RNA–Protein interactions for RNA: ENST00000487625.1

USP9X-208, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 2

Gene USP9X, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-208ENST00000487625 SETDB1Q15047 1291 aa7.1□□□□□ -1.27
USP9X-208ENST00000487625 TRPM4Q8TD43 1214 aa7.1□□□□□ -1.27
USP9X-208ENST00000487625 UTP4Q969X6 686 aaKnown RBP7.1□□□□□ -1.27
USP9X-208ENST00000487625 HCN4Q9Y3Q4 1203 aa7.1□□□□□ -1.27
USP9X-208ENST00000487625 MSMPQ1L6U9 139 aa7.09□□□□□ -1.27
USP9X-208ENST00000487625 UVSSAQ2YD98 709 aa7.09□□□□□ -1.27
USP9X-208ENST00000487625 POTEAQ6S8J7 498 aa7.09□□□□□ -1.27
USP9X-208ENST00000487625 TNS4Q8IZW8 715 aa7.09□□□□□ -1.27
USP9X-208ENST00000487625 FAM46AQ96IP4 442 aaKnown RBP7.09□□□□□ -1.27
USP9X-208ENST00000487625 CCDC39Q9UFE4 941 aa7.09□□□□□ -1.27
USP9X-208ENST00000487625 PRRG2O14669 202 aa7.08□□□□□ -1.28
USP9X-208ENST00000487625 MAP3K6O95382 1288 aa7.08□□□□□ -1.28
USP9X-208ENST00000487625 WISP1O95388 367 aa7.08□□□□□ -1.28
USP9X-208ENST00000487625 SRA1Q9HD15 236 aaKnown RBP7.08□□□□□ -1.28
USP9X-208ENST00000487625 ZFATQ9P243 1243 aa7.08□□□□□ -1.28
USP9X-208ENST00000487625 GPLD1P80108 840 aa7.07□□□□□ -1.28
USP9X-208ENST00000487625 DHX32Q7L7V1 743 aaKnown RBP7.07□□□□□ -1.28
USP9X-208ENST00000487625 MYRFLQ96LU7 910 aa7.07□□□□□ -1.28
USP9X-208ENST00000487625 PAPLNO95428 1278 aa7.06□□□□□ -1.28
USP9X-208ENST00000487625 GRNP28799 593 aaKnown RBP7.06□□□□□ -1.28
USP9X-208ENST00000487625 CEP41Q9BYV8 373 aa7.06□□□□□ -1.28
USP9X-208ENST00000487625 PIM2Q9P1W9 311 aa7.06□□□□□ -1.28
USP9X-208ENST00000487625 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.06□□□□□ -1.28
USP9X-208ENST00000487625 WDR64B1ANS9 1081 aa7.05□□□□□ -1.28
USP9X-208ENST00000487625 PRNPP04156 253 aa7.05□□□□□ -1.28
USP9X-208ENST00000487625 PSMA6P60900 246 aaKnown RBP7.05□□□□□ -1.28
USP9X-208ENST00000487625 MAP4K3Q8IVH8 894 aa7.05□□□□□ -1.28
USP9X-208ENST00000487625 PCMTD1Q96MG8 357 aaPredicted RBP7.05□□□□□ -1.28
USP9X-208ENST00000487625 FAM83CQ9BQN1 747 aa7.05□□□□□ -1.28
USP9X-208ENST00000487625 LILRA6Q6PI73 481 aa7.04□□□□□ -1.28
USP9X-208ENST00000487625 HFE2Q6ZVN8 426 aa7.04□□□□□ -1.28
USP9X-208ENST00000487625 CLEC10AQ8IUN9 316 aa7.04□□□□□ -1.28
USP9X-208ENST00000487625 TP53INP2Q8IXH6 220 aa7.04□□□□□ -1.28
USP9X-208ENST00000487625 DCAF11Q8TEB1 546 aa7.04□□□□□ -1.28
USP9X-208ENST00000487625 FBXL18Q96ME1 805 aa7.04□□□□□ -1.28
USP9X-208ENST00000487625 BUD31P41223 144 aaPredicted RBP7.03□□□□□ -1.28
USP9X-208ENST00000487625 VSIG10LQ86VR7 867 aa7.03□□□□□ -1.28
USP9X-208ENST00000487625 FAM20CQ8IXL6 584 aa7.03□□□□□ -1.28
USP9X-208ENST00000487625 IL22RA1Q8N6P7 574 aa7.03□□□□□ -1.28
USP9X-208ENST00000487625 GOPCQ9HD26 462 aa7.03□□□□□ -1.28
USP9X-208ENST00000487625 B8ZZF3 427 aa7.02□□□□□ -1.29
USP9X-208ENST00000487625 EIF2AK2P19525 551 aaKnown RBP7.02□□□□□ -1.29
USP9X-208ENST00000487625 GTF2IP78347 998 aa7.02□□□□□ -1.29
USP9X-208ENST00000487625 KRTAP19-4Q3LI73 84 aa7.02□□□□□ -1.29
USP9X-208ENST00000487625 GDF6Q6KF10 455 aaPredicted RBP7.02□□□□□ -1.29
USP9X-208ENST00000487625 ACAD11Q709F0 780 aa7.02□□□□□ -1.29
USP9X-208ENST00000487625 KRT25Q7Z3Z0 450 aa7.02□□□□□ -1.29
USP9X-208ENST00000487625 GALNT11Q8NCW6 608 aa7.02□□□□□ -1.29
USP9X-208ENST00000487625 BANK1Q8NDB2 785 aa7.02□□□□□ -1.29
USP9X-208ENST00000487625 COL26A1Q96A83 441 aa7.02□□□□□ -1.29
USP9X-208ENST00000487625 TSPAN10Q9H1Z9 355 aaPredicted RBP7.02□□□□□ -1.29
USP9X-208ENST00000487625 CARMIL2Q6F5E8 1435 aa7.01□□□□□ -1.29
USP9X-208ENST00000487625 PLD4Q96BZ4 506 aa7.01□□□□□ -1.29
USP9X-208ENST00000487625 SNRKQ9NRH2 765 aa7.01□□□□□ -1.29
USP9X-208ENST00000487625 PSME1Q06323 249 aa7□□□□□ -1.29
USP9X-208ENST00000487625 IRF5Q13568 498 aa7□□□□□ -1.29
USP9X-208ENST00000487625 BEND4Q6ZU67 534 aa7□□□□□ -1.29
USP9X-208ENST00000487625 IFT43Q96FT9 208 aa7□□□□□ -1.29
USP9X-208ENST00000487625 MFSD14AQ96MC6 490 aa7□□□□□ -1.29
USP9X-208ENST00000487625 FOSL1P15407 271 aa6.99□□□□□ -1.29
USP9X-208ENST00000487625 TARSP26639 723 aaKnown RBP6.99□□□□□ -1.29
USP9X-208ENST00000487625 PKN1Q16512 942 aa6.99□□□□□ -1.29
USP9X-208ENST00000487625 IER5Q5VY09 327 aa6.99□□□□□ -1.29
USP9X-208ENST00000487625 KCNK4Q9NYG8 393 aa6.99□□□□□ -1.29
USP9X-208ENST00000487625 DMGDHQ9UI17 866 aaKnown RBP6.99□□□□□ -1.29
USP9X-208ENST00000487625 TBC1D2BQ9UPU7 963 aa6.99□□□□□ -1.29
USP9X-208ENST00000487625 FARP2O94887 1054 aaPredicted RBP6.98□□□□□ -1.29
USP9X-208ENST00000487625 NRLP54845 237 aa6.98□□□□□ -1.29
USP9X-208ENST00000487625 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.98□□□□□ -1.29
USP9X-208ENST00000487625 KIAA1211Q6ZU35 1233 aa6.98□□□□□ -1.29
USP9X-208ENST00000487625 ALDH16A1Q8IZ83 802 aa6.98□□□□□ -1.29
USP9X-208ENST00000487625 APBB1O00213 710 aa6.97□□□□□ -1.29
USP9X-208ENST00000487625 TM4SF5O14894 197 aa6.97□□□□□ -1.29
USP9X-208ENST00000487625 RARAP10276 462 aa6.97□□□□□ -1.29
USP9X-208ENST00000487625 BMP3P12645 472 aa6.97□□□□□ -1.29
USP9X-208ENST00000487625 CILP2Q8IUL8 1156 aa6.97□□□□□ -1.29
USP9X-208ENST00000487625 KCNF1Q9H3M0 494 aa6.97□□□□□ -1.29
USP9X-208ENST00000487625 JAG2Q9Y219 1238 aa6.97□□□□□ -1.29
USP9X-208ENST00000487625 LEMD3Q9Y2U8 911 aa6.97□□□□□ -1.29
USP9X-208ENST00000487625 CHMP3Q9Y3E7 222 aa6.97□□□□□ -1.29
USP9X-208ENST00000487625 PIK3CDO00329 1044 aa6.96□□□□□ -1.3
USP9X-208ENST00000487625 VAC14Q08AM6 782 aa6.96□□□□□ -1.3
USP9X-208ENST00000487625 HIF1AQ16665 826 aa6.96□□□□□ -1.3
USP9X-208ENST00000487625 EML3Q32P44 896 aa6.96□□□□□ -1.3
USP9X-208ENST00000487625 PAK6Q9NQU5 681 aaPredicted RBP6.96□□□□□ -1.3
USP9X-208ENST00000487625 NOD1Q9Y239 953 aa6.96□□□□□ -1.3
USP9X-208ENST00000487625 BCS1LQ9Y276 419 aa6.96□□□□□ -1.3
USP9X-208ENST00000487625 J3QW42 95 aa6.95□□□□□ -1.3
USP9X-208ENST00000487625 F13BP05160 661 aa6.95□□□□□ -1.3
USP9X-208ENST00000487625 CD68P34810 354 aaPredicted RBP6.95□□□□□ -1.3
USP9X-208ENST00000487625 TRIM33Q9UPN9 1127 aa6.95□□□□□ -1.3
USP9X-208ENST00000487625 TGFBR3LH3BV60 316 aa6.94□□□□□ -1.3
USP9X-208ENST00000487625 SASH3O75995 380 aa6.94□□□□□ -1.3
USP9X-208ENST00000487625 TMEM132AQ24JP5 1023 aa6.94□□□□□ -1.3
USP9X-208ENST00000487625 FLCNQ8NFG4 579 aa6.94□□□□□ -1.3
USP9X-208ENST00000487625 ATG3Q9NT62 314 aa6.94□□□□□ -1.3
USP9X-208ENST00000487625 PREPP48147 710 aa6.93□□□□□ -1.3
USP9X-208ENST00000487625 KSR1Q8IVT5 923 aa6.93□□□□□ -1.3
USP9X-208ENST00000487625 AGBL5Q8NDL9 886 aa6.93□□□□□ -1.3
USP9X-208ENST00000487625 LINC01387J3KSC0 135 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms