CCER2I3L3R5 266 aa17.57■□□□□ 0.4
SPTLC1-207ENST00000488921 RAD17O75943 681 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms