RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 ZNRF3Q9ULT6 936 aa15.84■□□□□ 0.13
VPS16-208ENST00000487461 GNAI1P63096 354 aa15.83■□□□□ 0.12
VPS16-208ENST00000487461 CXCL9Q07325 125 aa15.83■□□□□ 0.12
VPS16-208ENST00000487461 TRIM28Q13263 835 aaKnown RBP15.83■□□□□ 0.12
VPS16-208ENST00000487461 PHAXQ9H814 394 aaKnown RBP15.83■□□□□ 0.12
VPS16-208ENST00000487461 CNTNAP1P78357 1384 aa15.83■□□□□ 0.12
VPS16-208ENST00000487461 ADAMTSL1Q8N6G6 1762 aa15.82■□□□□ 0.12
VPS16-208ENST00000487461 VEGFBP49765 207 aa15.82■□□□□ 0.12
VPS16-208ENST00000487461 KIAA2012Q0VF49 1180 aa15.82■□□□□ 0.12
VPS16-208ENST00000487461 SF3B3Q15393 1217 aaKnown RBP15.82■□□□□ 0.12
VPS16-208ENST00000487461 CCDC184Q52MB2 194 aa15.82■□□□□ 0.12
VPS16-208ENST00000487461 RTL5Q5HYW3 569 aaPredicted RBP15.82■□□□□ 0.12
VPS16-208ENST00000487461 C8orf58Q8NAV2 365 aa15.82■□□□□ 0.12
VPS16-208ENST00000487461 ANKRD36CQ5JPF3 1778 aa15.82■□□□□ 0.12
VPS16-208ENST00000487461 CALD1Q05682 793 aaKnown RBP15.81■□□□□ 0.12
VPS16-208ENST00000487461 FMR1Q06787 632 aaKnown RBP eCLIP15.81■□□□□ 0.12
VPS16-208ENST00000487461 LTBP1Q14766 1721 aa15.81■□□□□ 0.12
VPS16-208ENST00000487461 USP50Q70EL3 339 aaPredicted RBP15.81■□□□□ 0.12
VPS16-208ENST00000487461 RIC3Q7Z5B4 369 aa15.81■□□□□ 0.12
VPS16-208ENST00000487461 CELF1Q92879 486 aaKnown RBP15.81■□□□□ 0.12
VPS16-208ENST00000487461 LAMB2P55268 1798 aa15.8■□□□□ 0.12
VPS16-208ENST00000487461 IRS4O14654 1257 aaPredicted RBP15.8■□□□□ 0.12
VPS16-208ENST00000487461 TMC4Q7Z404 712 aa15.8■□□□□ 0.12
VPS16-208ENST00000487461 GPRC5DQ9NZD1 345 aa15.8■□□□□ 0.12
VPS16-208ENST00000487461 RAD17O75943 681 aa15.79■□□□□ 0.12
VPS16-208ENST00000487461 GMPSP49915 693 aaPredicted RBP15.79■□□□□ 0.12
VPS16-208ENST00000487461 GOLGA2Q08379 1002 aa15.79■□□□□ 0.12
VPS16-208ENST00000487461 CIAPIN1Q6FI81 312 aa15.79■□□□□ 0.12
VPS16-208ENST00000487461 ADARB2Q9NS39 739 aaKnown RBP15.79■□□□□ 0.12
VPS16-208ENST00000487461 TAF1P21675 1872 aa15.78■□□□□ 0.12
VPS16-208ENST00000487461 RASSF10A6NK89 507 aa15.78■□□□□ 0.12
VPS16-208ENST00000487461 YDJCA8MPS7 323 aa15.78■□□□□ 0.12
VPS16-208ENST00000487461 GPSM2P81274 684 aa15.78■□□□□ 0.12
VPS16-208ENST00000487461 DEFB115Q30KQ5 88 aa15.78■□□□□ 0.12
VPS16-208ENST00000487461 TNS4Q8IZW8 715 aa15.78■□□□□ 0.12
VPS16-208ENST00000487461 TSPYL6Q8N831 410 aa15.78■□□□□ 0.12
VPS16-208ENST00000487461 ZBTB38Q8NAP3 1195 aaPredicted RBP15.78■□□□□ 0.12
VPS16-208ENST00000487461 MYD88Q99836 296 aa15.78■□□□□ 0.12
VPS16-208ENST00000487461 NSFL1CQ9UNZ2 370 aaKnown RBP15.78■□□□□ 0.12
VPS16-208ENST00000487461 TRAF5O00463 557 aa15.77■□□□□ 0.12
VPS16-208ENST00000487461 RPS8P62241 208 aaKnown RBP15.77■□□□□ 0.12
VPS16-208ENST00000487461 TNIP1Q15025 636 aa15.77■□□□□ 0.12
VPS16-208ENST00000487461 WASHC4Q2M389 1173 aa15.77■□□□□ 0.12
VPS16-208ENST00000487461 JARID2Q92833 1246 aaPredicted RBP15.77■□□□□ 0.12
VPS16-208ENST00000487461 POLLQ9UGP5 575 aa15.77■□□□□ 0.12
VPS16-208ENST00000487461 RIMBP2O15034 1052 aa15.76■□□□□ 0.11
VPS16-208ENST00000487461 FOXN1O15353 648 aa15.76■□□□□ 0.11
VPS16-208ENST00000487461 HIRAP54198 1017 aaPredicted RBP15.76■□□□□ 0.11
VPS16-208ENST00000487461 CCDC30Q5VVM6 783 aa15.76■□□□□ 0.11
VPS16-208ENST00000487461 CST9Q5W186 159 aa15.76■□□□□ 0.11
VPS16-208ENST00000487461 CCDC191Q8NCU4 936 aa15.76■□□□□ 0.11
VPS16-208ENST00000487461 BCL2L13Q9BXK5 485 aa15.76■□□□□ 0.11
VPS16-208ENST00000487461 SEC31BQ9NQW1 1179 aa15.76■□□□□ 0.11
VPS16-208ENST00000487461 ABT1Q9ULW3 272 aaKnown RBP15.76■□□□□ 0.11
VPS16-208ENST00000487461 DDX60Q8IY21 1712 aaKnown RBP15.76■□□□□ 0.11
VPS16-208ENST00000487461 SHTN1A0MZ66 631 aa15.75■□□□□ 0.11
VPS16-208ENST00000487461 C6orf229H3BNL8 230 aa15.75■□□□□ 0.11
VPS16-208ENST00000487461 PCCAP05165 728 aaPredicted RBP15.75■□□□□ 0.11
VPS16-208ENST00000487461 TSR2Q969E8 191 aaKnown RBP15.75■□□□□ 0.11
VPS16-208ENST00000487461 METTL22Q9BUU2 404 aaPredicted RBP15.75■□□□□ 0.11
VPS16-208ENST00000487461 PGAP2Q9UHJ9 254 aa15.75■□□□□ 0.11
VPS16-208ENST00000487461 CNOT7Q9UIV1 285 aaKnown RBP15.75■□□□□ 0.11
VPS16-208ENST00000487461 COL4A1P02462 1669 aa15.75■□□□□ 0.11
VPS16-208ENST00000487461 DUOX1Q9NRD9 1551 aa15.75■□□□□ 0.11
VPS16-208ENST00000487461 GPR101Q96P66 508 aaPredicted RBP15.74■□□□□ 0.11
VPS16-208ENST00000487461 DBNDD1Q9H9R9 158 aa15.74■□□□□ 0.11
VPS16-208ENST00000487461 KCNQ5Q9NR82 932 aa15.74■□□□□ 0.11
VPS16-208ENST00000487461 WBP1LQ9NX94 342 aa15.74■□□□□ 0.11
VPS16-208ENST00000487461 CWC25Q9NXE8 425 aaPredicted RBP15.74■□□□□ 0.11
VPS16-208ENST00000487461 ZBTB12Q9Y330 459 aaPredicted RBP15.74■□□□□ 0.11
VPS16-208ENST00000487461 WDR33Q9C0J8 1336 aaKnown RBP15.73■□□□□ 0.11
VPS16-208ENST00000487461 PSMD14O00487 310 aa15.73■□□□□ 0.11
VPS16-208ENST00000487461 CAPN15O75808 1086 aa15.73■□□□□ 0.11
VPS16-208ENST00000487461 DOK7Q18PE1 504 aa15.73■□□□□ 0.11
VPS16-208ENST00000487461 CCDC27Q2M243 656 aa15.73■□□□□ 0.11
VPS16-208ENST00000487461 WWC1Q8IX03 1113 aa15.73■□□□□ 0.11
VPS16-208ENST00000487461 TBC1D16Q8TBP0 767 aa15.73■□□□□ 0.11
VPS16-208ENST00000487461 TRPM4Q8TD43 1214 aa15.73■□□□□ 0.11
VPS16-208ENST00000487461 CHMP4AQ9BY43 222 aa15.73■□□□□ 0.11
VPS16-208ENST00000487461 MAP3K2Q9Y2U5 619 aa15.73■□□□□ 0.11
VPS16-208ENST00000487461 CDHR2Q9BYE9 1310 aa15.72■□□□□ 0.11
VPS16-208ENST00000487461 PDE8AO60658 829 aa15.72■□□□□ 0.11
VPS16-208ENST00000487461 DDX58O95786 925 aaKnown RBP15.72■□□□□ 0.11
VPS16-208ENST00000487461 HSP90B1P14625 803 aaKnown RBP15.72■□□□□ 0.11
VPS16-208ENST00000487461 KSR2Q6VAB6 950 aa15.72■□□□□ 0.11
VPS16-208ENST00000487461 ZC3H15Q8WU90 426 aaKnown RBP15.72■□□□□ 0.11
VPS16-208ENST00000487461 CCDC85AQ96PX6 553 aaPredicted RBP15.72■□□□□ 0.11
VPS16-208ENST00000487461 GLIS2Q9BZE0 524 aaPredicted RBP15.72■□□□□ 0.11
VPS16-208ENST00000487461 PI4KAP2A4QPH2 592 aa15.71■□□□□ 0.11
VPS16-208ENST00000487461 H7C1D1 291 aa15.71■□□□□ 0.11
VPS16-208ENST00000487461 ECE2O60344 883 aa15.71■□□□□ 0.11
VPS16-208ENST00000487461 IGKV5-2P06315 115 aa15.71■□□□□ 0.11
VPS16-208ENST00000487461 CTCFP49711 727 aaPredicted RBP15.71■□□□□ 0.11
VPS16-208ENST00000487461 CCDC152Q4G0S7 254 aa15.71■□□□□ 0.11
VPS16-208ENST00000487461 MICALL2Q8IY33 904 aa15.71■□□□□ 0.11
VPS16-208ENST00000487461 PI4KAP1Q8N8J0 262 aa15.71■□□□□ 0.11
VPS16-208ENST00000487461 DPF2Q92785 391 aa15.71■□□□□ 0.11
VPS16-208ENST00000487461 AIDAQ96BJ3 306 aa15.71■□□□□ 0.11
VPS16-208ENST00000487461 EYA3Q99504 573 aa15.71■□□□□ 0.11
VPS16-208ENST00000487461 PODXL2Q9NZ53 605 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms