RNA–Protein interactions for RNA: ENST00000488106.1

RHBDD3-205, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 640 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-205ENST00000488106 TMX4Q9H1E5 349 aaPredicted RBP30.16■■■□□ 2.42
RHBDD3-205ENST00000488106 CDHR2Q9BYE9 1310 aa30.16■■■□□ 2.42
RHBDD3-205ENST00000488106 UBE3BQ7Z3V4 1068 aa30.15■■■□□ 2.42
RHBDD3-205ENST00000488106 BCL2L13Q9BXK5 485 aa30.15■■■□□ 2.42
RHBDD3-205ENST00000488106 ATP6V0A2Q9Y487 856 aa30.15■■■□□ 2.42
RHBDD3-205ENST00000488106 PDE8AO60658 829 aa30.14■■■□□ 2.42
RHBDD3-205ENST00000488106 LINS1Q8NG48 757 aa30.14■■■□□ 2.42
RHBDD3-205ENST00000488106 CCDC85AQ96PX6 553 aaPredicted RBP30.14■■■□□ 2.42
RHBDD3-205ENST00000488106 NMRK2Q9NPI5 230 aa30.14■■■□□ 2.42
RHBDD3-205ENST00000488106 KDM2BQ8NHM5 1336 aa30.14■■■□□ 2.42
RHBDD3-205ENST00000488106 LTBP1Q14766 1721 aa30.13■■■□□ 2.41
RHBDD3-205ENST00000488106 BBOX1O75936 387 aa30.13■■■□□ 2.41
RHBDD3-205ENST00000488106 GCKRQ14397 625 aa30.13■■■□□ 2.41
RHBDD3-205ENST00000488106 MRPL50Q8N5N7 158 aaKnown RBP30.13■■■□□ 2.41
RHBDD3-205ENST00000488106 SSH1Q8WYL5 1049 aa30.13■■■□□ 2.41
RHBDD3-205ENST00000488106 PSMD1Q99460 953 aa30.13■■■□□ 2.41
RHBDD3-205ENST00000488106 WDR90Q96KV7 1748 aa30.13■■■□□ 2.41
RHBDD3-205ENST00000488106 COL4A5P29400 1685 aa30.12■■■□□ 2.41
RHBDD3-205ENST00000488106 CELF1Q92879 486 aaKnown RBP30.12■■■□□ 2.41
RHBDD3-205ENST00000488106 DUOX1Q9NRD9 1551 aa30.11■■■□□ 2.41
RHBDD3-205ENST00000488106 IARSP41252 1262 aaKnown RBP30.11■■■□□ 2.41
RHBDD3-205ENST00000488106 CCDC152Q4G0S7 254 aa30.1■■■□□ 2.41
RHBDD3-205ENST00000488106 GRIPAP1Q4V328 841 aa30.1■■■□□ 2.41
RHBDD3-205ENST00000488106 SLC4A10Q6U841 1118 aa30.1■■■□□ 2.41
RHBDD3-205ENST00000488106 SP8Q8IXZ3 490 aa30.1■■■□□ 2.41
RHBDD3-205ENST00000488106 H7C1W4 665 aa30.09■■■□□ 2.41
RHBDD3-205ENST00000488106 CTSWP56202 376 aa30.09■■■□□ 2.41
RHBDD3-205ENST00000488106 BEND3Q5T5X7 828 aa30.09■■■□□ 2.41
RHBDD3-205ENST00000488106 SEC31BQ9NQW1 1179 aa30.09■■■□□ 2.41
RHBDD3-205ENST00000488106 SMC4Q9NTJ3 1288 aa30.09■■■□□ 2.41
RHBDD3-205ENST00000488106 GLTPD2A6NH11 291 aa30.07■■■□□ 2.4
RHBDD3-205ENST00000488106 KIF3CO14782 793 aa30.07■■■□□ 2.4
RHBDD3-205ENST00000488106 TMC4Q7Z404 712 aa30.07■■■□□ 2.4
RHBDD3-205ENST00000488106 SCN4AP35499 1836 aa30.06■■■□□ 2.4
RHBDD3-205ENST00000488106 A0A1B0GUL6 1792 aa30.06■■■□□ 2.4
RHBDD3-205ENST00000488106 ALDH1L2Q3SY69 923 aa30.06■■■□□ 2.4
RHBDD3-205ENST00000488106 DPP8Q6V1X1 898 aaPredicted RBP30.06■■■□□ 2.4
RHBDD3-205ENST00000488106 PTPRCP08575 1304 aa30.05■■■□□ 2.4
RHBDD3-205ENST00000488106 CT47B1P0C2W7 299 aaPredicted RBP30.05■■■□□ 2.4
RHBDD3-205ENST00000488106 MPNDQ8N594 471 aa30.05■■■□□ 2.4
RHBDD3-205ENST00000488106 CASP7P55210 303 aa30.04■■■□□ 2.4
RHBDD3-205ENST00000488106 RPS8P62241 208 aaKnown RBP30.04■■■□□ 2.4
RHBDD3-205ENST00000488106 DPY19L2Q6NUT2 758 aa30.04■■■□□ 2.4
RHBDD3-205ENST00000488106 RRAGCQ9HB90 399 aa30.04■■■□□ 2.4
RHBDD3-205ENST00000488106 C1QTNF8P60827 252 aa30.03■■■□□ 2.4
RHBDD3-205ENST00000488106 LARGE2Q8N3Y3 721 aa30.03■■■□□ 2.4
RHBDD3-205ENST00000488106 TTLL11Q8NHH1 800 aa30.03■■■□□ 2.4
RHBDD3-205ENST00000488106 ZNF541Q9H0D2 1346 aa30.02■■■□□ 2.4
RHBDD3-205ENST00000488106 PPIP5K2O43314 1243 aa30.02■■■□□ 2.4
RHBDD3-205ENST00000488106 AOC3Q16853 763 aa30.02■■■□□ 2.4
RHBDD3-205ENST00000488106 JDP2Q8WYK2 163 aa30.02■■■□□ 2.4
RHBDD3-205ENST00000488106 SRCIN1Q9C0H9 1055 aa30.02■■■□□ 2.4
RHBDD3-205ENST00000488106 GREM2Q9H772 168 aa30.02■■■□□ 2.4
RHBDD3-205ENST00000488106 SUPT20HQ8NEM7 779 aa30.01■■■□□ 2.39
RHBDD3-205ENST00000488106 DDNO94850 711 aaPredicted RBP30■■■□□ 2.39
RHBDD3-205ENST00000488106 PLA2G12BQ9BX93 195 aa30■■■□□ 2.39
RHBDD3-205ENST00000488106 RTFDC1Q9BY42 306 aaPredicted RBP30■■■□□ 2.39
RHBDD3-205ENST00000488106 GRM8O00222 908 aa29.99■■■□□ 2.39
RHBDD3-205ENST00000488106 ALDH1L1O75891 902 aa29.99■■■□□ 2.39
RHBDD3-205ENST00000488106 ANKRD18AQ8IVF6 992 aa29.99■■■□□ 2.39
RHBDD3-205ENST00000488106 CDC5LQ99459 802 aaKnown RBP29.99■■■□□ 2.39
RHBDD3-205ENST00000488106 C9orf78Q9NZ63 289 aaPredicted RBP29.99■■■□□ 2.39
RHBDD3-205ENST00000488106 NSFL1CQ9UNZ2 370 aaKnown RBP29.99■■■□□ 2.39
RHBDD3-205ENST00000488106 RTL9Q8NET4 1388 aa29.99■■■□□ 2.39
RHBDD3-205ENST00000488106 GPSM2P81274 684 aa29.98■■■□□ 2.39
RHBDD3-205ENST00000488106 C16orf71Q8IYS4 520 aaPredicted RBP29.98■■■□□ 2.39
RHBDD3-205ENST00000488106 ZBED9Q6R2W3 1325 aa29.97■■■□□ 2.39
RHBDD3-205ENST00000488106 FAM161AQ3B820 660 aa29.97■■■□□ 2.39
RHBDD3-205ENST00000488106 NIM1KQ8IY84 436 aa29.97■■■□□ 2.39
RHBDD3-205ENST00000488106 PSME4Q14997 1843 aa29.95■■■□□ 2.39
RHBDD3-205ENST00000488106 FZD9O00144 591 aa29.95■■■□□ 2.39
RHBDD3-205ENST00000488106 RARSP54136 660 aaKnown RBP29.95■■■□□ 2.39
RHBDD3-205ENST00000488106 SCN9AQ15858 1988 aa29.95■■■□□ 2.38
RHBDD3-205ENST00000488106 VEGFAP15692 232 aaPredicted RBP29.94■■■□□ 2.38
RHBDD3-205ENST00000488106 EIF6P56537 245 aaKnown RBP29.94■■■□□ 2.38
RHBDD3-205ENST00000488106 NOB1Q9ULX3 412 aaKnown RBP29.94■■■□□ 2.38
RHBDD3-205ENST00000488106 CHMP3Q9Y3E7 222 aa29.94■■■□□ 2.38
RHBDD3-205ENST00000488106 C6orf229H3BNL8 230 aa29.93■■■□□ 2.38
RHBDD3-205ENST00000488106 ITGA6P23229 1130 aa29.93■■■□□ 2.38
RHBDD3-205ENST00000488106 VPS33BQ9H267 617 aa29.93■■■□□ 2.38
RHBDD3-205ENST00000488106 ANKIB1Q9P2G1 1089 aa29.93■■■□□ 2.38
RHBDD3-205ENST00000488106 TOMM70O94826 608 aa29.92■■■□□ 2.38
RHBDD3-205ENST00000488106 CSF1RP07333 972 aa29.92■■■□□ 2.38
RHBDD3-205ENST00000488106 FOXO4P98177 505 aa29.92■■■□□ 2.38
RHBDD3-205ENST00000488106 KIAA2012Q0VF49 1180 aa29.92■■■□□ 2.38
RHBDD3-205ENST00000488106 GPR101Q96P66 508 aaPredicted RBP29.92■■■□□ 2.38
RHBDD3-205ENST00000488106 POLLQ9UGP5 575 aa29.92■■■□□ 2.38
RHBDD3-205ENST00000488106 POTECB2RU33 542 aa29.91■■■□□ 2.38
RHBDD3-205ENST00000488106 EPHA10Q5JZY3 1008 aa29.91■■■□□ 2.38
RHBDD3-205ENST00000488106 GJA3Q9Y6H8 435 aa29.91■■■□□ 2.38
RHBDD3-205ENST00000488106 UFL1O94874 794 aa29.9■■■□□ 2.38
RHBDD3-205ENST00000488106 NBPF7P0C2Y1 421 aaPredicted RBP29.9■■■□□ 2.38
RHBDD3-205ENST00000488106 IGHMBP2P38935 993 aaKnown RBP29.9■■■□□ 2.38
RHBDD3-205ENST00000488106 TBC1D16Q8TBP0 767 aa29.9■■■□□ 2.38
RHBDD3-205ENST00000488106 RIMBP2O15034 1052 aa29.89■■■□□ 2.38
RHBDD3-205ENST00000488106 BRPF1P55201 1214 aaPredicted RBP29.89■■■□□ 2.38
RHBDD3-205ENST00000488106 WASHC4Q2M389 1173 aa29.89■■■□□ 2.38
RHBDD3-205ENST00000488106 LMBR1LQ6UX01 489 aa29.89■■■□□ 2.38
RHBDD3-205ENST00000488106 SUCLG2Q96I99 432 aa29.89■■■□□ 2.38
RHBDD3-205ENST00000488106 KIF16BQ96L93 1317 aa29.89■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms