RNA–Protein interactions for RNA: ENST00000486964.5

POLR1A-208, Transcript of RNA polymerase I subunit A, humanhuman

TSL 5

Gene POLR1A, Length 1,427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-208ENST00000486964 CASC1Q6TDU7 716 aa11.69□□□□□ -0.54
POLR1A-208ENST00000486964 FAM89AQ96GI7 184 aa11.69□□□□□ -0.54
POLR1A-208ENST00000486964 AK7Q96M32 723 aa11.69□□□□□ -0.54
POLR1A-208ENST00000486964 BCL2L12Q9HB09 334 aa11.69□□□□□ -0.54
POLR1A-208ENST00000486964 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.69□□□□□ -0.54
POLR1A-208ENST00000486964 COL5A3P25940 1745 aaPredicted RBP11.69□□□□□ -0.54
POLR1A-208ENST00000486964 BTAF1O14981 1849 aa11.69□□□□□ -0.54
POLR1A-208ENST00000486964 G3BP1Q13283 466 aaKnown RBP eCLIP11.69□□□□□ -0.543e-6■■■□□ 15.6
POLR1A-208ENST00000486964 RAB3GAP1Q15042 981 aa11.69□□□□□ -0.54
POLR1A-208ENST00000486964 PARP10Q53GL7 1025 aa11.69□□□□□ -0.54
POLR1A-208ENST00000486964 SLC27A3Q5K4L6 730 aa11.69□□□□□ -0.54
POLR1A-208ENST00000486964 SUSD4Q5VX71 490 aa11.69□□□□□ -0.54
POLR1A-208ENST00000486964 DEFB132Q7Z7B7 95 aa11.69□□□□□ -0.54
POLR1A-208ENST00000486964 SYNE4Q8N205 404 aa11.69□□□□□ -0.54
POLR1A-208ENST00000486964 PROM2Q8N271 834 aa11.69□□□□□ -0.54
POLR1A-208ENST00000486964 NARFQ9UHQ1 456 aa11.69□□□□□ -0.54
POLR1A-208ENST00000486964 SBF2Q86WG5 1849 aa11.68□□□□□ -0.54
POLR1A-208ENST00000486964 PLSCR1O15162 318 aa11.68□□□□□ -0.54
POLR1A-208ENST00000486964 GPTP24298 496 aa11.68□□□□□ -0.54
POLR1A-208ENST00000486964 RABEP1Q15276 862 aa11.68□□□□□ -0.54
POLR1A-208ENST00000486964 TBC1D9Q6ZT07 1266 aa11.68□□□□□ -0.54
POLR1A-208ENST00000486964 ATG9AQ7Z3C6 839 aa11.68□□□□□ -0.54
POLR1A-208ENST00000486964 AMIGO3Q86WK7 504 aa11.68□□□□□ -0.54
POLR1A-208ENST00000486964 TTLL11Q8NHH1 800 aa11.68□□□□□ -0.54
POLR1A-208ENST00000486964 KLHDC4Q8TBB5 520 aa11.68□□□□□ -0.54
POLR1A-208ENST00000486964 IL1RAPL2Q9NP60 686 aa11.68□□□□□ -0.54
POLR1A-208ENST00000486964 FBXO3Q9UK99 471 aa11.68□□□□□ -0.54
POLR1A-208ENST00000486964 KAT6BQ8WYB5 2073 aa11.67□□□□□ -0.54
POLR1A-208ENST00000486964 MX1P20591 662 aa11.67□□□□□ -0.54
POLR1A-208ENST00000486964 CLEC17AQ6ZS10 378 aa11.67□□□□□ -0.54
POLR1A-208ENST00000486964 PI4K2BQ8TCG2 481 aa11.67□□□□□ -0.54
POLR1A-208ENST00000486964 EAF2Q96CJ1 260 aaPredicted RBP11.67□□□□□ -0.54
POLR1A-208ENST00000486964 ARXQ96QS3 562 aa11.67□□□□□ -0.54
POLR1A-208ENST00000486964 TRMT112Q9UI30 125 aaKnown RBP11.67□□□□□ -0.54
POLR1A-208ENST00000486964 LY75O60449 1722 aa11.67□□□□□ -0.54
POLR1A-208ENST00000486964 IRS4O14654 1257 aaPredicted RBP11.66□□□□□ -0.54
POLR1A-208ENST00000486964 PDE8AO60658 829 aa11.66□□□□□ -0.54
POLR1A-208ENST00000486964 CIAO1O76071 339 aa11.66□□□□□ -0.54
POLR1A-208ENST00000486964 TRIM37O94972 964 aa11.66□□□□□ -0.54
POLR1A-208ENST00000486964 NTSR2O95665 410 aa11.66□□□□□ -0.54
POLR1A-208ENST00000486964 SDSP20132 328 aa11.66□□□□□ -0.54
POLR1A-208ENST00000486964 SLC10A5Q5PT55 438 aa11.66□□□□□ -0.54
POLR1A-208ENST00000486964 CLASRPQ8N2M8 674 aaKnown RBP11.66□□□□□ -0.54
POLR1A-208ENST00000486964 ARHGEF1Q92888 912 aaKnown RBP11.66□□□□□ -0.54
POLR1A-208ENST00000486964 UTP14AQ9BVJ6 771 aaKnown RBP11.66□□□□□ -0.54
POLR1A-208ENST00000486964 GPR108Q9NPR9 543 aa11.66□□□□□ -0.54
POLR1A-208ENST00000486964 EYA2O00167 538 aa11.65□□□□□ -0.54
POLR1A-208ENST00000486964 HMGB2P26583 209 aaKnown RBP11.65□□□□□ -0.54
POLR1A-208ENST00000486964 SF3B2Q13435 895 aaKnown RBP11.65□□□□□ -0.54
POLR1A-208ENST00000486964 NUTM1Q86Y26 1132 aa11.65□□□□□ -0.54
POLR1A-208ENST00000486964 ZNF652Q9Y2D9 606 aa11.65□□□□□ -0.54
POLR1A-208ENST00000486964 RTCBQ9Y3I0 505 aaKnown RBP11.65□□□□□ -0.54
POLR1A-208ENST00000486964 TTC41PQ6P2S7 1318 aa11.65□□□□□ -0.54
POLR1A-208ENST00000486964 GNPATO15228 680 aa11.64□□□□□ -0.55
POLR1A-208ENST00000486964 XRCC6P12956 609 aaKnown RBP eCLIP11.64□□□□□ -0.55
POLR1A-208ENST00000486964 IL15P40933 162 aaPredicted RBP11.64□□□□□ -0.55
POLR1A-208ENST00000486964 CTSWP56202 376 aa11.64□□□□□ -0.55
POLR1A-208ENST00000486964 SMIM5Q71RC9 77 aa11.64□□□□□ -0.55
POLR1A-208ENST00000486964 SPRYD3Q8NCJ5 442 aa11.64□□□□□ -0.55
POLR1A-208ENST00000486964 TNPO1Q92973 898 aaKnown RBP11.64□□□□□ -0.55
POLR1A-208ENST00000486964 GRPEL1Q9HAV7 217 aa11.64□□□□□ -0.55
POLR1A-208ENST00000486964 NIP7Q9Y221 180 aaKnown RBP eCLIP11.64□□□□□ -0.55
POLR1A-208ENST00000486964 SH3TC1Q8TE82 1336 aa11.64□□□□□ -0.55
POLR1A-208ENST00000486964 TNS1Q9HBL0 1735 aaKnown RBP11.64□□□□□ -0.55
POLR1A-208ENST00000486964 AFDNP55196 1824 aaKnown RBP11.64□□□□□ -0.55
POLR1A-208ENST00000486964 RTL9Q8NET4 1388 aa11.63□□□□□ -0.55
POLR1A-208ENST00000486964 DCAF8L1A6NGE4 600 aa11.63□□□□□ -0.55
POLR1A-208ENST00000486964 NUCB2P80303 420 aa11.63□□□□□ -0.55
POLR1A-208ENST00000486964 TFCP2Q12800 502 aa11.63□□□□□ -0.55
POLR1A-208ENST00000486964 OS9Q13438 667 aaPredicted RBP11.63□□□□□ -0.55
POLR1A-208ENST00000486964 TXNRD1Q16881 649 aa11.63□□□□□ -0.55
POLR1A-208ENST00000486964 TRAPPC3LQ5T215 181 aa11.63□□□□□ -0.55
POLR1A-208ENST00000486964 SIL1Q9H173 461 aa11.63□□□□□ -0.55
POLR1A-208ENST00000486964 RIPOR2Q9Y4F9 1068 aa11.63□□□□□ -0.55
POLR1A-208ENST00000486964 NUP98P52948 1817 aa11.63□□□□□ -0.55
POLR1A-208ENST00000486964 REC8O95072 547 aa11.62□□□□□ -0.55
POLR1A-208ENST00000486964 CCDC57Q2TAC2 916 aa11.62□□□□□ -0.55
POLR1A-208ENST00000486964 LRRC24Q50LG9 513 aa11.62□□□□□ -0.55
POLR1A-208ENST00000486964 TNNI3KQ59H18 835 aa11.62□□□□□ -0.55
POLR1A-208ENST00000486964 USPL1Q5W0Q7 1092 aa11.62□□□□□ -0.55
POLR1A-208ENST00000486964 TSHZ3Q63HK5 1081 aa11.62□□□□□ -0.55
POLR1A-208ENST00000486964 TBC1D9BQ66K14 1250 aa11.62□□□□□ -0.55
POLR1A-208ENST00000486964 ZNF594Q96JF6 807 aaPredicted RBP11.62□□□□□ -0.55
POLR1A-208ENST00000486964 KIF2CQ99661 725 aa11.62□□□□□ -0.55
POLR1A-208ENST00000486964 PUS3Q9BZE2 481 aaKnown RBP11.62□□□□□ -0.55
POLR1A-208ENST00000486964 CWC22Q9HCG8 908 aaKnown RBP11.62□□□□□ -0.55
POLR1A-208ENST00000486964 ECHDC1Q9NTX5 307 aa11.62□□□□□ -0.55
POLR1A-208ENST00000486964 SRP68Q9UHB9 627 aaKnown RBP11.62□□□□□ -0.55
POLR1A-208ENST00000486964 FPGT-TNNI3KV9GXZ4 949 aa11.62□□□□□ -0.55
POLR1A-208ENST00000486964 ST18O60284 1047 aa11.61□□□□□ -0.55
POLR1A-208ENST00000486964 GLRX3O76003 335 aaKnown RBP11.61□□□□□ -0.55
POLR1A-208ENST00000486964 IFIT2P09913 472 aaKnown RBP11.61□□□□□ -0.55
POLR1A-208ENST00000486964 HSP90B1P14625 803 aaKnown RBP11.61□□□□□ -0.55
POLR1A-208ENST00000486964 CLCN1P35523 988 aa11.61□□□□□ -0.55
POLR1A-208ENST00000486964 IFIT5Q13325 482 aaKnown RBP11.61□□□□□ -0.55
POLR1A-208ENST00000486964 SF3B3Q15393 1217 aaKnown RBP11.61□□□□□ -0.55
POLR1A-208ENST00000486964 AACSQ86V21 672 aa11.61□□□□□ -0.55
POLR1A-208ENST00000486964 ANP32BQ92688 251 aaKnown RBP11.61□□□□□ -0.55
POLR1A-208ENST00000486964 GREM2Q9H772 168 aa11.61□□□□□ -0.55
POLR1A-208ENST00000486964 ANO8Q9HCE9 1232 aaPredicted RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms