RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 GJA3Q9Y6H8 435 aa11.43□□□□□ -0.58
XRN1-212ENST00000486211 CAMTA2O94983 1202 aa11.42□□□□□ -0.58
XRN1-212ENST00000486211 NPR1P16066 1061 aa11.42□□□□□ -0.58
XRN1-212ENST00000486211 NBPF15Q8N660 670 aa11.42□□□□□ -0.58
XRN1-212ENST00000486211 SETDB2Q96T68 719 aa11.42□□□□□ -0.58
XRN1-212ENST00000486211 SAGE1Q9NXZ1 904 aa11.42□□□□□ -0.58
XRN1-212ENST00000486211 EIF6P56537 245 aaKnown RBP11.41□□□□□ -0.58
XRN1-212ENST00000486211 TMEM92Q6UXU6 159 aa11.41□□□□□ -0.58
XRN1-212ENST00000486211 JDP2Q8WYK2 163 aa11.41□□□□□ -0.58
XRN1-212ENST00000486211 PSMD1Q99460 953 aa11.41□□□□□ -0.58
XRN1-212ENST00000486211 GLIS2Q9BZE0 524 aaPredicted RBP11.41□□□□□ -0.58
XRN1-212ENST00000486211 HPS5Q9UPZ3 1129 aa11.41□□□□□ -0.58
XRN1-212ENST00000486211 FAM155AB1AL88 458 aaPredicted RBP11.4□□□□□ -0.58
XRN1-212ENST00000486211 STARD3NLO95772 234 aa11.4□□□□□ -0.58
XRN1-212ENST00000486211 FXR1P51114 621 aaKnown RBP eCLIP11.4□□□□□ -0.58
XRN1-212ENST00000486211 AKAP4Q5JQC9 854 aa11.4□□□□□ -0.58
XRN1-212ENST00000486211 CTU1Q7Z7A3 348 aaKnown RBP11.4□□□□□ -0.58
XRN1-212ENST00000486211 PGAP2Q9UHJ9 254 aa11.4□□□□□ -0.58
XRN1-212ENST00000486211 NPHP1O15259 732 aa11.39□□□□□ -0.59
XRN1-212ENST00000486211 RNMTO43148 476 aaKnown RBP11.39□□□□□ -0.59
XRN1-212ENST00000486211 ADARB2Q9NS39 739 aaKnown RBP11.39□□□□□ -0.59
XRN1-212ENST00000486211 IL6STP40189 918 aaPredicted RBP11.38□□□□□ -0.59
XRN1-212ENST00000486211 TNNT2P45379 298 aaPredicted RBP11.38□□□□□ -0.59
XRN1-212ENST00000486211 RNF186Q9NXI6 227 aa11.38□□□□□ -0.59
XRN1-212ENST00000486211 GPRC5DQ9NZD1 345 aa11.38□□□□□ -0.59
XRN1-212ENST00000486211 TRPA1O75762 1119 aa11.37□□□□□ -0.59
XRN1-212ENST00000486211 SULT6B1Q6IMI4 303 aa11.37□□□□□ -0.59
XRN1-212ENST00000486211 ZNF408Q9H9D4 720 aa11.37□□□□□ -0.59
XRN1-212ENST00000486211 ZNF330Q9Y3S2 320 aaPredicted RBP11.37□□□□□ -0.59
XRN1-212ENST00000486211 STK24Q9Y6E0 443 aa11.37□□□□□ -0.59
XRN1-212ENST00000486211 RGL2O15211 777 aa11.36□□□□□ -0.59
XRN1-212ENST00000486211 HUNKP57058 714 aa11.36□□□□□ -0.59
XRN1-212ENST00000486211 NBPF5PQ86XG9 351 aaPredicted RBP11.36□□□□□ -0.59
XRN1-212ENST00000486211 ZNF496Q96IT1 587 aaPredicted RBP11.36□□□□□ -0.59
XRN1-212ENST00000486211 ZSWIM6Q9HCJ5 1215 aa11.36□□□□□ -0.59
XRN1-212ENST00000486211 HEG1Q9ULI3 1381 aa11.36□□□□□ -0.59
XRN1-212ENST00000486211 STK25O00506 426 aa11.35□□□□□ -0.59
XRN1-212ENST00000486211 ALDH1B1P30837 517 aa11.35□□□□□ -0.59
XRN1-212ENST00000486211 HIRAP54198 1017 aaPredicted RBP11.35□□□□□ -0.59
XRN1-212ENST00000486211 KIF23Q02241 960 aaPredicted RBP11.35□□□□□ -0.59
XRN1-212ENST00000486211 CDCA8Q53HL2 280 aa11.35□□□□□ -0.59
XRN1-212ENST00000486211 SLC51AQ86UW1 340 aa11.35□□□□□ -0.59
XRN1-212ENST00000486211 A1BGP04217 495 aa11.34□□□□□ -0.59
XRN1-212ENST00000486211 RGMBQ6NW40 437 aa11.34□□□□□ -0.59
XRN1-212ENST00000486211 DLK2Q6UY11 383 aa11.34□□□□□ -0.59
XRN1-212ENST00000486211 DZIP3Q86Y13 1208 aaKnown RBP11.34□□□□□ -0.59
XRN1-212ENST00000486211 LARGE2Q8N3Y3 721 aa11.34□□□□□ -0.59
XRN1-212ENST00000486211 ZC3H15Q8WU90 426 aaKnown RBP11.34□□□□□ -0.59
XRN1-212ENST00000486211 AKAP11Q9UKA4 1901 aa11.33□□□□□ -0.6
XRN1-212ENST00000486211 NPC1L1Q9UHC9 1359 aa11.33□□□□□ -0.6
XRN1-212ENST00000486211 PKN2Q16513 984 aaKnown RBP11.33□□□□□ -0.6
XRN1-212ENST00000486211 CRY2Q49AN0 593 aa11.33□□□□□ -0.6
XRN1-212ENST00000486211 CC2D2BQ6DHV5 1058 aa11.33□□□□□ -0.6
XRN1-212ENST00000486211 CLEC4GQ6UXB4 293 aa11.33□□□□□ -0.6
XRN1-212ENST00000486211 CDC37L1Q7L3B6 337 aa11.33□□□□□ -0.6
XRN1-212ENST00000486211 FBXO22Q8NEZ5 403 aa11.33□□□□□ -0.6
XRN1-212ENST00000486211 TRPM4Q8TD43 1214 aa11.33□□□□□ -0.6
XRN1-212ENST00000486211 CSRNP1Q96S65 589 aa11.33□□□□□ -0.6
XRN1-212ENST00000486211 TEX13AQ9BXU3 409 aaPredicted RBP11.33□□□□□ -0.6
XRN1-212ENST00000486211 DLL1O00548 723 aa11.32□□□□□ -0.6
XRN1-212ENST00000486211 IL13P35225 146 aa11.32□□□□□ -0.6
XRN1-212ENST00000486211 GMPSP49915 693 aaPredicted RBP11.32□□□□□ -0.6
XRN1-212ENST00000486211 CXCL9Q07325 125 aa11.32□□□□□ -0.6
XRN1-212ENST00000486211 VARS2Q5ST30 1063 aaKnown RBP11.32□□□□□ -0.6
XRN1-212ENST00000486211 NIM1KQ8IY84 436 aa11.32□□□□□ -0.6
XRN1-212ENST00000486211 TTC5Q8N0Z6 440 aa11.32□□□□□ -0.6
XRN1-212ENST00000486211 CCDC102AQ96A19 550 aa11.32□□□□□ -0.6
XRN1-212ENST00000486211 MKI67P46013 3256 aaKnown RBP11.32□□□□□ -0.6
XRN1-212ENST00000486211 GPR153Q6NV75 609 aa11.31□□□□□ -0.6
XRN1-212ENST00000486211 ZNF790Q6PG37 636 aa11.31□□□□□ -0.6
XRN1-212ENST00000486211 TPTE2Q6XPS3 522 aa11.31□□□□□ -0.6
XRN1-212ENST00000486211 USP48Q86UV5 1035 aa11.31□□□□□ -0.6
XRN1-212ENST00000486211 CDHR2Q9BYE9 1310 aa11.31□□□□□ -0.6
XRN1-212ENST00000486211 ABCC12Q96J65 1359 aa11.3□□□□□ -0.6
XRN1-212ENST00000486211 RIC1Q4ADV7 1423 aa11.3□□□□□ -0.6
XRN1-212ENST00000486211 SLC10A3P09131 477 aa11.3□□□□□ -0.6
XRN1-212ENST00000486211 MTHFSDQ2M296 383 aaKnown RBP11.3□□□□□ -0.6
XRN1-212ENST00000486211 GRIPAP1Q4V328 841 aa11.3□□□□□ -0.6
XRN1-212ENST00000486211 GBA2Q9HCG7 927 aaPredicted RBP11.3□□□□□ -0.6
XRN1-212ENST00000486211 SIPA1L3O60292 1781 aaPredicted RBP11.3□□□□□ -0.6
XRN1-212ENST00000486211 SHTN1A0MZ66 631 aa11.29□□□□□ -0.6
XRN1-212ENST00000486211 PPIP5K2O43314 1243 aa11.29□□□□□ -0.6
XRN1-212ENST00000486211 HOXA10P31260 410 aaPredicted RBP11.29□□□□□ -0.6
XRN1-212ENST00000486211 PIP4K2AP48426 406 aaPredicted RBP11.29□□□□□ -0.6
XRN1-212ENST00000486211 ZNF157P51786 506 aaPredicted RBP11.29□□□□□ -0.6
XRN1-212ENST00000486211 AOC3Q16853 763 aa11.29□□□□□ -0.6
XRN1-212ENST00000486211 NIP7Q9Y221 180 aaKnown RBP eCLIP11.29□□□□□ -0.6
XRN1-212ENST00000486211 FAM177BA6PVY3 158 aa11.28□□□□□ -0.6
XRN1-212ENST00000486211 FBXO46Q6PJ61 603 aaPredicted RBP11.28□□□□□ -0.6
XRN1-212ENST00000486211 NPM2Q86SE8 214 aaKnown RBP11.28□□□□□ -0.6
XRN1-212ENST00000486211 ZNF296Q8WUU4 475 aaPredicted RBP11.28□□□□□ -0.6
XRN1-212ENST00000486211 MFRPQ9BY79 579 aa11.28□□□□□ -0.6
XRN1-212ENST00000486211 ZNRF3Q9ULT6 936 aa11.28□□□□□ -0.6
XRN1-212ENST00000486211 ZNF652Q9Y2D9 606 aa11.28□□□□□ -0.6
XRN1-212ENST00000486211 KIF7Q2M1P5 1343 aa11.28□□□□□ -0.6
XRN1-212ENST00000486211 C2orf69Q8N8R5 385 aa11.27□□□□□ -0.61
XRN1-212ENST00000486211 VPS33BQ9H267 617 aa11.27□□□□□ -0.61
XRN1-212ENST00000486211 SZT2Q5T011 3432 aa11.26□□□□□ -0.61
XRN1-212ENST00000486211 IL17REQ8NFR9 667 aa11.26□□□□□ -0.61
XRN1-212ENST00000486211 FMNL2Q96PY5 1086 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms