RNA–Protein interactions for RNA: ENST00000486867.1

SF1-216, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-216ENST00000486867 GRIPAP1Q4V328 841 aa16.73■□□□□ 0.27
SF1-216ENST00000486867 CCDC93Q567U6 631 aa16.73■□□□□ 0.27
SF1-216ENST00000486867 ARHGAP45Q92619 1136 aa16.73■□□□□ 0.27
SF1-216ENST00000486867 BCL2L13Q9BXK5 485 aa16.73■□□□□ 0.27
SF1-216ENST00000486867 UTYO14607 1347 aa16.72■□□□□ 0.27
SF1-216ENST00000486867 ZC3H4Q9UPT8 1303 aaKnown RBP16.72■□□□□ 0.27
SF1-216ENST00000486867 GRAPQ13588 217 aa16.72■□□□□ 0.27
SF1-216ENST00000486867 RTL5Q5HYW3 569 aaPredicted RBP16.72■□□□□ 0.27
SF1-216ENST00000486867 UBE3BQ7Z3V4 1068 aa16.72■□□□□ 0.27
SF1-216ENST00000486867 TMC4Q7Z404 712 aa16.72■□□□□ 0.27
SF1-216ENST00000486867 GRAPLQ8TC17 118 aaPredicted RBP16.72■□□□□ 0.27
SF1-216ENST00000486867 DUOX1Q9NRD9 1551 aa16.72■□□□□ 0.27
SF1-216ENST00000486867 KIF16BQ96L93 1317 aa16.71■□□□□ 0.27
SF1-216ENST00000486867 LMNB1P20700 586 aa16.71■□□□□ 0.27
SF1-216ENST00000486867 CTSWP56202 376 aa16.71■□□□□ 0.27
SF1-216ENST00000486867 RASSF7Q02833 373 aa16.71■□□□□ 0.27
SF1-216ENST00000486867 DDX46Q7L014 1031 aaKnown RBP16.71■□□□□ 0.27
SF1-216ENST00000486867 RTKN2Q8IZC4 609 aa16.71■□□□□ 0.27
SF1-216ENST00000486867 SRCIN1Q9C0H9 1055 aa16.71■□□□□ 0.27
SF1-216ENST00000486867 ATP6V0A2Q9Y487 856 aa16.71■□□□□ 0.27
SF1-216ENST00000486867 GRM8O00222 908 aa16.7■□□□□ 0.26
SF1-216ENST00000486867 PPEF1O14829 653 aaPredicted RBP16.7■□□□□ 0.26
SF1-216ENST00000486867 TTLL11Q8NHH1 800 aa16.7■□□□□ 0.26
SF1-216ENST00000486867 JARID2Q92833 1246 aaPredicted RBP16.7■□□□□ 0.26
SF1-216ENST00000486867 PSMD1Q99460 953 aa16.7■□□□□ 0.26
SF1-216ENST00000486867 TAOK3Q9H2K8 898 aa16.7■□□□□ 0.26
SF1-216ENST00000486867 CSF1RP07333 972 aa16.69■□□□□ 0.26
SF1-216ENST00000486867 FKBP4Q02790 459 aaKnown RBP eCLIP16.69■□□□□ 0.26
SF1-216ENST00000486867 CCDC152Q4G0S7 254 aa16.69■□□□□ 0.26
SF1-216ENST00000486867 C9orf131Q5VYM1 1079 aa16.69■□□□□ 0.26
SF1-216ENST00000486867 OLFM4Q6UX06 510 aa16.69■□□□□ 0.26
SF1-216ENST00000486867 SP8Q8IXZ3 490 aa16.69■□□□□ 0.26
SF1-216ENST00000486867 NOB1Q9ULX3 412 aaKnown RBP16.69■□□□□ 0.26
SF1-216ENST00000486867 SLC4A10Q6U841 1118 aa16.68■□□□□ 0.26
SF1-216ENST00000486867 CELF1Q92879 486 aaKnown RBP16.68■□□□□ 0.26
SF1-216ENST00000486867 RTFDC1Q9BY42 306 aaPredicted RBP16.68■□□□□ 0.26
SF1-216ENST00000486867 API5Q9BZZ5 524 aaKnown RBP16.68■□□□□ 0.26
SF1-216ENST00000486867 RPS8P62241 208 aaKnown RBP16.67■□□□□ 0.26
SF1-216ENST00000486867 FOXO4P98177 505 aa16.67■□□□□ 0.26
SF1-216ENST00000486867 ZNF784Q8NCA9 323 aaPredicted RBP16.67■□□□□ 0.26
SF1-216ENST00000486867 RNF181Q9P0P0 153 aa16.67■□□□□ 0.26
SF1-216ENST00000486867 ZNF219Q9P2Y4 722 aaPredicted RBP16.67■□□□□ 0.26
SF1-216ENST00000486867 PSME4Q14997 1843 aa16.67■□□□□ 0.26
SF1-216ENST00000486867 COL4A5P29400 1685 aa16.66■□□□□ 0.26
SF1-216ENST00000486867 SLC51AQ86UW1 340 aa16.66■□□□□ 0.26
SF1-216ENST00000486867 WDR90Q96KV7 1748 aa16.66■□□□□ 0.26
SF1-216ENST00000486867 SEC31BQ9NQW1 1179 aa16.66■□□□□ 0.26
SF1-216ENST00000486867 BCAR3O75815 825 aa16.65■□□□□ 0.26
SF1-216ENST00000486867 CCT4P50991 539 aaKnown RBP16.65■□□□□ 0.26
SF1-216ENST00000486867 INTS3Q68E01 1043 aaKnown RBP16.65■□□□□ 0.26
SF1-216ENST00000486867 KAZALD1Q96I82 304 aa16.65■□□□□ 0.26
SF1-216ENST00000486867 USP44Q9H0E7 712 aa16.65■□□□□ 0.26
SF1-216ENST00000486867 VPS33BQ9H267 617 aa16.65■□□□□ 0.26
SF1-216ENST00000486867 GREM2Q9H772 168 aa16.65■□□□□ 0.26
SF1-216ENST00000486867 IPO8O15397 1037 aaKnown RBP16.64■□□□□ 0.25
SF1-216ENST00000486867 NBPF7P0C2Y1 421 aaPredicted RBP16.64■□□□□ 0.25
SF1-216ENST00000486867 TRIM27P14373 513 aa16.64■□□□□ 0.25
SF1-216ENST00000486867 RABL6Q3YEC7 729 aaPredicted RBP16.64■□□□□ 0.25
SF1-216ENST00000486867 ATF7IPQ6VMQ6 1270 aa16.64■□□□□ 0.25
SF1-216ENST00000486867 C9orf78Q9NZ63 289 aaPredicted RBP16.64■□□□□ 0.25
SF1-216ENST00000486867 SCN4AP35499 1836 aa16.63■□□□□ 0.25
SF1-216ENST00000486867 EPHA10Q5JZY3 1008 aa16.63■□□□□ 0.25
SF1-216ENST00000486867 CDC5LQ99459 802 aaKnown RBP16.63■□□□□ 0.25
SF1-216ENST00000486867 PODXL2Q9NZ53 605 aa16.63■□□□□ 0.25
SF1-216ENST00000486867 ZNF646O15015 1829 aaPredicted RBP16.62■□□□□ 0.25
SF1-216ENST00000486867 IARSP41252 1262 aaKnown RBP16.62■□□□□ 0.25
SF1-216ENST00000486867 SUCLG2Q96I99 432 aa16.62■□□□□ 0.25
SF1-216ENST00000486867 SCN9AQ15858 1988 aa16.61■□□□□ 0.25
SF1-216ENST00000486867 ITGA6P23229 1130 aa16.61■□□□□ 0.25
SF1-216ENST00000486867 FAM161AQ3B820 660 aa16.61■□□□□ 0.25
SF1-216ENST00000486867 ANKRD18AQ8IVF6 992 aa16.61■□□□□ 0.25
SF1-216ENST00000486867 MPNDQ8N594 471 aa16.61■□□□□ 0.25
SF1-216ENST00000486867 SUPT20HQ8NEM7 779 aa16.61■□□□□ 0.25
SF1-216ENST00000486867 TMX4Q9H1E5 349 aaPredicted RBP16.61■□□□□ 0.25
SF1-216ENST00000486867 ZNF277Q9NRM2 450 aaPredicted RBP16.61■□□□□ 0.25
SF1-216ENST00000486867 BSDC1Q9NW68 430 aaPredicted RBP16.61■□□□□ 0.25
SF1-216ENST00000486867 LMBR1LQ6UX01 489 aa16.6■□□□□ 0.25
SF1-216ENST00000486867 DPP8Q6V1X1 898 aaPredicted RBP16.6■□□□□ 0.25
SF1-216ENST00000486867 ANKRD44Q8N8A2 993 aa16.6■□□□□ 0.25
SF1-216ENST00000486867 GLTPD2A6NH11 291 aa16.59■□□□□ 0.25
SF1-216ENST00000486867 FZD9O00144 591 aa16.59■□□□□ 0.25
SF1-216ENST00000486867 ZKSCAN2Q63HK3 967 aa16.59■□□□□ 0.25
SF1-216ENST00000486867 CCDC85AQ96PX6 553 aaPredicted RBP16.59■□□□□ 0.25
SF1-216ENST00000486867 GPSM2P81274 684 aa16.58■□□□□ 0.24
SF1-216ENST00000486867 KIAA2012Q0VF49 1180 aa16.58■□□□□ 0.24
SF1-216ENST00000486867 BICC1Q9H694 974 aaKnown RBP16.58■□□□□ 0.24
SF1-216ENST00000486867 TNNQ9UQP3 1299 aa16.58■□□□□ 0.24
SF1-216ENST00000486867 ANKRD18BA2A2Z9 1011 aa16.57■□□□□ 0.24
SF1-216ENST00000486867 IFIT5Q13325 482 aaKnown RBP16.57■□□□□ 0.24
SF1-216ENST00000486867 POLLQ9UGP5 575 aa16.57■□□□□ 0.24
SF1-216ENST00000486867 MINPP1Q9UNW1 487 aa16.57■□□□□ 0.24
SF1-216ENST00000486867 XDHP47989 1333 aa16.56■□□□□ 0.24
SF1-216ENST00000486867 KDM2BQ8NHM5 1336 aa16.56■□□□□ 0.24
SF1-216ENST00000486867 IGHMBP2P38935 993 aaKnown RBP16.56■□□□□ 0.24
SF1-216ENST00000486867 TBC1D16Q8TBP0 767 aa16.56■□□□□ 0.24
SF1-216ENST00000486867 FRAT1Q92837 279 aaPredicted RBP16.56■□□□□ 0.24
SF1-216ENST00000486867 NSFL1CQ9UNZ2 370 aaKnown RBP16.56■□□□□ 0.24
SF1-216ENST00000486867 MEIS3Q99687 375 aa16.55■□□□□ 0.24
SF1-216ENST00000486867 GPBP1L1Q9HC44 474 aaPredicted RBP16.55■□□□□ 0.24
SF1-216ENST00000486867 RCAN3Q9UKA8 241 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms