RNA–Protein interactions for RNA: ENST00000488558.2

CUL4A-209, Transcript of cullin 4A, humanhuman

TSL 3 BASIC

Gene CUL4A, Length 1,111 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-209ENST00000488558 WDR63Q8IWG1 891 aa29.74■■■□□ 2.35
CUL4A-209ENST00000488558 MYD88Q99836 296 aa29.74■■■□□ 2.35
CUL4A-209ENST00000488558 METTL22Q9BUU2 404 aaPredicted RBP29.74■■■□□ 2.35
CUL4A-209ENST00000488558 STK31Q9BXU1 1019 aa29.74■■■□□ 2.35
CUL4A-209ENST00000488558 HACL1Q9UJ83 578 aa29.74■■■□□ 2.35
CUL4A-209ENST00000488558 IRS4O14654 1257 aaPredicted RBP29.73■■■□□ 2.35
CUL4A-209ENST00000488558 CACNA1FO60840 1977 aa29.73■■■□□ 2.35
CUL4A-209ENST00000488558 DUOX1Q9NRD9 1551 aa29.73■■■□□ 2.35
CUL4A-209ENST00000488558 FANCIQ9NVI1 1328 aa29.72■■■□□ 2.35
CUL4A-209ENST00000488558 PPIP5K2O43314 1243 aa29.72■■■□□ 2.35
CUL4A-209ENST00000488558 DPP8Q6V1X1 898 aaPredicted RBP29.72■■■□□ 2.35
CUL4A-209ENST00000488558 LDHDQ86WU2 507 aa29.72■■■□□ 2.35
CUL4A-209ENST00000488558 NIM1KQ8IY84 436 aa29.72■■■□□ 2.35
CUL4A-209ENST00000488558 MPNDQ8N594 471 aa29.72■■■□□ 2.35
CUL4A-209ENST00000488558 ZNF428Q96B54 188 aa29.72■■■□□ 2.35
CUL4A-209ENST00000488558 PCCAP05165 728 aaPredicted RBP29.7■■■□□ 2.35
CUL4A-209ENST00000488558 POTEIP0CG38 1075 aa29.7■■■□□ 2.35
CUL4A-209ENST00000488558 POTEJP0CG39 1038 aa29.7■■■□□ 2.35
CUL4A-209ENST00000488558 KSR2Q6VAB6 950 aa29.7■■■□□ 2.35
CUL4A-209ENST00000488558 KLRG1Q96E93 195 aa29.7■■■□□ 2.35
CUL4A-209ENST00000488558 CWC25Q9NXE8 425 aaPredicted RBP29.7■■■□□ 2.35
CUL4A-209ENST00000488558 LTBP1Q14766 1721 aa29.69■■■□□ 2.34
CUL4A-209ENST00000488558 EPHX2P34913 555 aa29.69■■■□□ 2.34
CUL4A-209ENST00000488558 HTRA3P83110 453 aa29.69■■■□□ 2.34
CUL4A-209ENST00000488558 AOC3Q16853 763 aa29.69■■■□□ 2.34
CUL4A-209ENST00000488558 RTL5Q5HYW3 569 aaPredicted RBP29.69■■■□□ 2.34
CUL4A-209ENST00000488558 MAP3K2Q9Y2U5 619 aa29.69■■■□□ 2.34
CUL4A-209ENST00000488558 PNMA8AQ86V59 439 aaPredicted RBP29.68■■■□□ 2.34
CUL4A-209ENST00000488558 COL4A1P02462 1669 aa29.68■■■□□ 2.34
CUL4A-209ENST00000488558 KIAA2012Q0VF49 1180 aa29.67■■■□□ 2.34
CUL4A-209ENST00000488558 CELF1Q92879 486 aaKnown RBP29.67■■■□□ 2.34
CUL4A-209ENST00000488558 PI4KAP2A4QPH2 592 aa29.66■■■□□ 2.34
CUL4A-209ENST00000488558 PI4KAP1Q8N8J0 262 aa29.66■■■□□ 2.34
CUL4A-209ENST00000488558 ZNRF3Q9ULT6 936 aa29.65■■■□□ 2.34
CUL4A-209ENST00000488558 GJA3Q9Y6H8 435 aa29.65■■■□□ 2.34
CUL4A-209ENST00000488558 CDHR2Q9BYE9 1310 aa29.65■■■□□ 2.34
CUL4A-209ENST00000488558 NEXNQ0ZGT2 675 aa29.64■■■□□ 2.34
CUL4A-209ENST00000488558 JMYQ8N9B5 988 aa29.64■■■□□ 2.34
CUL4A-209ENST00000488558 MYH3P11055 1940 aa29.63■■■□□ 2.33
CUL4A-209ENST00000488558 PDE8AO60658 829 aa29.63■■■□□ 2.33
CUL4A-209ENST00000488558 SLC4A2P04920 1241 aa29.63■■■□□ 2.33
CUL4A-209ENST00000488558 LMOD1P29536 600 aaPredicted RBP29.63■■■□□ 2.33
CUL4A-209ENST00000488558 SCNN1DP51172 638 aa29.63■■■□□ 2.33
CUL4A-209ENST00000488558 EAPPQ56P03 285 aaPredicted RBP29.63■■■□□ 2.33
CUL4A-209ENST00000488558 IGKV5-2P06315 115 aa29.62■■■□□ 2.33
CUL4A-209ENST00000488558 CCDC152Q4G0S7 254 aa29.62■■■□□ 2.33
CUL4A-209ENST00000488558 FAM9BQ8IZU0 186 aa29.62■■■□□ 2.33
CUL4A-209ENST00000488558 SALL2Q9Y467 1007 aaPredicted RBP29.62■■■□□ 2.33
CUL4A-209ENST00000488558 PASKQ96RG2 1323 aa29.62■■■□□ 2.33
CUL4A-209ENST00000488558 RPS8P62241 208 aaKnown RBP29.61■■■□□ 2.33
CUL4A-209ENST00000488558 G2E3Q7L622 706 aa29.61■■■□□ 2.33
CUL4A-209ENST00000488558 VAMP4O75379 141 aa29.6■■■□□ 2.33
CUL4A-209ENST00000488558 FLIIQ13045 1269 aa29.6■■■□□ 2.33
CUL4A-209ENST00000488558 CREBZFQ9NS37 354 aa29.6■■■□□ 2.33
CUL4A-209ENST00000488558 CXCL9Q07325 125 aa29.59■■■□□ 2.33
CUL4A-209ENST00000488558 MYH16Q9H6N6 1097 aa29.59■■■□□ 2.33
CUL4A-209ENST00000488558 NSFL1CQ9UNZ2 370 aaKnown RBP29.59■■■□□ 2.33
CUL4A-209ENST00000488558 ITGBL1O95965 494 aaPredicted RBP29.58■■■□□ 2.33
CUL4A-209ENST00000488558 EXOSC9Q06265 439 aaKnown RBP29.58■■■□□ 2.33
CUL4A-209ENST00000488558 CLEC11AQ9Y240 323 aa29.58■■■□□ 2.33
CUL4A-209ENST00000488558 NEURL1BA8MQ27 555 aa29.57■■■□□ 2.32
CUL4A-209ENST00000488558 GPSM2P81274 684 aa29.56■■■□□ 2.32
CUL4A-209ENST00000488558 CIAPIN1Q6FI81 312 aa29.56■■■□□ 2.32
CUL4A-209ENST00000488558 USP50Q70EL3 339 aaPredicted RBP29.56■■■□□ 2.32
CUL4A-209ENST00000488558 SEC31BQ9NQW1 1179 aa29.56■■■□□ 2.32
CUL4A-209ENST00000488558 PODXL2Q9NZ53 605 aa29.56■■■□□ 2.32
CUL4A-209ENST00000488558 GPRC5DQ9NZD1 345 aa29.56■■■□□ 2.32
CUL4A-209ENST00000488558 RTL9Q8NET4 1388 aa29.55■■■□□ 2.32
CUL4A-209ENST00000488558 EPS15P42566 896 aa29.55■■■□□ 2.32
CUL4A-209ENST00000488558 TNIP1Q15025 636 aa29.55■■■□□ 2.32
CUL4A-209ENST00000488558 WASHC4Q2M389 1173 aa29.55■■■□□ 2.32
CUL4A-209ENST00000488558 CWF19L2Q2TBE0 894 aaKnown RBP29.55■■■□□ 2.32
CUL4A-209ENST00000488558 EYA3Q99504 573 aa29.55■■■□□ 2.32
CUL4A-209ENST00000488558 SPINK5Q9NQ38 1064 aaPredicted RBP29.55■■■□□ 2.32
CUL4A-209ENST00000488558 CTSWP56202 376 aa29.54■■■□□ 2.32
CUL4A-209ENST00000488558 FKBP5Q13451 457 aaPredicted RBP29.54■■■□□ 2.32
CUL4A-209ENST00000488558 JARID2Q92833 1246 aaPredicted RBP29.54■■■□□ 2.32
CUL4A-209ENST00000488558 POLLQ9UGP5 575 aa29.54■■■□□ 2.32
CUL4A-209ENST00000488558 ZNF521Q96K83 1311 aa29.53■■■□□ 2.32
CUL4A-209ENST00000488558 ADARB2Q9NS39 739 aaKnown RBP29.53■■■□□ 2.32
CUL4A-209ENST00000488558 YDJCA8MPS7 323 aa29.52■■■□□ 2.32
CUL4A-209ENST00000488558 C6orf229H3BNL8 230 aa29.52■■■□□ 2.32
CUL4A-209ENST00000488558 H7C1W4 665 aa29.52■■■□□ 2.32
CUL4A-209ENST00000488558 CNTROBQ8N137 903 aa29.52■■■□□ 2.32
CUL4A-209ENST00000488558 TBC1D16Q8TBP0 767 aa29.52■■■□□ 2.32
CUL4A-209ENST00000488558 DNAAF4Q8WXU2 420 aa29.52■■■□□ 2.32
CUL4A-209ENST00000488558 GMPSP49915 693 aaPredicted RBP29.51■■■□□ 2.31
CUL4A-209ENST00000488558 MAP1SQ66K74 1059 aaPredicted RBP29.51■■■□□ 2.31
CUL4A-209ENST00000488558 LINS1Q8NG48 757 aa29.51■■■□□ 2.31
CUL4A-209ENST00000488558 RAD17O75943 681 aa29.5■■■□□ 2.31
CUL4A-209ENST00000488558 GCKRQ14397 625 aa29.5■■■□□ 2.31
CUL4A-209ENST00000488558 ANKRD18AQ8IVF6 992 aa29.5■■■□□ 2.31
CUL4A-209ENST00000488558 TTLL11Q8NHH1 800 aa29.5■■■□□ 2.31
CUL4A-209ENST00000488558 CDC5LQ99459 802 aaKnown RBP29.5■■■□□ 2.31
CUL4A-209ENST00000488558 SPEF2Q9C093 1822 aa29.5■■■□□ 2.31
CUL4A-209ENST00000488558 UBE3BQ7Z3V4 1068 aa29.49■■■□□ 2.31
CUL4A-209ENST00000488558 CCDC85AQ96PX6 553 aaPredicted RBP29.49■■■□□ 2.31
CUL4A-209ENST00000488558 PLA2G12BQ9BX93 195 aa29.49■■■□□ 2.31
CUL4A-209ENST00000488558 TMEM88BA6NKF7 163 aa29.48■■■□□ 2.31
CUL4A-209ENST00000488558 BCL2L13Q9BXK5 485 aa29.47■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms