RNA–Protein interactions for RNA: ENST00000487462.1

CDK11A-217, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 5

Gene CDK11A, Length 437 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-217ENST00000487462 PDCD7Q8N8D1 485 aaKnown RBP13.09□□□□□ -0.31
CDK11A-217ENST00000487462 ZNF408Q9H9D4 720 aa13.09□□□□□ -0.31
CDK11A-217ENST00000487462 LGR6Q9HBX8 967 aa13.09□□□□□ -0.31
CDK11A-217ENST00000487462 CAMTA2O94983 1202 aa13.08□□□□□ -0.32
CDK11A-217ENST00000487462 AKAP4Q5JQC9 854 aa13.08□□□□□ -0.32
CDK11A-217ENST00000487462 ADARB2Q9NS39 739 aaKnown RBP13.08□□□□□ -0.32
CDK11A-217ENST00000487462 GPRC5DQ9NZD1 345 aa13.08□□□□□ -0.32
CDK11A-217ENST00000487462 PGAP2Q9UHJ9 254 aa13.08□□□□□ -0.32
CDK11A-217ENST00000487462 TRIOBPQ9H2D6 2365 aa13.08□□□□□ -0.32
CDK11A-217ENST00000487462 SLC24A1O60721 1099 aa13.07□□□□□ -0.32
CDK11A-217ENST00000487462 HUNKP57058 714 aa13.07□□□□□ -0.32
CDK11A-217ENST00000487462 KIF23Q02241 960 aaPredicted RBP13.06□□□□□ -0.32
CDK11A-217ENST00000487462 ZNF330Q9Y3S2 320 aaPredicted RBP13.06□□□□□ -0.32
CDK11A-217ENST00000487462 GTPBP6O43824 516 aaPredicted RBP13.05□□□□□ -0.32
CDK11A-217ENST00000487462 STARD3NLO95772 234 aa13.05□□□□□ -0.32
CDK11A-217ENST00000487462 NBPF5PQ86XG9 351 aaPredicted RBP13.05□□□□□ -0.32
CDK11A-217ENST00000487462 CEP290O15078 2479 aa13.05□□□□□ -0.32
CDK11A-217ENST00000487462 RNMTO43148 476 aaKnown RBP13.04□□□□□ -0.32
CDK11A-217ENST00000487462 TNNT2P45379 298 aaPredicted RBP13.04□□□□□ -0.32
CDK11A-217ENST00000487462 HIRAP54198 1017 aaPredicted RBP13.04□□□□□ -0.32
CDK11A-217ENST00000487462 PKN2Q16513 984 aaKnown RBP13.04□□□□□ -0.32
CDK11A-217ENST00000487462 RGMBQ6NW40 437 aa13.04□□□□□ -0.32
CDK11A-217ENST00000487462 DLK2Q6UY11 383 aa13.04□□□□□ -0.32
CDK11A-217ENST00000487462 SLC51AQ86UW1 340 aa13.04□□□□□ -0.32
CDK11A-217ENST00000487462 MS4A4AQ96JQ5 239 aa13.04□□□□□ -0.32
CDK11A-217ENST00000487462 RBBP6Q7Z6E9 1792 aaKnown RBP13.04□□□□□ -0.32
CDK11A-217ENST00000487462 POLR2AP24928 1970 aaKnown RBP13.03□□□□□ -0.32
CDK11A-217ENST00000487462 POTEFA5A3E0 1075 aa13.03□□□□□ -0.32
CDK11A-217ENST00000487462 IL6STP40189 918 aaPredicted RBP13.03□□□□□ -0.32
CDK11A-217ENST00000487462 LARGE2Q8N3Y3 721 aa13.03□□□□□ -0.32
CDK11A-217ENST00000487462 CDC37L1Q7L3B6 337 aa13.02□□□□□ -0.33
CDK11A-217ENST00000487462 ZC3H15Q8WU90 426 aaKnown RBP13.02□□□□□ -0.33
CDK11A-217ENST00000487462 CSRNP1Q96S65 589 aa13.02□□□□□ -0.33
CDK11A-217ENST00000487462 SIPA1L3O60292 1781 aaPredicted RBP13.02□□□□□ -0.33
CDK11A-217ENST00000487462 PAPPA2Q9BXP8 1791 aa13.02□□□□□ -0.33
CDK11A-217ENST00000487462 ALDH1B1P30837 517 aa13.01□□□□□ -0.33
CDK11A-217ENST00000487462 GMPSP49915 693 aaPredicted RBP13.01□□□□□ -0.33
CDK11A-217ENST00000487462 SULT6B1Q6IMI4 303 aa13.01□□□□□ -0.33
CDK11A-217ENST00000487462 MAMSTRQ6ZN01 415 aa13.01□□□□□ -0.33
CDK11A-217ENST00000487462 TRPM4Q8TD43 1214 aa13.01□□□□□ -0.33
CDK11A-217ENST00000487462 CCDC102AQ96A19 550 aa13.01□□□□□ -0.33
CDK11A-217ENST00000487462 BOLA1Q9Y3E2 137 aa13.01□□□□□ -0.33
CDK11A-217ENST00000487462 NPC1L1Q9UHC9 1359 aa13.01□□□□□ -0.33
CDK11A-217ENST00000487462 UNC80Q8N2C7 3258 aa13.01□□□□□ -0.33
CDK11A-217ENST00000487462 HEG1Q9ULI3 1381 aa13□□□□□ -0.33
CDK11A-217ENST00000487462 SLC10A3P09131 477 aa13□□□□□ -0.33
CDK11A-217ENST00000487462 USP48Q86UV5 1035 aa13□□□□□ -0.33
CDK11A-217ENST00000487462 NIM1KQ8IY84 436 aa13□□□□□ -0.33
CDK11A-217ENST00000487462 ZNF496Q96IT1 587 aaPredicted RBP13□□□□□ -0.33
CDK11A-217ENST00000487462 KIAA0100Q14667 2235 aaKnown RBP13□□□□□ -0.33
CDK11A-217ENST00000487462 A1BGP04217 495 aa12.99□□□□□ -0.33
CDK11A-217ENST00000487462 ZNF157P51786 506 aaPredicted RBP12.99□□□□□ -0.33
CDK11A-217ENST00000487462 CXCL9Q07325 125 aa12.99□□□□□ -0.33
CDK11A-217ENST00000487462 CRY2Q49AN0 593 aa12.99□□□□□ -0.33
CDK11A-217ENST00000487462 CC2D2BQ6DHV5 1058 aa12.99□□□□□ -0.33
CDK11A-217ENST00000487462 DZIP3Q86Y13 1208 aaKnown RBP12.99□□□□□ -0.33
CDK11A-217ENST00000487462 ZNF296Q8WUU4 475 aaPredicted RBP12.99□□□□□ -0.33
CDK11A-217ENST00000487462 LAMA3Q16787 3333 aa12.98□□□□□ -0.33
CDK11A-217ENST00000487462 CDHR2Q9BYE9 1310 aa12.98□□□□□ -0.33
CDK11A-217ENST00000487462 SHTN1A0MZ66 631 aa12.98□□□□□ -0.33
CDK11A-217ENST00000487462 PLCB2Q00722 1185 aa12.98□□□□□ -0.33
CDK11A-217ENST00000487462 FBXO46Q6PJ61 603 aaPredicted RBP12.98□□□□□ -0.33
CDK11A-217ENST00000487462 CLEC4GQ6UXB4 293 aa12.98□□□□□ -0.33
CDK11A-217ENST00000487462 C3orf67Q6ZVT6 689 aa12.98□□□□□ -0.33
CDK11A-217ENST00000487462 SLC17A8Q8NDX2 589 aa12.98□□□□□ -0.33
CDK11A-217ENST00000487462 GBA2Q9HCG7 927 aaPredicted RBP12.98□□□□□ -0.33
CDK11A-217ENST00000487462 ABCC12Q96J65 1359 aa12.97□□□□□ -0.33
CDK11A-217ENST00000487462 AOC3Q16853 763 aa12.97□□□□□ -0.33
CDK11A-217ENST00000487462 TPTE2Q6XPS3 522 aa12.97□□□□□ -0.33
CDK11A-217ENST00000487462 TTC5Q8N0Z6 440 aa12.97□□□□□ -0.33
CDK11A-217ENST00000487462 SCUBE2Q9NQ36 999 aa12.97□□□□□ -0.33
CDK11A-217ENST00000487462 HDAC9Q9UKV0 1011 aa12.97□□□□□ -0.33
CDK11A-217ENST00000487462 RIC1Q4ADV7 1423 aa12.96□□□□□ -0.33
CDK11A-217ENST00000487462 PPIP5K2O43314 1243 aa12.96□□□□□ -0.33
CDK11A-217ENST00000487462 TEX13AQ9BXU3 409 aaPredicted RBP12.96□□□□□ -0.33
CDK11A-217ENST00000487462 PIP4K2AP48426 406 aaPredicted RBP12.95□□□□□ -0.34
CDK11A-217ENST00000487462 GRIPAP1Q4V328 841 aa12.95□□□□□ -0.34
CDK11A-217ENST00000487462 CDCA8Q53HL2 280 aa12.95□□□□□ -0.34
CDK11A-217ENST00000487462 C2orf69Q8N8R5 385 aa12.95□□□□□ -0.34
CDK11A-217ENST00000487462 ZNRF3Q9ULT6 936 aa12.95□□□□□ -0.34
CDK11A-217ENST00000487462 FAM177BA6PVY3 158 aa12.94□□□□□ -0.34
CDK11A-217ENST00000487462 LHX8Q68G74 356 aa12.94□□□□□ -0.34
CDK11A-217ENST00000487462 ZNF790Q6PG37 636 aa12.94□□□□□ -0.34
CDK11A-217ENST00000487462 KRT26Q7Z3Y9 468 aa12.94□□□□□ -0.34
CDK11A-217ENST00000487462 RASAL3Q86YV0 1011 aa12.94□□□□□ -0.34
CDK11A-217ENST00000487462 MICALL2Q8IY33 904 aa12.94□□□□□ -0.34
CDK11A-217ENST00000487462 NIP7Q9Y221 180 aaKnown RBP eCLIP12.94□□□□□ -0.34
CDK11A-217ENST00000487462 ZNF652Q9Y2D9 606 aa12.94□□□□□ -0.34
CDK11A-217ENST00000487462 ADM5C9JUS6 153 aa12.93□□□□□ -0.34
CDK11A-217ENST00000487462 TBC1D8O95759 1140 aa12.93□□□□□ -0.34
CDK11A-217ENST00000487462 HOXA10P31260 410 aaPredicted RBP12.93□□□□□ -0.34
CDK11A-217ENST00000487462 IL13P35225 146 aa12.93□□□□□ -0.34
CDK11A-217ENST00000487462 NPM2Q86SE8 214 aaKnown RBP12.93□□□□□ -0.34
CDK11A-217ENST00000487462 KIF7Q2M1P5 1343 aa12.92□□□□□ -0.34
CDK11A-217ENST00000487462 PPP1R37O75864 691 aa12.92□□□□□ -0.34
CDK11A-217ENST00000487462 EGFRP00533 1210 aa12.92□□□□□ -0.34
CDK11A-217ENST00000487462 MTHFSDQ2M296 383 aaKnown RBP12.92□□□□□ -0.34
CDK11A-217ENST00000487462 NOM1Q5C9Z4 860 aaKnown RBP12.92□□□□□ -0.34
CDK11A-217ENST00000487462 BCL2L13Q9BXK5 485 aa12.92□□□□□ -0.34
CDK11A-217ENST00000487462 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms