RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 MTX1Q13505 466 aa18.03■□□□□ 0.48
POLR2J3-204ENST00000486319 POLA2Q14181 598 aa18.03■□□□□ 0.48
POLR2J3-204ENST00000486319 PPP1R42Q7Z4L9 355 aa18.03■□□□□ 0.48
POLR2J3-204ENST00000486319 NRXN2Q9P2S2 1712 aa18.03■□□□□ 0.48
POLR2J3-204ENST00000486319 GCKRQ14397 625 aa18.03■□□□□ 0.48
POLR2J3-204ENST00000486319 BMP2KLQ5H9B9 411 aa18.03■□□□□ 0.48
POLR2J3-204ENST00000486319 ZNF34Q8IZ26 560 aa18.03■□□□□ 0.48
POLR2J3-204ENST00000486319 NYXQ9GZU5 481 aa18.03■□□□□ 0.48
POLR2J3-204ENST00000486319 SRGAP3O43295 1099 aa18.02■□□□□ 0.47
POLR2J3-204ENST00000486319 ZNF622Q969S3 477 aaKnown RBP eCLIP18.02■□□□□ 0.47
POLR2J3-204ENST00000486319 LRRCC1Q9C099 1032 aa18.02■□□□□ 0.47
POLR2J3-204ENST00000486319 RAB11FIP3O75154 756 aa18.01■□□□□ 0.47
POLR2J3-204ENST00000486319 HSP90AB3PQ58FF7 597 aa18.01■□□□□ 0.47
POLR2J3-204ENST00000486319 ARHGAP27Q6ZUM4 889 aa18.01■□□□□ 0.47
POLR2J3-204ENST00000486319 PLEKHM2Q8IWE5 1019 aa18.01■□□□□ 0.47
POLR2J3-204ENST00000486319 TTLL6Q8N841 843 aa18.01■□□□□ 0.47
POLR2J3-204ENST00000486319 EXOC6BQ9Y2D4 811 aa18.01■□□□□ 0.47
POLR2J3-204ENST00000486319 KIAA1551Q9HCM1 1747 aa18.01■□□□□ 0.47
POLR2J3-204ENST00000486319 UBN2Q6ZU65 1347 aa18.01■□□□□ 0.47
POLR2J3-204ENST00000486319 APBB1O00213 710 aa18■□□□□ 0.47
POLR2J3-204ENST00000486319 PARP10Q53GL7 1025 aa18■□□□□ 0.47
POLR2J3-204ENST00000486319 HSP90AB4PQ58FF6 505 aa18■□□□□ 0.47
POLR2J3-204ENST00000486319 SUSD4Q5VX71 490 aa18■□□□□ 0.47
POLR2J3-204ENST00000486319 TCIRG1Q13488 830 aa17.99■□□□□ 0.47
POLR2J3-204ENST00000486319 NUTM1Q86Y26 1132 aa17.99■□□□□ 0.47
POLR2J3-204ENST00000486319 SMARCA5O60264 1052 aaPredicted RBP17.98■□□□□ 0.47
POLR2J3-204ENST00000486319 SRGNP10124 158 aa17.98■□□□□ 0.47
POLR2J3-204ENST00000486319 SURF6O75683 361 aaKnown RBP17.98■□□□□ 0.47
POLR2J3-204ENST00000486319 ERFEQ4G0M1 354 aa17.98■□□□□ 0.47
POLR2J3-204ENST00000486319 MASTLQ96GX5 879 aa17.98■□□□□ 0.47
POLR2J3-204ENST00000486319 SUCLG2Q96I99 432 aa17.98■□□□□ 0.47
POLR2J3-204ENST00000486319 UPF2Q9HAU5 1272 aaKnown RBP17.98■□□□□ 0.47
POLR2J3-204ENST00000486319 KLRG2A4D1S0 409 aaPredicted RBP17.97■□□□□ 0.47
POLR2J3-204ENST00000486319 STYK1Q6J9G0 422 aa17.97■□□□□ 0.47
POLR2J3-204ENST00000486319 C16orf71Q8IYS4 520 aaPredicted RBP17.97■□□□□ 0.47
POLR2J3-204ENST00000486319 CNKSR1Q969H4 720 aa17.97■□□□□ 0.47
POLR2J3-204ENST00000486319 UTP14AQ9BVJ6 771 aaKnown RBP17.97■□□□□ 0.47
POLR2J3-204ENST00000486319 OSBPL3Q9H4L5 887 aa17.97■□□□□ 0.47
POLR2J3-204ENST00000486319 ANKRD36CQ5JPF3 1778 aa17.96■□□□□ 0.47
POLR2J3-204ENST00000486319 NTSR2O95665 410 aa17.96■□□□□ 0.47
POLR2J3-204ENST00000486319 TTC22Q5TAA0 569 aa17.96■□□□□ 0.47
POLR2J3-204ENST00000486319 BICC1Q9H694 974 aaKnown RBP17.96■□□□□ 0.47
POLR2J3-204ENST00000486319 NOP58Q9Y2X3 529 aaKnown RBP17.96■□□□□ 0.47
POLR2J3-204ENST00000486319 NPR1P16066 1061 aa17.95■□□□□ 0.46
POLR2J3-204ENST00000486319 NLRP10Q86W26 655 aa17.95■□□□□ 0.46
POLR2J3-204ENST00000486319 ZNF784Q8NCA9 323 aaPredicted RBP17.95■□□□□ 0.46
POLR2J3-204ENST00000486319 CCDC191Q8NCU4 936 aa17.95■□□□□ 0.46
POLR2J3-204ENST00000486319 KIF1BPQ96EK5 621 aa17.95■□□□□ 0.46
POLR2J3-204ENST00000486319 KAZALD1Q96I82 304 aa17.95■□□□□ 0.46
POLR2J3-204ENST00000486319 CWC25Q9NXE8 425 aaPredicted RBP17.95■□□□□ 0.46
POLR2J3-204ENST00000486319 NUP98P52948 1817 aa17.94■□□□□ 0.46
POLR2J3-204ENST00000486319 ATP5J2-PTCD1G3V325 749 aa17.94■□□□□ 0.46
POLR2J3-204ENST00000486319 SEC24BO95487 1268 aa17.94■□□□□ 0.46
POLR2J3-204ENST00000486319 IPO9Q96P70 1041 aaKnown RBP17.94■□□□□ 0.46
POLR2J3-204ENST00000486319 CHD4Q14839 1912 aa17.94■□□□□ 0.46
POLR2J3-204ENST00000486319 EIF5BO60841 1220 aaKnown RBP17.93■□□□□ 0.46
POLR2J3-204ENST00000486319 ERC1Q8IUD2 1116 aa17.93■□□□□ 0.46
POLR2J3-204ENST00000486319 RHPN1Q8TCX5 695 aa17.93■□□□□ 0.46
POLR2J3-204ENST00000486319 DDRGK1Q96HY6 314 aa17.93■□□□□ 0.46
POLR2J3-204ENST00000486319 ZNF219Q9P2Y4 722 aaPredicted RBP17.93■□□□□ 0.46
POLR2J3-204ENST00000486319 TRMT112Q9UI30 125 aaKnown RBP17.93■□□□□ 0.46
POLR2J3-204ENST00000486319 ABCC12Q96J65 1359 aa17.93■□□□□ 0.46
POLR2J3-204ENST00000486319 BRCA1P38398 1863 aaKnown RBP17.93■□□□□ 0.46
POLR2J3-204ENST00000486319 H7C1W4 665 aa17.93■□□□□ 0.46
POLR2J3-204ENST00000486319 C21orf2O43822 256 aa17.93■□□□□ 0.46
POLR2J3-204ENST00000486319 PRPF40BQ6NWY9 871 aaKnown RBP17.93■□□□□ 0.46
POLR2J3-204ENST00000486319 OTUD7AQ8TE49 926 aaPredicted RBP17.93■□□□□ 0.46
POLR2J3-204ENST00000486319 BCL11AQ9H165 835 aa17.93■□□□□ 0.46
POLR2J3-204ENST00000486319 SALL3Q9BXA9 1300 aa17.92■□□□□ 0.46
POLR2J3-204ENST00000486319 ANKRD31Q8N7Z5 1873 aa17.92■□□□□ 0.46
POLR2J3-204ENST00000486319 GSPT1P15170 499 aaKnown RBP17.92■□□□□ 0.46
POLR2J3-204ENST00000486319 PDE1AP54750 535 aa17.92■□□□□ 0.46
POLR2J3-204ENST00000486319 CRY2Q49AN0 593 aa17.92■□□□□ 0.46
POLR2J3-204ENST00000486319 UBE3BQ7Z3V4 1068 aa17.92■□□□□ 0.46
POLR2J3-204ENST00000486319 NLRP3Q96P20 1036 aa17.92■□□□□ 0.46
POLR2J3-204ENST00000486319 ISCA1Q9BUE6 129 aa17.92■□□□□ 0.46
POLR2J3-204ENST00000486319 CDC45O75419 566 aa17.91■□□□□ 0.46
POLR2J3-204ENST00000486319 MX1P20591 662 aa17.91■□□□□ 0.46
POLR2J3-204ENST00000486319 ALDH1B1P30837 517 aa17.91■□□□□ 0.46
POLR2J3-204ENST00000486319 CASP7P55210 303 aa17.91■□□□□ 0.46
POLR2J3-204ENST00000486319 AOX1Q06278 1338 aa17.91■□□□□ 0.46
POLR2J3-204ENST00000486319 TRIM28Q13263 835 aaKnown RBP17.91■□□□□ 0.46
POLR2J3-204ENST00000486319 OS9Q13438 667 aaPredicted RBP17.91■□□□□ 0.46
POLR2J3-204ENST00000486319 RABL6Q3YEC7 729 aaPredicted RBP17.91■□□□□ 0.46
POLR2J3-204ENST00000486319 SLC10A5Q5PT55 438 aa17.91■□□□□ 0.46
POLR2J3-204ENST00000486319 SH3TC1Q8TE82 1336 aa17.91■□□□□ 0.46
POLR2J3-204ENST00000486319 RPGRQ92834 1020 aaKnown RBP17.91■□□□□ 0.46
POLR2J3-204ENST00000486319 STAP2Q9UGK3 403 aa17.9■□□□□ 0.46
POLR2J3-204ENST00000486319 AK9Q5TCS8 1911 aa17.9■□□□□ 0.46
POLR2J3-204ENST00000486319 C9orf131Q5VYM1 1079 aa17.89■□□□□ 0.45
POLR2J3-204ENST00000486319 SYNE4Q8N205 404 aa17.89■□□□□ 0.45
POLR2J3-204ENST00000486319 HCLS1P14317 486 aaPredicted RBP17.88■□□□□ 0.45
POLR2J3-204ENST00000486319 G3BP1Q13283 466 aaKnown RBP eCLIP17.88■□□□□ 0.45
POLR2J3-204ENST00000486319 EPHA10Q5JZY3 1008 aa17.88■□□□□ 0.45
POLR2J3-204ENST00000486319 SOGA3Q5TF21 947 aa17.88■□□□□ 0.45
POLR2J3-204ENST00000486319 RBM17Q96I25 401 aaKnown RBP17.88■□□□□ 0.45
POLR2J3-204ENST00000486319 IL1RAPL2Q9NP60 686 aa17.88■□□□□ 0.45
POLR2J3-204ENST00000486319 RIC1Q4ADV7 1423 aa17.88■□□□□ 0.45
POLR2J3-204ENST00000486319 HOXA10P31260 410 aaPredicted RBP17.88■□□□□ 0.45
POLR2J3-204ENST00000486319 RASSF7Q02833 373 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms