RNA–Protein interactions for RNA: ENST00000487453.1

PRDM2-208, Transcript of PR/SET domain 2, humanhuman

TSL 3

Gene PRDM2, Length 646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-208ENST00000487453 MVPQ14764 893 aaKnown RBP16.03■□□□□ 0.16
PRDM2-208ENST00000487453 CCDC152Q4G0S7 254 aa16.03■□□□□ 0.16
PRDM2-208ENST00000487453 STYK1Q6J9G0 422 aa16.03■□□□□ 0.16
PRDM2-208ENST00000487453 RBM17Q96I25 401 aaKnown RBP16.03■□□□□ 0.16
PRDM2-208ENST00000487453 PIM2Q9P1W9 311 aa16.03■□□□□ 0.16
PRDM2-208ENST00000487453 CHMP3Q9Y3E7 222 aa16.03■□□□□ 0.16
PRDM2-208ENST00000487453 SUPT16HQ9Y5B9 1047 aaKnown RBP16.03■□□□□ 0.16
PRDM2-208ENST00000487453 TAF1P21675 1872 aa16.02■□□□□ 0.16
PRDM2-208ENST00000487453 CENPBP07199 599 aaPredicted RBP16.02■□□□□ 0.16
PRDM2-208ENST00000487453 KCNA3P22001 575 aa16.02■□□□□ 0.16
PRDM2-208ENST00000487453 DDX46Q7L014 1031 aaKnown RBP16.02■□□□□ 0.16
PRDM2-208ENST00000487453 PLA2G12BQ9BX93 195 aa16.02■□□□□ 0.16
PRDM2-208ENST00000487453 BICC1Q9H694 974 aaKnown RBP16.02■□□□□ 0.16
PRDM2-208ENST00000487453 BCS1LQ9Y276 419 aa16.02■□□□□ 0.16
PRDM2-208ENST00000487453 ARFGEF1Q9Y6D6 1849 aa16.02■□□□□ 0.16
PRDM2-208ENST00000487453 SRCAPQ6ZRS2 3230 aa16.02■□□□□ 0.16
PRDM2-208ENST00000487453 COL4A1P02462 1669 aa16.02■□□□□ 0.15
PRDM2-208ENST00000487453 FOXO4P98177 505 aa16.01■□□□□ 0.15
PRDM2-208ENST00000487453 SF3B3Q15393 1217 aaKnown RBP16.01■□□□□ 0.15
PRDM2-208ENST00000487453 DALRD3Q5D0E6 543 aaKnown RBP16.01■□□□□ 0.15
PRDM2-208ENST00000487453 PRPF40BQ6NWY9 871 aaKnown RBP16.01■□□□□ 0.15
PRDM2-208ENST00000487453 TTLL6Q8N841 843 aa16.01■□□□□ 0.15
PRDM2-208ENST00000487453 CNKSR1Q969H4 720 aa16.01■□□□□ 0.15
PRDM2-208ENST00000487453 DDX19BQ9UMR2 479 aa16.01■□□□□ 0.15
PRDM2-208ENST00000487453 HDAC5Q9UQL6 1122 aa16.01■□□□□ 0.15
PRDM2-208ENST00000487453 SLX4Q8IY92 1834 aa16.01■□□□□ 0.15
PRDM2-208ENST00000487453 ALDH1B1P30837 517 aa16■□□□□ 0.15
PRDM2-208ENST00000487453 FAM161AQ3B820 660 aa16■□□□□ 0.15
PRDM2-208ENST00000487453 EPHA10Q5JZY3 1008 aa16■□□□□ 0.15
PRDM2-208ENST00000487453 LMBR1LQ6UX01 489 aa16■□□□□ 0.15
PRDM2-208ENST00000487453 TTLL11Q8NHH1 800 aa16■□□□□ 0.15
PRDM2-208ENST00000487453 GREM2Q9H772 168 aa16■□□□□ 0.15
PRDM2-208ENST00000487453 ZNF219Q9P2Y4 722 aaPredicted RBP16■□□□□ 0.15
PRDM2-208ENST00000487453 LRRFIP2Q9Y608 721 aaKnown RBP16■□□□□ 0.15
PRDM2-208ENST00000487453 PPEF1O14829 653 aaPredicted RBP15.99■□□□□ 0.15
PRDM2-208ENST00000487453 HOXA10P31260 410 aaPredicted RBP15.99■□□□□ 0.15
PRDM2-208ENST00000487453 KAZALD1Q96I82 304 aa15.99■□□□□ 0.15
PRDM2-208ENST00000487453 CRAMP1Q96RY5 1269 aa15.99■□□□□ 0.15
PRDM2-208ENST00000487453 SEC31BQ9NQW1 1179 aa15.99■□□□□ 0.15
PRDM2-208ENST00000487453 LRRC37AA6NMS7 1700 aa15.99■□□□□ 0.15
PRDM2-208ENST00000487453 RTL9Q8NET4 1388 aa15.99■□□□□ 0.15
PRDM2-208ENST00000487453 GNAI2P04899 355 aa15.98■□□□□ 0.15
PRDM2-208ENST00000487453 ITGA6P23229 1130 aa15.98■□□□□ 0.15
PRDM2-208ENST00000487453 GRAPQ13588 217 aa15.98■□□□□ 0.15
PRDM2-208ENST00000487453 GPR162Q16538 588 aa15.98■□□□□ 0.15
PRDM2-208ENST00000487453 GRAPLQ8TC17 118 aaPredicted RBP15.98■□□□□ 0.15
PRDM2-208ENST00000487453 C1orf115Q9H7X2 142 aa15.98■□□□□ 0.15
PRDM2-208ENST00000487453 ZBTB7BO15156 539 aaPredicted RBP15.97■□□□□ 0.15
PRDM2-208ENST00000487453 CSF1RP07333 972 aa15.97■□□□□ 0.15
PRDM2-208ENST00000487453 IFIT5Q13325 482 aaKnown RBP15.97■□□□□ 0.15
PRDM2-208ENST00000487453 CCDC57Q2TAC2 916 aa15.97■□□□□ 0.15
PRDM2-208ENST00000487453 TAF7LQ5H9L4 462 aa15.97■□□□□ 0.15
PRDM2-208ENST00000487453 ANKRD44Q8N8A2 993 aa15.97■□□□□ 0.15
PRDM2-208ENST00000487453 CELF1Q92879 486 aaKnown RBP15.97■□□□□ 0.15
PRDM2-208ENST00000487453 CDC5LQ99459 802 aaKnown RBP15.97■□□□□ 0.15
PRDM2-208ENST00000487453 ANKRD18BA2A2Z9 1011 aa15.96■□□□□ 0.15
PRDM2-208ENST00000487453 DCAF8L1A6NGE4 600 aa15.96■□□□□ 0.15
PRDM2-208ENST00000487453 C21orf2O43822 256 aa15.96■□□□□ 0.15
PRDM2-208ENST00000487453 YBX3P16989 372 aaKnown RBP eCLIP15.96■□□□□ 0.15
PRDM2-208ENST00000487453 RABL6Q3YEC7 729 aaPredicted RBP15.96■□□□□ 0.15
PRDM2-208ENST00000487453 ANKRD18AQ8IVF6 992 aa15.96■□□□□ 0.15
PRDM2-208ENST00000487453 CHMP4BQ9H444 224 aaKnown RBP15.96■□□□□ 0.15
PRDM2-208ENST00000487453 CRBNQ96SW2 442 aa15.95■□□□□ 0.14
PRDM2-208ENST00000487453 TMX4Q9H1E5 349 aaPredicted RBP15.95■□□□□ 0.14
PRDM2-208ENST00000487453 IGHMBP2P38935 993 aaKnown RBP15.94■□□□□ 0.14
PRDM2-208ENST00000487453 A0A1B0GUL6 1792 aa15.94■□□□□ 0.14
PRDM2-208ENST00000487453 BBOX1O75936 387 aa15.93■□□□□ 0.14
PRDM2-208ENST00000487453 RPS8P62241 208 aaKnown RBP15.93■□□□□ 0.14
PRDM2-208ENST00000487453 IRX6P78412 446 aaPredicted RBP15.93■□□□□ 0.14
PRDM2-208ENST00000487453 CCDC93Q567U6 631 aa15.93■□□□□ 0.14
PRDM2-208ENST00000487453 OLFM4Q6UX06 510 aa15.93■□□□□ 0.14
PRDM2-208ENST00000487453 TMC4Q7Z404 712 aa15.93■□□□□ 0.14
PRDM2-208ENST00000487453 SLC51AQ86UW1 340 aa15.93■□□□□ 0.14
PRDM2-208ENST00000487453 MPHOSPH8Q99549 860 aa15.93■□□□□ 0.14
PRDM2-208ENST00000487453 SRGAP3O43295 1099 aa15.92■□□□□ 0.14
PRDM2-208ENST00000487453 SOGA3Q5TF21 947 aa15.92■□□□□ 0.14
PRDM2-208ENST00000487453 ZNF594Q96JF6 807 aaPredicted RBP15.92■□□□□ 0.14
PRDM2-208ENST00000487453 ZBTB40Q9NUA8 1239 aa15.92■□□□□ 0.14
PRDM2-208ENST00000487453 ATP6V0A2Q9Y487 856 aa15.92■□□□□ 0.14
PRDM2-208ENST00000487453 FER1L6Q2WGJ9 1857 aa15.92■□□□□ 0.14
PRDM2-208ENST00000487453 ARHGAP27Q6ZUM4 889 aa15.91■□□□□ 0.14
PRDM2-208ENST00000487453 KLHDC4Q8TBB5 520 aa15.91■□□□□ 0.14
PRDM2-208ENST00000487453 LTBP1Q14766 1721 aa15.91■□□□□ 0.14
PRDM2-208ENST00000487453 GRIN3BO60391 1043 aa15.9■□□□□ 0.14
PRDM2-208ENST00000487453 MTX1Q13505 466 aa15.9■□□□□ 0.14
PRDM2-208ENST00000487453 LDHAL6AQ6ZMR3 332 aa15.9■□□□□ 0.14
PRDM2-208ENST00000487453 SP8Q8IXZ3 490 aa15.9■□□□□ 0.14
PRDM2-208ENST00000487453 C7orf43Q8WVR3 580 aa15.9■□□□□ 0.14
PRDM2-208ENST00000487453 CNNM1Q9NRU3 951 aa15.9■□□□□ 0.14
PRDM2-208ENST00000487453 DUOX1Q9NRD9 1551 aa15.89■□□□□ 0.13
PRDM2-208ENST00000487453 PNMA6EA0A0J9YXQ4 647 aa15.89■□□□□ 0.13
PRDM2-208ENST00000487453 CC2D2BQ6DHV5 1058 aa15.89■□□□□ 0.13
PRDM2-208ENST00000487453 CEP85Q6P2H3 762 aa15.89■□□□□ 0.13
PRDM2-208ENST00000487453 SIL1Q9H173 461 aa15.89■□□□□ 0.13
PRDM2-208ENST00000487453 BSDC1Q9NW68 430 aaPredicted RBP15.89■□□□□ 0.13
PRDM2-208ENST00000487453 SNED1Q8TER0 1413 aa15.88■□□□□ 0.13
PRDM2-208ENST00000487453 RASSF7Q02833 373 aa15.88■□□□□ 0.13
PRDM2-208ENST00000487453 DPP8Q6V1X1 898 aaPredicted RBP15.88■□□□□ 0.13
PRDM2-208ENST00000487453 RTKN2Q8IZC4 609 aa15.88■□□□□ 0.13
PRDM2-208ENST00000487453 EXOC6Q8TAG9 804 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms