RNA–Protein interactions for RNA: ENST00000488723.1

CDK5RAP1-214, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 3

Gene CDK5RAP1, Length 708 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-214ENST00000488723 BBOX1O75936 387 aa21.48■■□□□ 1.03
CDK5RAP1-214ENST00000488723 GNAI3P08754 354 aa21.48■■□□□ 1.03
CDK5RAP1-214ENST00000488723 NBPF7P0C2Y1 421 aaPredicted RBP21.48■■□□□ 1.03
CDK5RAP1-214ENST00000488723 CTSWP56202 376 aa21.48■■□□□ 1.03
CDK5RAP1-214ENST00000488723 TMC4Q7Z404 712 aa21.48■■□□□ 1.03
CDK5RAP1-214ENST00000488723 TTLL11Q8NHH1 800 aa21.48■■□□□ 1.03
CDK5RAP1-214ENST00000488723 COL11A2P13942 1736 aaPredicted RBP21.48■■□□□ 1.03
CDK5RAP1-214ENST00000488723 TMEM57Q8N5G2 664 aa21.47■■□□□ 1.03
CDK5RAP1-214ENST00000488723 FOXO4P98177 505 aa21.46■■□□□ 1.03
CDK5RAP1-214ENST00000488723 GPR162Q16538 588 aa21.46■■□□□ 1.03
CDK5RAP1-214ENST00000488723 GRIPAP1Q4V328 841 aa21.46■■□□□ 1.03
CDK5RAP1-214ENST00000488723 SOGA3Q5TF21 947 aa21.46■■□□□ 1.03
CDK5RAP1-214ENST00000488723 BCS1LQ9Y276 419 aa21.46■■□□□ 1.03
CDK5RAP1-214ENST00000488723 ARFGEF1Q9Y6D6 1849 aa21.45■■□□□ 1.03
CDK5RAP1-214ENST00000488723 UBTFL1P0CB47 393 aaPredicted RBP21.45■■□□□ 1.02
CDK5RAP1-214ENST00000488723 GRAPQ13588 217 aa21.45■■□□□ 1.02
CDK5RAP1-214ENST00000488723 CC2D2BQ6DHV5 1058 aa21.45■■□□□ 1.02
CDK5RAP1-214ENST00000488723 PRPF40BQ6NWY9 871 aaKnown RBP21.45■■□□□ 1.02
CDK5RAP1-214ENST00000488723 GRAPLQ8TC17 118 aaPredicted RBP21.45■■□□□ 1.02
CDK5RAP1-214ENST00000488723 CHMP4BQ9H444 224 aaKnown RBP21.45■■□□□ 1.02
CDK5RAP1-214ENST00000488723 TNNQ9UQP3 1299 aa21.45■■□□□ 1.02
CDK5RAP1-214ENST00000488723 RLBP1P12271 317 aa21.44■■□□□ 1.02
CDK5RAP1-214ENST00000488723 RABL6Q3YEC7 729 aaPredicted RBP21.44■■□□□ 1.02
CDK5RAP1-214ENST00000488723 C7orf43Q8WVR3 580 aa21.44■■□□□ 1.02
CDK5RAP1-214ENST00000488723 KAZALD1Q96I82 304 aa21.43■■□□□ 1.02
CDK5RAP1-214ENST00000488723 SUCLG2Q96I99 432 aa21.43■■□□□ 1.02
CDK5RAP1-214ENST00000488723 CDC5LQ99459 802 aaKnown RBP21.43■■□□□ 1.02
CDK5RAP1-214ENST00000488723 PLIN1O60240 522 aa21.42■■□□□ 1.02
CDK5RAP1-214ENST00000488723 YBX3P16989 372 aaKnown RBP eCLIP21.42■■□□□ 1.02
CDK5RAP1-214ENST00000488723 RPS8P62241 208 aaKnown RBP21.42■■□□□ 1.02
CDK5RAP1-214ENST00000488723 SLX4Q8IY92 1834 aa21.42■■□□□ 1.02
CDK5RAP1-214ENST00000488723 ZBTB7BO15156 539 aaPredicted RBP21.41■■□□□ 1.02
CDK5RAP1-214ENST00000488723 RRP1P56182 461 aaKnown RBP21.41■■□□□ 1.02
CDK5RAP1-214ENST00000488723 MVPQ14764 893 aaKnown RBP21.41■■□□□ 1.02
CDK5RAP1-214ENST00000488723 LMBR1LQ6UX01 489 aa21.41■■□□□ 1.02
CDK5RAP1-214ENST00000488723 ITPRIPQ8IWB1 547 aa21.41■■□□□ 1.02
CDK5RAP1-214ENST00000488723 SP8Q8IXZ3 490 aa21.41■■□□□ 1.02
CDK5RAP1-214ENST00000488723 PANK1Q8TE04 598 aa21.41■■□□□ 1.02
CDK5RAP1-214ENST00000488723 MEIS3Q99687 375 aa21.41■■□□□ 1.02
CDK5RAP1-214ENST00000488723 TMX4Q9H1E5 349 aaPredicted RBP21.41■■□□□ 1.02
CDK5RAP1-214ENST00000488723 GREM2Q9H772 168 aa21.41■■□□□ 1.02
CDK5RAP1-214ENST00000488723 DDX19BQ9UMR2 479 aa21.41■■□□□ 1.02
CDK5RAP1-214ENST00000488723 EPHA10Q5JZY3 1008 aa21.4■■□□□ 1.02
CDK5RAP1-214ENST00000488723 BICC1Q9H694 974 aaKnown RBP21.4■■□□□ 1.02
CDK5RAP1-214ENST00000488723 ATP6V0A2Q9Y487 856 aa21.4■■□□□ 1.02
CDK5RAP1-214ENST00000488723 UTRNP46939 3433 aa21.39■■□□□ 1.01
CDK5RAP1-214ENST00000488723 ANKRD18BA2A2Z9 1011 aa21.39■■□□□ 1.01
CDK5RAP1-214ENST00000488723 PPEF1O14829 653 aaPredicted RBP21.39■■□□□ 1.01
CDK5RAP1-214ENST00000488723 GNAI2P04899 355 aa21.39■■□□□ 1.01
CDK5RAP1-214ENST00000488723 ITGA6P23229 1130 aa21.39■■□□□ 1.01
CDK5RAP1-214ENST00000488723 IFIT5Q13325 482 aaKnown RBP21.39■■□□□ 1.01
CDK5RAP1-214ENST00000488723 ANKRD18AQ8IVF6 992 aa21.39■■□□□ 1.01
CDK5RAP1-214ENST00000488723 RTKN2Q8IZC4 609 aa21.39■■□□□ 1.01
CDK5RAP1-214ENST00000488723 PELP1Q8IZL8 1130 aaKnown RBP21.39■■□□□ 1.01
CDK5RAP1-214ENST00000488723 C21orf2O43822 256 aa21.38■■□□□ 1.01
CDK5RAP1-214ENST00000488723 CCDC57Q2TAC2 916 aa21.38■■□□□ 1.01
CDK5RAP1-214ENST00000488723 CCDC93Q567U6 631 aa21.38■■□□□ 1.01
CDK5RAP1-214ENST00000488723 ANKRD44Q8N8A2 993 aa21.38■■□□□ 1.01
CDK5RAP1-214ENST00000488723 CELF1Q92879 486 aaKnown RBP21.38■■□□□ 1.01
CDK5RAP1-214ENST00000488723 SEC31BQ9NQW1 1179 aa21.38■■□□□ 1.01
CDK5RAP1-214ENST00000488723 BSDC1Q9NW68 430 aaPredicted RBP21.38■■□□□ 1.01
CDK5RAP1-214ENST00000488723 MTX1Q13505 466 aa21.37■■□□□ 1.01
CDK5RAP1-214ENST00000488723 FAM161AQ3B820 660 aa21.37■■□□□ 1.01
CDK5RAP1-214ENST00000488723 LRRFIP2Q9Y608 721 aaKnown RBP21.37■■□□□ 1.01
CDK5RAP1-214ENST00000488723 IGHMBP2P38935 993 aaKnown RBP21.36■■□□□ 1.01
CDK5RAP1-214ENST00000488723 CCDC85AQ96PX6 553 aaPredicted RBP21.36■■□□□ 1.01
CDK5RAP1-214ENST00000488723 WWC3Q9ULE0 1092 aa21.36■■□□□ 1.01
CDK5RAP1-214ENST00000488723 LTBP3Q9NS15 1303 aa21.35■■□□□ 1.01
CDK5RAP1-214ENST00000488723 CACNA1SQ13698 1873 aa21.35■■□□□ 1.01
CDK5RAP1-214ENST00000488723 COG6Q9Y2V7 657 aa21.35■■□□□ 1.01
CDK5RAP1-214ENST00000488723 TAF1P21675 1872 aa21.35■■□□□ 1.01
CDK5RAP1-214ENST00000488723 C20orf194Q5TEA3 1177 aa21.34■■□□□ 1.01
CDK5RAP1-214ENST00000488723 ARHGAP27Q6ZUM4 889 aa21.34■■□□□ 1.01
CDK5RAP1-214ENST00000488723 PSMD1Q99460 953 aa21.34■■□□□ 1.01
CDK5RAP1-214ENST00000488723 MPHOSPH8Q99549 860 aa21.34■■□□□ 1.01
CDK5RAP1-214ENST00000488723 CHMP3Q9Y3E7 222 aa21.34■■□□□ 1.01
CDK5RAP1-214ENST00000488723 VPS33BQ9H267 617 aa21.33■■□□□ 1.01
CDK5RAP1-214ENST00000488723 ZBTB40Q9NUA8 1239 aa21.33■■□□□ 1.01
CDK5RAP1-214ENST00000488723 FBXO3Q9UK99 471 aa21.33■■□□□ 1.01
CDK5RAP1-214ENST00000488723 FER1L6Q2WGJ9 1857 aa21.32■■□□□ 1
CDK5RAP1-214ENST00000488723 SNED1Q8TER0 1413 aa21.32■■□□□ 1
CDK5RAP1-214ENST00000488723 RTFDC1Q9BY42 306 aaPredicted RBP21.32■■□□□ 1
CDK5RAP1-214ENST00000488723 PODXL2Q9NZ53 605 aa21.32■■□□□ 1
CDK5RAP1-214ENST00000488723 FKBP4Q02790 459 aaKnown RBP eCLIP21.31■■□□□ 1
CDK5RAP1-214ENST00000488723 AAMPQ13685 434 aa21.31■■□□□ 1
CDK5RAP1-214ENST00000488723 TAF7LQ5H9L4 462 aa21.31■■□□□ 1
CDK5RAP1-214ENST00000488723 MPNDQ8N594 471 aa21.31■■□□□ 1
CDK5RAP1-214ENST00000488723 SUPT20HQ8NEM7 779 aa21.31■■□□□ 1
CDK5RAP1-214ENST00000488723 TAOK3Q9H2K8 898 aa21.31■■□□□ 1
CDK5RAP1-214ENST00000488723 ZNF219Q9P2Y4 722 aaPredicted RBP21.31■■□□□ 1
CDK5RAP1-214ENST00000488723 LRRC37AA6NMS7 1700 aa21.3■■□□□ 1
CDK5RAP1-214ENST00000488723 LDHAL6AQ6ZMR3 332 aa21.3■■□□□ 1
CDK5RAP1-214ENST00000488723 ANKRD2Q9GZV1 360 aa21.3■■□□□ 1
CDK5RAP1-214ENST00000488723 MINPP1Q9UNW1 487 aa21.3■■□□□ 1
CDK5RAP1-214ENST00000488723 SUPT16HQ9Y5B9 1047 aaKnown RBP21.3■■□□□ 1
CDK5RAP1-214ENST00000488723 NFKBIEO00221 500 aa21.29■■□□□ 1
CDK5RAP1-214ENST00000488723 RFX5P48382 616 aaPredicted RBP21.29■■□□□ 1
CDK5RAP1-214ENST00000488723 ATP8B2P98198 1209 aa21.29■■□□□ 1
CDK5RAP1-214ENST00000488723 DPP8Q6V1X1 898 aaPredicted RBP21.29■■□□□ 1
CDK5RAP1-214ENST00000488723 OLFM4Q6UX06 510 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms