RNA–Protein interactions for RNA: ENST00000488857.5

VAMP2-204, Transcript of vesicle associated membrane protein 2, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene VAMP2, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-204ENST00000488857 DNAAF4Q8WXU2 420 aa28.6■■■□□ 2.17
VAMP2-204ENST00000488857 IARSP41252 1262 aaKnown RBP28.59■■■□□ 2.17
VAMP2-204ENST00000488857 SP8Q8IXZ3 490 aa28.59■■■□□ 2.17
VAMP2-204ENST00000488857 TRMT2AQ8IZ69 625 aaKnown RBP28.59■■■□□ 2.17
VAMP2-204ENST00000488857 TMX4Q9H1E5 349 aaPredicted RBP28.59■■■□□ 2.17
VAMP2-204ENST00000488857 WDR90Q96KV7 1748 aa28.58■■■□□ 2.17
VAMP2-204ENST00000488857 CWF19L2Q2TBE0 894 aaKnown RBP28.58■■■□□ 2.17
VAMP2-204ENST00000488857 DPY19L2Q6NUT2 758 aa28.58■■■□□ 2.17
VAMP2-204ENST00000488857 SLC51AQ86UW1 340 aa28.58■■■□□ 2.17
VAMP2-204ENST00000488857 PDE8AO60658 829 aa28.57■■■□□ 2.16
VAMP2-204ENST00000488857 LINS1Q8NG48 757 aa28.57■■■□□ 2.16
VAMP2-204ENST00000488857 MYH3P11055 1940 aa28.56■■■□□ 2.16
VAMP2-204ENST00000488857 CDCA7LQ96GN5 454 aa28.56■■■□□ 2.16
VAMP2-204ENST00000488857 GCKRQ14397 625 aa28.55■■■□□ 2.16
VAMP2-204ENST00000488857 RTFDC1Q9BY42 306 aaPredicted RBP28.55■■■□□ 2.16
VAMP2-204ENST00000488857 COL4A1P02462 1669 aa28.54■■■□□ 2.16
VAMP2-204ENST00000488857 H7C1W4 665 aa28.54■■■□□ 2.16
VAMP2-204ENST00000488857 TOMM70O94826 608 aa28.54■■■□□ 2.16
VAMP2-204ENST00000488857 CELF1Q92879 486 aaKnown RBP28.54■■■□□ 2.16
VAMP2-204ENST00000488857 VPS33BQ9H267 617 aa28.54■■■□□ 2.16
VAMP2-204ENST00000488857 RRAGCQ9HB90 399 aa28.54■■■□□ 2.16
VAMP2-204ENST00000488857 CCDC152Q4G0S7 254 aa28.53■■■□□ 2.16
VAMP2-204ENST00000488857 JARID2Q92833 1246 aaPredicted RBP28.53■■■□□ 2.16
VAMP2-204ENST00000488857 COL4A5P29400 1685 aa28.52■■■□□ 2.16
VAMP2-204ENST00000488857 FZD9O00144 591 aa28.52■■■□□ 2.16
VAMP2-204ENST00000488857 VEGFAP15692 232 aaPredicted RBP28.51■■■□□ 2.15
VAMP2-204ENST00000488857 SUPT20HQ8NEM7 779 aa28.51■■■□□ 2.15
VAMP2-204ENST00000488857 F6X3S4 739 aa28.5■■■□□ 2.15
VAMP2-204ENST00000488857 CTSWP56202 376 aa28.5■■■□□ 2.15
VAMP2-204ENST00000488857 RPS8P62241 208 aaKnown RBP28.5■■■□□ 2.15
VAMP2-204ENST00000488857 BEND3Q5T5X7 828 aa28.5■■■□□ 2.15
VAMP2-204ENST00000488857 DPP8Q6V1X1 898 aaPredicted RBP28.5■■■□□ 2.15
VAMP2-204ENST00000488857 MPNDQ8N594 471 aa28.5■■■□□ 2.15
VAMP2-204ENST00000488857 JDP2Q8WYK2 163 aa28.5■■■□□ 2.15
VAMP2-204ENST00000488857 DUOX1Q9NRD9 1551 aa28.5■■■□□ 2.15
VAMP2-204ENST00000488857 LTBP1Q14766 1721 aa28.49■■■□□ 2.15
VAMP2-204ENST00000488857 CASP7P55210 303 aa28.49■■■□□ 2.15
VAMP2-204ENST00000488857 UBE3BQ7Z3V4 1068 aa28.49■■■□□ 2.15
VAMP2-204ENST00000488857 MRPL50Q8N5N7 158 aaKnown RBP28.49■■■□□ 2.15
VAMP2-204ENST00000488857 RBM46Q8TBY0 533 aaKnown RBP28.49■■■□□ 2.15
VAMP2-204ENST00000488857 PLA2G12BQ9BX93 195 aa28.49■■■□□ 2.15
VAMP2-204ENST00000488857 RTL9Q8NET4 1388 aa28.49■■■□□ 2.15
VAMP2-204ENST00000488857 POTECB2RU33 542 aa28.48■■■□□ 2.15
VAMP2-204ENST00000488857 DDNO94850 711 aaPredicted RBP28.48■■■□□ 2.15
VAMP2-204ENST00000488857 CT47B1P0C2W7 299 aaPredicted RBP28.48■■■□□ 2.15
VAMP2-204ENST00000488857 L3MBTL3Q96JM7 780 aaPredicted RBP28.48■■■□□ 2.15
VAMP2-204ENST00000488857 SEC31BQ9NQW1 1179 aa28.48■■■□□ 2.15
VAMP2-204ENST00000488857 ZNF541Q9H0D2 1346 aa28.47■■■□□ 2.15
VAMP2-204ENST00000488857 C16orf71Q8IYS4 520 aaPredicted RBP28.47■■■□□ 2.15
VAMP2-204ENST00000488857 LARGE2Q8N3Y3 721 aa28.47■■■□□ 2.15
VAMP2-204ENST00000488857 TTLL11Q8NHH1 800 aa28.47■■■□□ 2.15
VAMP2-204ENST00000488857 SCN4AP35499 1836 aa28.46■■■□□ 2.15
VAMP2-204ENST00000488857 ALDH1L2Q3SY69 923 aa28.46■■■□□ 2.15
VAMP2-204ENST00000488857 SSH1Q8WYL5 1049 aa28.46■■■□□ 2.15
VAMP2-204ENST00000488857 PTPRCP08575 1304 aa28.45■■■□□ 2.15
VAMP2-204ENST00000488857 PPIP5K2O43314 1243 aa28.45■■■□□ 2.14
VAMP2-204ENST00000488857 KIAA2012Q0VF49 1180 aa28.44■■■□□ 2.14
VAMP2-204ENST00000488857 AOC3Q16853 763 aa28.44■■■□□ 2.14
VAMP2-204ENST00000488857 ALDH1L1O75891 902 aa28.43■■■□□ 2.14
VAMP2-204ENST00000488857 GPC2Q8N158 579 aa28.43■■■□□ 2.14
VAMP2-204ENST00000488857 NIM1KQ8IY84 436 aa28.42■■■□□ 2.14
VAMP2-204ENST00000488857 CCDC85AQ96PX6 553 aaPredicted RBP28.42■■■□□ 2.14
VAMP2-204ENST00000488857 CDC5LQ99459 802 aaKnown RBP28.42■■■□□ 2.14
VAMP2-204ENST00000488857 GREM2Q9H772 168 aa28.42■■■□□ 2.14
VAMP2-204ENST00000488857 NSFL1CQ9UNZ2 370 aaKnown RBP28.42■■■□□ 2.14
VAMP2-204ENST00000488857 EIF6P56537 245 aaKnown RBP28.41■■■□□ 2.14
VAMP2-204ENST00000488857 GPSM2P81274 684 aa28.41■■■□□ 2.14
VAMP2-204ENST00000488857 FSTL1Q12841 308 aa28.41■■■□□ 2.14
VAMP2-204ENST00000488857 ANKRD18AQ8IVF6 992 aa28.41■■■□□ 2.14
VAMP2-204ENST00000488857 PODXL2Q9NZ53 605 aa28.41■■■□□ 2.14
VAMP2-204ENST00000488857 CEP350Q5VT06 3117 aa28.41■■■□□ 2.14
VAMP2-204ENST00000488857 IQCA1LA6NCM1 817 aa28.4■■■□□ 2.14
VAMP2-204ENST00000488857 CSF1RP07333 972 aa28.4■■■□□ 2.14
VAMP2-204ENST00000488857 SRCIN1Q9C0H9 1055 aa28.4■■■□□ 2.14
VAMP2-204ENST00000488857 GRM8O00222 908 aa28.39■■■□□ 2.14
VAMP2-204ENST00000488857 HSPA6P17066 643 aa28.39■■■□□ 2.14
VAMP2-204ENST00000488857 SLC4A10Q6U841 1118 aa28.38■■■□□ 2.13
VAMP2-204ENST00000488857 POLLQ9UGP5 575 aa28.38■■■□□ 2.13
VAMP2-204ENST00000488857 ZNRF3Q9ULT6 936 aa28.38■■■□□ 2.13
VAMP2-204ENST00000488857 SPEF2Q9C093 1822 aa28.37■■■□□ 2.13
VAMP2-204ENST00000488857 BRPF1P55201 1214 aaPredicted RBP28.37■■■□□ 2.13
VAMP2-204ENST00000488857 SMC1BQ8NDV3 1235 aa28.37■■■□□ 2.13
VAMP2-204ENST00000488857 SMC4Q9NTJ3 1288 aa28.37■■■□□ 2.13
VAMP2-204ENST00000488857 BSDC1Q9NW68 430 aaPredicted RBP28.37■■■□□ 2.13
VAMP2-204ENST00000488857 TBC1D16Q8TBP0 767 aa28.36■■■□□ 2.13
VAMP2-204ENST00000488857 BCL2L13Q9BXK5 485 aa28.36■■■□□ 2.13
VAMP2-204ENST00000488857 FOXO4P98177 505 aa28.35■■■□□ 2.13
VAMP2-204ENST00000488857 WASHC4Q2M389 1173 aa28.35■■■□□ 2.13
VAMP2-204ENST00000488857 EYA3Q99504 573 aa28.35■■■□□ 2.13
VAMP2-204ENST00000488857 C6orf229H3BNL8 230 aa28.34■■■□□ 2.13
VAMP2-204ENST00000488857 ITGA6P23229 1130 aa28.34■■■□□ 2.13
VAMP2-204ENST00000488857 HNRNPUQ00839 825 aaKnown RBP eCLIP28.34■■■□□ 2.13
VAMP2-204ENST00000488857 FAM161AQ3B820 660 aa28.34■■■□□ 2.13
VAMP2-204ENST00000488857 TAF1DQ9H5J8 278 aaPredicted RBP28.34■■■□□ 2.13
VAMP2-204ENST00000488857 C9orf78Q9NZ63 289 aaPredicted RBP28.34■■■□□ 2.13
VAMP2-204ENST00000488857 ANKIB1Q9P2G1 1089 aa28.34■■■□□ 2.13
VAMP2-204ENST00000488857 HACL1Q9UJ83 578 aa28.34■■■□□ 2.13
VAMP2-204ENST00000488857 UTYO14607 1347 aa28.34■■■□□ 2.13
VAMP2-204ENST00000488857 XDHP47989 1333 aa28.33■■■□□ 2.13
VAMP2-204ENST00000488857 CXCL9Q07325 125 aa28.32■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms