RNA–Protein interactions for RNA: ENST00000487899.1

RAB11FIP3-210, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-210ENST00000487899 FANCIQ9NVI1 1328 aa14.5□□□□□ -0.09
RAB11FIP3-210ENST00000487899 ANP32CO43423 234 aa14.5□□□□□ -0.09
RAB11FIP3-210ENST00000487899 SCNN1DP51172 638 aa14.5□□□□□ -0.09
RAB11FIP3-210ENST00000487899 AOC3Q16853 763 aa14.5□□□□□ -0.09
RAB11FIP3-210ENST00000487899 NCBP3Q53F19 620 aaKnown RBP14.5□□□□□ -0.09
RAB11FIP3-210ENST00000487899 LDHDQ86WU2 507 aa14.5□□□□□ -0.09
RAB11FIP3-210ENST00000487899 LARGE2Q8N3Y3 721 aa14.5□□□□□ -0.09
RAB11FIP3-210ENST00000487899 JDP2Q8WYK2 163 aa14.5□□□□□ -0.09
RAB11FIP3-210ENST00000487899 HACL1Q9UJ83 578 aa14.5□□□□□ -0.09
RAB11FIP3-210ENST00000487899 PPIP5K2O43314 1243 aa14.49□□□□□ -0.09
RAB11FIP3-210ENST00000487899 BBOX1O75936 387 aa14.49□□□□□ -0.09
RAB11FIP3-210ENST00000487899 EPHX2P34913 555 aa14.49□□□□□ -0.09
RAB11FIP3-210ENST00000487899 SF3B3Q15393 1217 aaKnown RBP14.49□□□□□ -0.09
RAB11FIP3-210ENST00000487899 RTL5Q5HYW3 569 aaPredicted RBP14.49□□□□□ -0.09
RAB11FIP3-210ENST00000487899 DDX46Q7L014 1031 aaKnown RBP14.49□□□□□ -0.09
RAB11FIP3-210ENST00000487899 RIC3Q7Z5B4 369 aa14.49□□□□□ -0.09
RAB11FIP3-210ENST00000487899 SP8Q8IXZ3 490 aa14.49□□□□□ -0.09
RAB11FIP3-210ENST00000487899 CELF1Q92879 486 aaKnown RBP14.49□□□□□ -0.09
RAB11FIP3-210ENST00000487899 MYD88Q99836 296 aa14.49□□□□□ -0.09
RAB11FIP3-210ENST00000487899 IRS4O14654 1257 aaPredicted RBP14.48□□□□□ -0.09
RAB11FIP3-210ENST00000487899 CCDC30Q5VVM6 783 aa14.48□□□□□ -0.09
RAB11FIP3-210ENST00000487899 DPP8Q6V1X1 898 aaPredicted RBP14.48□□□□□ -0.09
RAB11FIP3-210ENST00000487899 NIM1KQ8IY84 436 aa14.48□□□□□ -0.09
RAB11FIP3-210ENST00000487899 KIAA2012Q0VF49 1180 aa14.47□□□□□ -0.09
RAB11FIP3-210ENST00000487899 TWISTNBQ3B726 338 aaPredicted RBP14.47□□□□□ -0.09
RAB11FIP3-210ENST00000487899 COL13A1Q5TAT6 717 aaPredicted RBP14.47□□□□□ -0.09
RAB11FIP3-210ENST00000487899 TMC4Q7Z404 712 aa14.47□□□□□ -0.09
RAB11FIP3-210ENST00000487899 ZBTB38Q8NAP3 1195 aaPredicted RBP14.47□□□□□ -0.09
RAB11FIP3-210ENST00000487899 METTL22Q9BUU2 404 aaPredicted RBP14.47□□□□□ -0.09
RAB11FIP3-210ENST00000487899 VPS33BQ9H267 617 aa14.47□□□□□ -0.09
RAB11FIP3-210ENST00000487899 POLR2AP24928 1970 aaKnown RBP14.47□□□□□ -0.09
RAB11FIP3-210ENST00000487899 IGKV5-2P06315 115 aa14.46□□□□□ -0.09
RAB11FIP3-210ENST00000487899 EIF6P56537 245 aaKnown RBP14.46□□□□□ -0.09
RAB11FIP3-210ENST00000487899 EAPPQ56P03 285 aaPredicted RBP14.46□□□□□ -0.09
RAB11FIP3-210ENST00000487899 CCDC191Q8NCU4 936 aa14.46□□□□□ -0.09
RAB11FIP3-210ENST00000487899 SUPT20HQ8NEM7 779 aa14.46□□□□□ -0.09
RAB11FIP3-210ENST00000487899 MAP3K2Q9Y2U5 619 aa14.46□□□□□ -0.09
RAB11FIP3-210ENST00000487899 GJA3Q9Y6H8 435 aa14.46□□□□□ -0.09
RAB11FIP3-210ENST00000487899 CDHR2Q9BYE9 1310 aa14.45□□□□□ -0.1
RAB11FIP3-210ENST00000487899 YDJCA8MPS7 323 aa14.45□□□□□ -0.1
RAB11FIP3-210ENST00000487899 DDX58O95786 925 aaKnown RBP14.45□□□□□ -0.1
RAB11FIP3-210ENST00000487899 ITGBL1O95965 494 aaPredicted RBP14.45□□□□□ -0.1
RAB11FIP3-210ENST00000487899 PCCAP05165 728 aaPredicted RBP14.45□□□□□ -0.1
RAB11FIP3-210ENST00000487899 G2E3Q7L622 706 aa14.45□□□□□ -0.1
RAB11FIP3-210ENST00000487899 MPNDQ8N594 471 aa14.45□□□□□ -0.1
RAB11FIP3-210ENST00000487899 CREBZFQ9NS37 354 aa14.45□□□□□ -0.1
RAB11FIP3-210ENST00000487899 CWC25Q9NXE8 425 aaPredicted RBP14.45□□□□□ -0.1
RAB11FIP3-210ENST00000487899 PI4KAP2A4QPH2 592 aa14.44□□□□□ -0.1
RAB11FIP3-210ENST00000487899 EPS15P42566 896 aa14.44□□□□□ -0.1
RAB11FIP3-210ENST00000487899 CXCL9Q07325 125 aa14.44□□□□□ -0.1
RAB11FIP3-210ENST00000487899 KSR2Q6VAB6 950 aa14.44□□□□□ -0.1
RAB11FIP3-210ENST00000487899 PNMA8AQ86V59 439 aaPredicted RBP14.44□□□□□ -0.1
RAB11FIP3-210ENST00000487899 PI4KAP1Q8N8J0 262 aa14.44□□□□□ -0.1
RAB11FIP3-210ENST00000487899 SPINK5Q9NQ38 1064 aaPredicted RBP14.44□□□□□ -0.1
RAB11FIP3-210ENST00000487899 SEC31BQ9NQW1 1179 aa14.44□□□□□ -0.1
RAB11FIP3-210ENST00000487899 ZNRF3Q9ULT6 936 aa14.44□□□□□ -0.1
RAB11FIP3-210ENST00000487899 CNTNAP1P78357 1384 aa14.44□□□□□ -0.1
RAB11FIP3-210ENST00000487899 GPSM2P81274 684 aa14.43□□□□□ -0.1
RAB11FIP3-210ENST00000487899 MAP1SQ66K74 1059 aaPredicted RBP14.43□□□□□ -0.1
RAB11FIP3-210ENST00000487899 WDR63Q8IWG1 891 aa14.43□□□□□ -0.1
RAB11FIP3-210ENST00000487899 JARID2Q92833 1246 aaPredicted RBP14.43□□□□□ -0.1
RAB11FIP3-210ENST00000487899 STK31Q9BXU1 1019 aa14.43□□□□□ -0.1
RAB11FIP3-210ENST00000487899 TMX4Q9H1E5 349 aaPredicted RBP14.43□□□□□ -0.1
RAB11FIP3-210ENST00000487899 GPRC5DQ9NZD1 345 aa14.43□□□□□ -0.1
RAB11FIP3-210ENST00000487899 RTL9Q8NET4 1388 aa14.43□□□□□ -0.1
RAB11FIP3-210ENST00000487899 ARAP2Q8WZ64 1704 aa14.43□□□□□ -0.1
RAB11FIP3-210ENST00000487899 NEURL1BA8MQ27 555 aa14.42□□□□□ -0.1
RAB11FIP3-210ENST00000487899 PDE8AO60658 829 aa14.42□□□□□ -0.1
RAB11FIP3-210ENST00000487899 LMOD1P29536 600 aaPredicted RBP14.42□□□□□ -0.1
RAB11FIP3-210ENST00000487899 CWF19L2Q2TBE0 894 aaKnown RBP14.42□□□□□ -0.1
RAB11FIP3-210ENST00000487899 GPR101Q96P66 508 aaPredicted RBP14.42□□□□□ -0.1
RAB11FIP3-210ENST00000487899 CHMP4AQ9BY43 222 aa14.42□□□□□ -0.1
RAB11FIP3-210ENST00000487899 POLLQ9UGP5 575 aa14.42□□□□□ -0.1
RAB11FIP3-210ENST00000487899 ECM29Q5VYK3 1845 aa14.42□□□□□ -0.1
RAB11FIP3-210ENST00000487899 ZNF521Q96K83 1311 aa14.41□□□□□ -0.1
RAB11FIP3-210ENST00000487899 ZNF609O15014 1411 aa14.41□□□□□ -0.1
RAB11FIP3-210ENST00000487899 GMPSP49915 693 aaPredicted RBP14.41□□□□□ -0.1
RAB11FIP3-210ENST00000487899 FLIIQ13045 1269 aa14.41□□□□□ -0.1
RAB11FIP3-210ENST00000487899 SALL2Q9Y467 1007 aaPredicted RBP14.41□□□□□ -0.1
RAB11FIP3-210ENST00000487899 RAD17O75943 681 aa14.4□□□□□ -0.1
RAB11FIP3-210ENST00000487899 SLC4A2P04920 1241 aa14.4□□□□□ -0.1
RAB11FIP3-210ENST00000487899 CTSWP56202 376 aa14.4□□□□□ -0.1
RAB11FIP3-210ENST00000487899 RPS8P62241 208 aaKnown RBP14.4□□□□□ -0.1
RAB11FIP3-210ENST00000487899 EXOSC9Q06265 439 aaKnown RBP14.4□□□□□ -0.1
RAB11FIP3-210ENST00000487899 CCDC152Q4G0S7 254 aa14.4□□□□□ -0.1
RAB11FIP3-210ENST00000487899 CCDC85AQ96PX6 553 aaPredicted RBP14.4□□□□□ -0.1
RAB11FIP3-210ENST00000487899 PODXL2Q9NZ53 605 aa14.4□□□□□ -0.1
RAB11FIP3-210ENST00000487899 NSFL1CQ9UNZ2 370 aaKnown RBP14.4□□□□□ -0.1
RAB11FIP3-210ENST00000487899 SHTN1A0MZ66 631 aa14.39□□□□□ -0.11
RAB11FIP3-210ENST00000487899 VAMP4O75379 141 aa14.39□□□□□ -0.11
RAB11FIP3-210ENST00000487899 HSP90B1P14625 803 aaKnown RBP14.39□□□□□ -0.11
RAB11FIP3-210ENST00000487899 CASP7P55210 303 aa14.39□□□□□ -0.11
RAB11FIP3-210ENST00000487899 CIAPIN1Q6FI81 312 aa14.39□□□□□ -0.11
RAB11FIP3-210ENST00000487899 USP50Q70EL3 339 aaPredicted RBP14.39□□□□□ -0.11
RAB11FIP3-210ENST00000487899 FAM9BQ8IZU0 186 aa14.39□□□□□ -0.11
RAB11FIP3-210ENST00000487899 CNTROBQ8N137 903 aa14.39□□□□□ -0.11
RAB11FIP3-210ENST00000487899 TBC1D16Q8TBP0 767 aa14.39□□□□□ -0.11
RAB11FIP3-210ENST00000487899 DBNDD1Q9H9R9 158 aa14.39□□□□□ -0.11
RAB11FIP3-210ENST00000487899 ADARB2Q9NS39 739 aaKnown RBP14.39□□□□□ -0.11
RAB11FIP3-210ENST00000487899 MKRN1Q9UHC7 482 aaKnown RBP14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms