RNA–Protein interactions for RNA: ENST00000487201.1

RHBDF1-210, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 5

Gene RHBDF1, Length 1,708 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-210ENST00000487201 HSP90B1P14625 803 aaKnown RBP28.36■■■□□ 2.13
RHBDF1-210ENST00000487201 ALDH1B1P30837 517 aa28.36■■■□□ 2.13
RHBDF1-210ENST00000487201 CTSWP56202 376 aa28.36■■■□□ 2.13
RHBDF1-210ENST00000487201 C7orf43Q8WVR3 580 aa28.36■■■□□ 2.13
RHBDF1-210ENST00000487201 RBM17Q96I25 401 aaKnown RBP28.36■■■□□ 2.13
RHBDF1-210ENST00000487201 SLC51AQ86UW1 340 aa28.35■■■□□ 2.13
RHBDF1-210ENST00000487201 TTLL11Q8NHH1 800 aa28.35■■■□□ 2.13
RHBDF1-210ENST00000487201 RLBP1P12271 317 aa28.35■■■□□ 2.13
RHBDF1-210ENST00000487201 KAZALD1Q96I82 304 aa28.35■■■□□ 2.13
RHBDF1-210ENST00000487201 EPHA10Q5JZY3 1008 aa28.34■■■□□ 2.13
RHBDF1-210ENST00000487201 C21orf2O43822 256 aa28.33■■■□□ 2.13
RHBDF1-210ENST00000487201 GRIN3BO60391 1043 aa28.33■■■□□ 2.13
RHBDF1-210ENST00000487201 FOXO4P98177 505 aa28.33■■■□□ 2.13
RHBDF1-210ENST00000487201 CCDC85AQ96PX6 553 aaPredicted RBP28.33■■■□□ 2.13
RHBDF1-210ENST00000487201 FER1L6Q2WGJ9 1857 aa28.33■■■□□ 2.13
RHBDF1-210ENST00000487201 OLFM4Q6UX06 510 aa28.32■■■□□ 2.12
RHBDF1-210ENST00000487201 DDX46Q7L014 1031 aaKnown RBP28.32■■■□□ 2.12
RHBDF1-210ENST00000487201 DCAF8L1A6NGE4 600 aa28.32■■■□□ 2.12
RHBDF1-210ENST00000487201 CCDC152Q4G0S7 254 aa28.32■■■□□ 2.12
RHBDF1-210ENST00000487201 TMEM57Q8N5G2 664 aa28.32■■■□□ 2.12
RHBDF1-210ENST00000487201 SUCLG2Q96I99 432 aa28.32■■■□□ 2.12
RHBDF1-210ENST00000487201 SEC31BQ9NQW1 1179 aa28.32■■■□□ 2.12
RHBDF1-210ENST00000487201 ZNF219Q9P2Y4 722 aaPredicted RBP28.32■■■□□ 2.12
RHBDF1-210ENST00000487201 PLIN1O60240 522 aa28.31■■■□□ 2.12
RHBDF1-210ENST00000487201 CSF1RP07333 972 aa28.31■■■□□ 2.12
RHBDF1-210ENST00000487201 CELF1Q92879 486 aaKnown RBP28.31■■■□□ 2.12
RHBDF1-210ENST00000487201 GREM2Q9H772 168 aa28.31■■■□□ 2.12
RHBDF1-210ENST00000487201 GRAPQ13588 217 aa28.3■■■□□ 2.12
RHBDF1-210ENST00000487201 GRAPLQ8TC17 118 aaPredicted RBP28.3■■■□□ 2.12
RHBDF1-210ENST00000487201 SNED1Q8TER0 1413 aa28.3■■■□□ 2.12
RHBDF1-210ENST00000487201 DZIP1LQ8IYY4 767 aaKnown RBP28.29■■■□□ 2.12
RHBDF1-210ENST00000487201 RTL9Q8NET4 1388 aa28.29■■■□□ 2.12
RHBDF1-210ENST00000487201 CHD4Q14839 1912 aa28.29■■■□□ 2.12
RHBDF1-210ENST00000487201 PPEF1O14829 653 aaPredicted RBP28.28■■■□□ 2.12
RHBDF1-210ENST00000487201 MEIS3Q99687 375 aa28.28■■■□□ 2.12
RHBDF1-210ENST00000487201 LRRC37AA6NMS7 1700 aa28.27■■■□□ 2.12
RHBDF1-210ENST00000487201 SBF1O95248 1867 aa28.27■■■□□ 2.12
RHBDF1-210ENST00000487201 FAM161AQ3B820 660 aa28.27■■■□□ 2.12
RHBDF1-210ENST00000487201 FTSJ3Q8IY81 847 aaKnown RBP28.27■■■□□ 2.12
RHBDF1-210ENST00000487201 SPEF2Q9C093 1822 aa28.27■■■□□ 2.12
RHBDF1-210ENST00000487201 BBOX1O75936 387 aa28.26■■■□□ 2.12
RHBDF1-210ENST00000487201 ARHGAP27Q6ZUM4 889 aa28.26■■■□□ 2.12
RHBDF1-210ENST00000487201 PANK1Q8TE04 598 aa28.26■■■□□ 2.12
RHBDF1-210ENST00000487201 BICC1Q9H694 974 aaKnown RBP28.26■■■□□ 2.11
RHBDF1-210ENST00000487201 LMBR1LQ6UX01 489 aa28.25■■■□□ 2.11
RHBDF1-210ENST00000487201 ATP6V0A2Q9Y487 856 aa28.25■■■□□ 2.11
RHBDF1-210ENST00000487201 NFKBIEO00221 500 aa28.24■■■□□ 2.11
RHBDF1-210ENST00000487201 ANKRD44Q8N8A2 993 aa28.24■■■□□ 2.11
RHBDF1-210ENST00000487201 RPS8P62241 208 aaKnown RBP28.23■■■□□ 2.11
RHBDF1-210ENST00000487201 RABL6Q3YEC7 729 aaPredicted RBP28.23■■■□□ 2.11
RHBDF1-210ENST00000487201 CCDC88AQ3V6T2 1871 aa28.23■■■□□ 2.11
RHBDF1-210ENST00000487201 ITGA6P23229 1130 aa28.23■■■□□ 2.11
RHBDF1-210ENST00000487201 UBTFL1P0CB47 393 aaPredicted RBP28.22■■■□□ 2.11
RHBDF1-210ENST00000487201 PRELPP51888 382 aa28.22■■■□□ 2.11
RHBDF1-210ENST00000487201 RASSF7Q02833 373 aa28.22■■■□□ 2.11
RHBDF1-210ENST00000487201 SOGA3Q5TF21 947 aa28.22■■■□□ 2.11
RHBDF1-210ENST00000487201 CCDC93Q567U6 631 aa28.21■■■□□ 2.11
RHBDF1-210ENST00000487201 C20orf194Q5TEA3 1177 aa28.21■■■□□ 2.11
RHBDF1-210ENST00000487201 SP8Q8IXZ3 490 aa28.21■■■□□ 2.11
RHBDF1-210ENST00000487201 ITPRIPQ8IWB1 547 aa28.21■■■□□ 2.11
RHBDF1-210ENST00000487201 LTBP1Q14766 1721 aa28.2■■■□□ 2.11
RHBDF1-210ENST00000487201 LRRFIP2Q9Y608 721 aaKnown RBP28.2■■■□□ 2.1
RHBDF1-210ENST00000487201 TMC4Q7Z404 712 aa28.19■■■□□ 2.1
RHBDF1-210ENST00000487201 CDC5LQ99459 802 aaKnown RBP28.19■■■□□ 2.1
RHBDF1-210ENST00000487201 CHMP3Q9Y3E7 222 aa28.19■■■□□ 2.1
RHBDF1-210ENST00000487201 CC2D2BQ6DHV5 1058 aa28.18■■■□□ 2.1
RHBDF1-210ENST00000487201 ANKRD18AQ8IVF6 992 aa28.18■■■□□ 2.1
RHBDF1-210ENST00000487201 ZBTB7BO15156 539 aaPredicted RBP28.18■■■□□ 2.1
RHBDF1-210ENST00000487201 GNAI3P08754 354 aa28.18■■■□□ 2.1
RHBDF1-210ENST00000487201 RTKN2Q8IZC4 609 aa28.18■■■□□ 2.1
RHBDF1-210ENST00000487201 LTBP3Q9NS15 1303 aa28.17■■■□□ 2.1
RHBDF1-210ENST00000487201 DUOX1Q9NRD9 1551 aa28.17■■■□□ 2.1
RHBDF1-210ENST00000487201 MS4A1P11836 297 aa28.17■■■□□ 2.1
RHBDF1-210ENST00000487201 IFIT5Q13325 482 aaKnown RBP28.17■■■□□ 2.1
RHBDF1-210ENST00000487201 TAOK3Q9H2K8 898 aa28.17■■■□□ 2.1
RHBDF1-210ENST00000487201 ANKRD18BA2A2Z9 1011 aa28.15■■■□□ 2.1
RHBDF1-210ENST00000487201 PDE3AQ14432 1141 aa28.15■■■□□ 2.1
RHBDF1-210ENST00000487201 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.15■■■□□ 2.1
RHBDF1-210ENST00000487201 BSDC1Q9NW68 430 aaPredicted RBP28.15■■■□□ 2.1
RHBDF1-210ENST00000487201 RRP1P56182 461 aaKnown RBP28.15■■■□□ 2.1
RHBDF1-210ENST00000487201 FKBP4Q02790 459 aaKnown RBP eCLIP28.15■■■□□ 2.1
RHBDF1-210ENST00000487201 PSMD1Q99460 953 aa28.15■■■□□ 2.1
RHBDF1-210ENST00000487201 COG6Q9Y2V7 657 aa28.15■■■□□ 2.1
RHBDF1-210ENST00000487201 DICER1Q9UPY3 1922 aaKnown RBP28.14■■■□□ 2.1
RHBDF1-210ENST00000487201 MVPQ14764 893 aaKnown RBP28.14■■■□□ 2.1
RHBDF1-210ENST00000487201 CCDC57Q2TAC2 916 aa28.14■■■□□ 2.1
RHBDF1-210ENST00000487201 ZNF594Q96JF6 807 aaPredicted RBP28.14■■■□□ 2.1
RHBDF1-210ENST00000487201 A0A1B0GUL6 1792 aa28.13■■■□□ 2.09
RHBDF1-210ENST00000487201 GRIPAP1Q4V328 841 aa28.12■■■□□ 2.09
RHBDF1-210ENST00000487201 IGHMBP2P38935 993 aaKnown RBP28.12■■■□□ 2.09
RHBDF1-210ENST00000487201 GPSM2P81274 684 aa28.12■■■□□ 2.09
RHBDF1-210ENST00000487201 MINPP1Q9UNW1 487 aa28.12■■■□□ 2.09
RHBDF1-210ENST00000487201 GNAI2P04899 355 aa28.11■■■□□ 2.09
RHBDF1-210ENST00000487201 LMNB1P20700 586 aa28.11■■■□□ 2.09
RHBDF1-210ENST00000487201 RFX5P48382 616 aaPredicted RBP28.11■■■□□ 2.09
RHBDF1-210ENST00000487201 MPNDQ8N594 471 aa28.11■■■□□ 2.09
RHBDF1-210ENST00000487201 RTFDC1Q9BY42 306 aaPredicted RBP28.11■■■□□ 2.09
RHBDF1-210ENST00000487201 ZNF277Q9NRM2 450 aaPredicted RBP28.11■■■□□ 2.09
RHBDF1-210ENST00000487201 HDAC5Q9UQL6 1122 aa28.11■■■□□ 2.09
RHBDF1-210ENST00000487201 C9orf131Q5VYM1 1079 aa28.1■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms