RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 NFKB1P19838 968 aa6.78□□□□□ -1.32
ECHDC1-217ENST00000488087 TARSP26639 723 aaKnown RBP6.78□□□□□ -1.32
ECHDC1-217ENST00000488087 MFAP1P55081 439 aaKnown RBP6.78□□□□□ -1.32
ECHDC1-217ENST00000488087 GJD3Q8N144 294 aa6.78□□□□□ -1.32
ECHDC1-217ENST00000488087 RBCK1Q9BYM8 510 aa6.78□□□□□ -1.32
ECHDC1-217ENST00000488087 KRTAP4-8Q9BYQ9 185 aa6.78□□□□□ -1.32
ECHDC1-217ENST00000488087 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.78□□□□□ -1.32
ECHDC1-217ENST00000488087 C2CD2LO14523 706 aa6.77□□□□□ -1.33
ECHDC1-217ENST00000488087 EGFRP00533 1210 aa6.77□□□□□ -1.33
ECHDC1-217ENST00000488087 RARAP10276 462 aa6.77□□□□□ -1.33
ECHDC1-217ENST00000488087 MAP2K3P46734 347 aa6.77□□□□□ -1.33
ECHDC1-217ENST00000488087 PCBP4P57723 403 aaKnown RBP6.77□□□□□ -1.33
ECHDC1-217ENST00000488087 PDE12Q6L8Q7 609 aaKnown RBP6.77□□□□□ -1.33
ECHDC1-217ENST00000488087 TMC7Q7Z402 723 aa6.77□□□□□ -1.33
ECHDC1-217ENST00000488087 NLRP13Q86W25 1043 aa6.77□□□□□ -1.33
ECHDC1-217ENST00000488087 ASB16Q96NS5 453 aa6.77□□□□□ -1.33
ECHDC1-217ENST00000488087 CCDC9Q9Y3X0 531 aaKnown RBP6.77□□□□□ -1.33
ECHDC1-217ENST00000488087 IGF1RP08069 1367 aa6.77□□□□□ -1.33
ECHDC1-217ENST00000488087 TBC1D8BQ0IIM8 1120 aa6.76□□□□□ -1.33
ECHDC1-217ENST00000488087 TTC39BQ5VTQ0 682 aaPredicted RBP6.76□□□□□ -1.33
ECHDC1-217ENST00000488087 SYT9Q86SS6 491 aa6.76□□□□□ -1.33
ECHDC1-217ENST00000488087 DMRTB1Q96MA1 342 aa6.76□□□□□ -1.33
ECHDC1-217ENST00000488087 FAM129BQ96TA1 746 aa6.76□□□□□ -1.33
ECHDC1-217ENST00000488087 IGFLR1Q9H665 355 aa6.76□□□□□ -1.33
ECHDC1-217ENST00000488087 ELP3Q9H9T3 547 aa6.76□□□□□ -1.33
ECHDC1-217ENST00000488087 EFCC1Q9HA90 598 aa6.76□□□□□ -1.33
ECHDC1-217ENST00000488087 GPR182O15218 404 aa6.75□□□□□ -1.33
ECHDC1-217ENST00000488087 KRT76Q01546 638 aa6.75□□□□□ -1.33
ECHDC1-217ENST00000488087 SRSF11Q05519 484 aaKnown RBP6.75□□□□□ -1.33
ECHDC1-217ENST00000488087 ZNF468Q5VIY5 522 aaPredicted RBP6.75□□□□□ -1.33
ECHDC1-217ENST00000488087 NIF3L1Q9GZT8 377 aa6.75□□□□□ -1.33
ECHDC1-217ENST00000488087 ABI2Q9NYB9 513 aaPredicted RBP6.75□□□□□ -1.33
ECHDC1-217ENST00000488087 TMEM63CQ9P1W3 806 aa6.75□□□□□ -1.33
ECHDC1-217ENST00000488087 ANKRD33BA6NCL7 494 aa6.74□□□□□ -1.33
ECHDC1-217ENST00000488087 ADAMTS2O95450 1211 aa6.74□□□□□ -1.33
ECHDC1-217ENST00000488087 IGHA1P01876 353 aa6.74□□□□□ -1.33
ECHDC1-217ENST00000488087 NEFLP07196 543 aa6.74□□□□□ -1.33
ECHDC1-217ENST00000488087 ARAFP10398 606 aa6.74□□□□□ -1.33
ECHDC1-217ENST00000488087 ADH6P28332 368 aa6.74□□□□□ -1.33
ECHDC1-217ENST00000488087 XKR5Q6UX68 686 aa6.74□□□□□ -1.33
ECHDC1-217ENST00000488087 UBE2OQ9C0C9 1292 aaKnown RBP6.74□□□□□ -1.33
ECHDC1-217ENST00000488087 AVENQ9NQS1 362 aaPredicted RBP6.74□□□□□ -1.33
ECHDC1-217ENST00000488087 ZFATQ9P243 1243 aa6.74□□□□□ -1.33
ECHDC1-217ENST00000488087 NEURL1BA8MQ27 555 aa6.73□□□□□ -1.33
ECHDC1-217ENST00000488087 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.73□□□□□ -1.33
ECHDC1-217ENST00000488087 MMP20O60882 483 aa6.73□□□□□ -1.33
ECHDC1-217ENST00000488087 PHACTR2O75167 634 aa6.73□□□□□ -1.33
ECHDC1-217ENST00000488087 SIN3BO75182 1162 aa6.73□□□□□ -1.33
ECHDC1-217ENST00000488087 TNFRSF21O75509 655 aa6.73□□□□□ -1.33
ECHDC1-217ENST00000488087 PSAPP07602 524 aa6.73□□□□□ -1.33
ECHDC1-217ENST00000488087 DHX32Q7L7V1 743 aaKnown RBP6.73□□□□□ -1.33
ECHDC1-217ENST00000488087 SNX29Q8TEQ0 813 aa6.73□□□□□ -1.33
ECHDC1-217ENST00000488087 OXCT2Q9BYC2 517 aaPredicted RBP6.73□□□□□ -1.33
ECHDC1-217ENST00000488087 FOXD3Q9UJU5 478 aaPredicted RBP6.73□□□□□ -1.33
ECHDC1-217ENST00000488087 GGA1Q9UJY5 639 aa6.73□□□□□ -1.33
ECHDC1-217ENST00000488087 PHF20L1A8MW92 1017 aa6.72□□□□□ -1.33
ECHDC1-217ENST00000488087 MAP3K6O95382 1288 aa6.72□□□□□ -1.33
ECHDC1-217ENST00000488087 MAPK8P45983 427 aa6.72□□□□□ -1.33
ECHDC1-217ENST00000488087 PLCB3Q01970 1234 aa6.72□□□□□ -1.33
ECHDC1-217ENST00000488087 GPAT2Q6NUI2 795 aa6.72□□□□□ -1.33
ECHDC1-217ENST00000488087 DNAJC14Q6Y2X3 702 aaPredicted RBP6.72□□□□□ -1.33
ECHDC1-217ENST00000488087 GOLGA6L1Q8N7Z2 621 aa6.72□□□□□ -1.33
ECHDC1-217ENST00000488087 TLR7Q9NYK1 1049 aaKnown RBP6.72□□□□□ -1.33
ECHDC1-217ENST00000488087 GDF2Q9UK05 429 aaPredicted RBP6.72□□□□□ -1.33
ECHDC1-217ENST00000488087 TREHO43280 583 aa6.71□□□□□ -1.34
ECHDC1-217ENST00000488087 ERCC3P19447 782 aa6.71□□□□□ -1.34
ECHDC1-217ENST00000488087 CES1P23141 567 aa6.71□□□□□ -1.34
ECHDC1-217ENST00000488087 PLAURQ03405 335 aa6.71□□□□□ -1.34
ECHDC1-217ENST00000488087 ORC1Q13415 861 aa6.71□□□□□ -1.34
ECHDC1-217ENST00000488087 C1orf127Q8N9H9 656 aa6.71□□□□□ -1.34
ECHDC1-217ENST00000488087 CNTN3Q9P232 1028 aa6.71□□□□□ -1.34
ECHDC1-217ENST00000488087 ADAMTS8Q9UP79 889 aa6.71□□□□□ -1.34
ECHDC1-217ENST00000488087 CPNE3O75131 537 aaKnown RBP6.7□□□□□ -1.34
ECHDC1-217ENST00000488087 IGHA2P01877 340 aa6.7□□□□□ -1.34
ECHDC1-217ENST00000488087 CYP2E1P05181 493 aaPredicted RBP6.7□□□□□ -1.34
ECHDC1-217ENST00000488087 MLLT1Q03111 559 aaPredicted RBP6.7□□□□□ -1.34
ECHDC1-217ENST00000488087 PCSK7Q16549 785 aa6.7□□□□□ -1.34
ECHDC1-217ENST00000488087 XP32Q5T750 250 aa6.7□□□□□ -1.34
ECHDC1-217ENST00000488087 SLCO4C1Q6ZQN7 724 aa6.7□□□□□ -1.34
ECHDC1-217ENST00000488087 OR13H1Q8NG92 308 aa6.7□□□□□ -1.34
ECHDC1-217ENST00000488087 PMEPA1Q969W9 287 aa6.7□□□□□ -1.34
ECHDC1-217ENST00000488087 ACDQ96AP0 544 aa6.7□□□□□ -1.34
ECHDC1-217ENST00000488087 ALKBH8Q96BT7 664 aaKnown RBP6.7□□□□□ -1.34
ECHDC1-217ENST00000488087 NSUN5Q96P11 429 aaKnown RBP6.7□□□□□ -1.34
ECHDC1-217ENST00000488087 DNAJB12Q9NXW2 375 aaKnown RBP6.7□□□□□ -1.34
ECHDC1-217ENST00000488087 KANSL3Q9P2N6 904 aa6.7□□□□□ -1.34
ECHDC1-217ENST00000488087 KLF15Q9UIH9 416 aa6.7□□□□□ -1.34
ECHDC1-217ENST00000488087 EIF1AYO14602 144 aaKnown RBP6.69□□□□□ -1.34
ECHDC1-217ENST00000488087 SLURP2P0DP57 97 aa6.69□□□□□ -1.34
ECHDC1-217ENST00000488087 ALAS2P22557 587 aa6.69□□□□□ -1.34
ECHDC1-217ENST00000488087 SOX18P35713 384 aa6.69□□□□□ -1.34
ECHDC1-217ENST00000488087 ADH7P40394 386 aa6.69□□□□□ -1.34
ECHDC1-217ENST00000488087 NRLP54845 237 aa6.69□□□□□ -1.34
ECHDC1-217ENST00000488087 FCHSD1Q86WN1 690 aa6.69□□□□□ -1.34
ECHDC1-217ENST00000488087 NCAPG2Q86XI2 1143 aa6.69□□□□□ -1.34
ECHDC1-217ENST00000488087 TNFRSF25Q93038 417 aa6.69□□□□□ -1.34
ECHDC1-217ENST00000488087 SPACA7Q96KW9 195 aa6.69□□□□□ -1.34
ECHDC1-217ENST00000488087 CSRNP1Q96S65 589 aa6.69□□□□□ -1.34
ECHDC1-217ENST00000488087 KRTAP9-2Q9BYQ4 174 aa6.69□□□□□ -1.34
ECHDC1-217ENST00000488087 AMOTL2Q9Y2J4 779 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms