RNA–Protein interactions for RNA: ENST00000488349.1

SCRN3-209, Transcript of secernin 3, humanhuman

TSL 4

Gene SCRN3, Length 568 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN3-209ENST00000488349 FKBP5Q13451 457 aaPredicted RBP28.58■■■□□ 2.17
SCRN3-209ENST00000488349 BBOX1O75936 387 aa28.57■■■□□ 2.16
SCRN3-209ENST00000488349 MYH3P11055 1940 aa28.56■■■□□ 2.16
SCRN3-209ENST00000488349 NEXNQ0ZGT2 675 aa28.56■■■□□ 2.16
SCRN3-209ENST00000488349 TRMT2AQ8IZ69 625 aaKnown RBP28.56■■■□□ 2.16
SCRN3-209ENST00000488349 DNAAF4Q8WXU2 420 aa28.56■■■□□ 2.16
SCRN3-209ENST00000488349 CDHR2Q9BYE9 1310 aa28.56■■■□□ 2.16
SCRN3-209ENST00000488349 IARSP41252 1262 aaKnown RBP28.55■■■□□ 2.16
SCRN3-209ENST00000488349 GRIPAP1Q4V328 841 aa28.55■■■□□ 2.16
SCRN3-209ENST00000488349 CELF1Q92879 486 aaKnown RBP28.55■■■□□ 2.16
SCRN3-209ENST00000488349 DUOX1Q9NRD9 1551 aa28.54■■■□□ 2.16
SCRN3-209ENST00000488349 SP8Q8IXZ3 490 aa28.54■■■□□ 2.16
SCRN3-209ENST00000488349 RRAGCQ9HB90 399 aa28.54■■■□□ 2.16
SCRN3-209ENST00000488349 PDE8AO60658 829 aa28.53■■■□□ 2.16
SCRN3-209ENST00000488349 LTBP1Q14766 1721 aa28.52■■■□□ 2.16
SCRN3-209ENST00000488349 F6X3S4 739 aa28.52■■■□□ 2.16
SCRN3-209ENST00000488349 POTECB2RU33 542 aa28.51■■■□□ 2.15
SCRN3-209ENST00000488349 H7C1W4 665 aa28.51■■■□□ 2.15
SCRN3-209ENST00000488349 GCKRQ14397 625 aa28.51■■■□□ 2.15
SCRN3-209ENST00000488349 LINS1Q8NG48 757 aa28.51■■■□□ 2.15
SCRN3-209ENST00000488349 RTFDC1Q9BY42 306 aaPredicted RBP28.51■■■□□ 2.15
SCRN3-209ENST00000488349 ZNF541Q9H0D2 1346 aa28.5■■■□□ 2.15
SCRN3-209ENST00000488349 HSP90B1P14625 803 aaKnown RBP28.5■■■□□ 2.15
SCRN3-209ENST00000488349 CASP7P55210 303 aa28.5■■■□□ 2.15
SCRN3-209ENST00000488349 SEC31BQ9NQW1 1179 aa28.5■■■□□ 2.15
SCRN3-209ENST00000488349 FZD9O00144 591 aa28.49■■■□□ 2.15
SCRN3-209ENST00000488349 TMC4Q7Z404 712 aa28.49■■■□□ 2.15
SCRN3-209ENST00000488349 MRPL50Q8N5N7 158 aaKnown RBP28.49■■■□□ 2.15
SCRN3-209ENST00000488349 TOMM70O94826 608 aa28.48■■■□□ 2.15
SCRN3-209ENST00000488349 DDNO94850 711 aaPredicted RBP28.48■■■□□ 2.15
SCRN3-209ENST00000488349 BEND3Q5T5X7 828 aa28.48■■■□□ 2.15
SCRN3-209ENST00000488349 DPY19L2Q6NUT2 758 aa28.48■■■□□ 2.15
SCRN3-209ENST00000488349 CTSWP56202 376 aa28.47■■■□□ 2.15
SCRN3-209ENST00000488349 CCDC152Q4G0S7 254 aa28.47■■■□□ 2.15
SCRN3-209ENST00000488349 UBE3BQ7Z3V4 1068 aa28.47■■■□□ 2.15
SCRN3-209ENST00000488349 MPNDQ8N594 471 aa28.46■■■□□ 2.15
SCRN3-209ENST00000488349 CCDC85AQ96PX6 553 aaPredicted RBP28.46■■■□□ 2.15
SCRN3-209ENST00000488349 VEGFAP15692 232 aaPredicted RBP28.45■■■□□ 2.14
SCRN3-209ENST00000488349 RPS8P62241 208 aaKnown RBP28.45■■■□□ 2.14
SCRN3-209ENST00000488349 DPP8Q6V1X1 898 aaPredicted RBP28.45■■■□□ 2.14
SCRN3-209ENST00000488349 TTLL11Q8NHH1 800 aa28.45■■■□□ 2.14
SCRN3-209ENST00000488349 SSH1Q8WYL5 1049 aa28.45■■■□□ 2.14
SCRN3-209ENST00000488349 TMX4Q9H1E5 349 aaPredicted RBP28.45■■■□□ 2.14
SCRN3-209ENST00000488349 SPEF2Q9C093 1822 aa28.45■■■□□ 2.14
SCRN3-209ENST00000488349 PLA2G12BQ9BX93 195 aa28.44■■■□□ 2.14
SCRN3-209ENST00000488349 SCN4AP35499 1836 aa28.43■■■□□ 2.14
SCRN3-209ENST00000488349 RTL9Q8NET4 1388 aa28.43■■■□□ 2.14
SCRN3-209ENST00000488349 AOC3Q16853 763 aa28.43■■■□□ 2.14
SCRN3-209ENST00000488349 LARGE2Q8N3Y3 721 aa28.43■■■□□ 2.14
SCRN3-209ENST00000488349 RBM46Q8TBY0 533 aaKnown RBP28.43■■■□□ 2.14
SCRN3-209ENST00000488349 L3MBTL3Q96JM7 780 aaPredicted RBP28.43■■■□□ 2.14
SCRN3-209ENST00000488349 VPS33BQ9H267 617 aa28.43■■■□□ 2.14
SCRN3-209ENST00000488349 PPIP5K2O43314 1243 aa28.42■■■□□ 2.14
SCRN3-209ENST00000488349 SUPT20HQ8NEM7 779 aa28.42■■■□□ 2.14
SCRN3-209ENST00000488349 JDP2Q8WYK2 163 aa28.42■■■□□ 2.14
SCRN3-209ENST00000488349 GPSM2P81274 684 aa28.41■■■□□ 2.14
SCRN3-209ENST00000488349 GREM2Q9H772 168 aa28.41■■■□□ 2.14
SCRN3-209ENST00000488349 KIAA2012Q0VF49 1180 aa28.4■■■□□ 2.14
SCRN3-209ENST00000488349 BCL2L13Q9BXK5 485 aa28.4■■■□□ 2.14
SCRN3-209ENST00000488349 ALDH1L2Q3SY69 923 aa28.39■■■□□ 2.14
SCRN3-209ENST00000488349 C16orf71Q8IYS4 520 aaPredicted RBP28.39■■■□□ 2.14
SCRN3-209ENST00000488349 NIM1KQ8IY84 436 aa28.38■■■□□ 2.13
SCRN3-209ENST00000488349 POLLQ9UGP5 575 aa28.38■■■□□ 2.13
SCRN3-209ENST00000488349 NSFL1CQ9UNZ2 370 aaKnown RBP28.38■■■□□ 2.13
SCRN3-209ENST00000488349 CSF1RP07333 972 aa28.37■■■□□ 2.13
SCRN3-209ENST00000488349 PTPRCP08575 1304 aa28.37■■■□□ 2.13
SCRN3-209ENST00000488349 CEP350Q5VT06 3117 aa28.36■■■□□ 2.13
SCRN3-209ENST00000488349 ALDH1L1O75891 902 aa28.36■■■□□ 2.13
SCRN3-209ENST00000488349 CT47B1P0C2W7 299 aaPredicted RBP28.36■■■□□ 2.13
SCRN3-209ENST00000488349 SLC4A10Q6U841 1118 aa28.36■■■□□ 2.13
SCRN3-209ENST00000488349 ANKRD18AQ8IVF6 992 aa28.36■■■□□ 2.13
SCRN3-209ENST00000488349 GPC2Q8N158 579 aa28.36■■■□□ 2.13
SCRN3-209ENST00000488349 PODXL2Q9NZ53 605 aa28.36■■■□□ 2.13
SCRN3-209ENST00000488349 GRM8O00222 908 aa28.35■■■□□ 2.13
SCRN3-209ENST00000488349 HSPA6P17066 643 aa28.35■■■□□ 2.13
SCRN3-209ENST00000488349 EIF6P56537 245 aaKnown RBP28.35■■■□□ 2.13
SCRN3-209ENST00000488349 FOXO4P98177 505 aa28.35■■■□□ 2.13
SCRN3-209ENST00000488349 FSTL1Q12841 308 aa28.34■■■□□ 2.13
SCRN3-209ENST00000488349 FAM161AQ3B820 660 aa28.34■■■□□ 2.13
SCRN3-209ENST00000488349 TBC1D16Q8TBP0 767 aa28.34■■■□□ 2.13
SCRN3-209ENST00000488349 CDC5LQ99459 802 aaKnown RBP28.34■■■□□ 2.13
SCRN3-209ENST00000488349 SRCIN1Q9C0H9 1055 aa28.34■■■□□ 2.13
SCRN3-209ENST00000488349 ADAMTSL1Q8N6G6 1762 aa28.34■■■□□ 2.13
SCRN3-209ENST00000488349 GPR101Q96P66 508 aaPredicted RBP28.33■■■□□ 2.13
SCRN3-209ENST00000488349 SMC4Q9NTJ3 1288 aa28.33■■■□□ 2.13
SCRN3-209ENST00000488349 ZNRF3Q9ULT6 936 aa28.33■■■□□ 2.13
SCRN3-209ENST00000488349 YDJCA8MPS7 323 aa28.32■■■□□ 2.12
SCRN3-209ENST00000488349 POTEIP0CG38 1075 aa28.32■■■□□ 2.12
SCRN3-209ENST00000488349 POTEJP0CG39 1038 aa28.32■■■□□ 2.12
SCRN3-209ENST00000488349 HNRNPUQ00839 825 aaKnown RBP eCLIP28.32■■■□□ 2.12
SCRN3-209ENST00000488349 EPHA10Q5JZY3 1008 aa28.32■■■□□ 2.12
SCRN3-209ENST00000488349 TAF1DQ9H5J8 278 aaPredicted RBP28.32■■■□□ 2.12
SCRN3-209ENST00000488349 IQCA1LA6NCM1 817 aa28.31■■■□□ 2.12
SCRN3-209ENST00000488349 ITGA6P23229 1130 aa28.31■■■□□ 2.12
SCRN3-209ENST00000488349 CXCL9Q07325 125 aa28.31■■■□□ 2.12
SCRN3-209ENST00000488349 SMC1BQ8NDV3 1235 aa28.31■■■□□ 2.12
SCRN3-209ENST00000488349 BSDC1Q9NW68 430 aaPredicted RBP28.31■■■□□ 2.12
SCRN3-209ENST00000488349 GJA3Q9Y6H8 435 aa28.31■■■□□ 2.12
SCRN3-209ENST00000488349 A0A1B0GUL6 1792 aa28.3■■■□□ 2.12
SCRN3-209ENST00000488349 UTYO14607 1347 aa28.3■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms