RNA–Protein interactions for RNA: ENST00000486028.1

HMG20B-211, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-211ENST00000486028 RNF181Q9P0P0 153 aa15.81■□□□□ 0.12
HMG20B-211ENST00000486028 ABCC4O15439 1325 aa15.8■□□□□ 0.12
HMG20B-211ENST00000486028 CDHR2Q9BYE9 1310 aa15.8■□□□□ 0.12
HMG20B-211ENST00000486028 LTBP3Q9NS15 1303 aa15.8■□□□□ 0.12
HMG20B-211ENST00000486028 PPEF1O14829 653 aaPredicted RBP15.8■□□□□ 0.12
HMG20B-211ENST00000486028 GRAPQ13588 217 aa15.8■□□□□ 0.12
HMG20B-211ENST00000486028 BEND3Q5T5X7 828 aa15.8■□□□□ 0.12
HMG20B-211ENST00000486028 SLC4A10Q6U841 1118 aa15.8■□□□□ 0.12
HMG20B-211ENST00000486028 GRAPLQ8TC17 118 aaPredicted RBP15.8■□□□□ 0.12
HMG20B-211ENST00000486028 CCDC152Q4G0S7 254 aa15.79■□□□□ 0.12
HMG20B-211ENST00000486028 OLFM4Q6UX06 510 aa15.79■□□□□ 0.12
HMG20B-211ENST00000486028 UBE3BQ7Z3V4 1068 aa15.79■□□□□ 0.12
HMG20B-211ENST00000486028 ATP6V0A2Q9Y487 856 aa15.79■□□□□ 0.12
HMG20B-211ENST00000486028 ALDH1L1O75891 902 aa15.78■□□□□ 0.12
HMG20B-211ENST00000486028 RARSP54136 660 aaKnown RBP15.78■□□□□ 0.12
HMG20B-211ENST00000486028 FKBP4Q02790 459 aaKnown RBP eCLIP15.78■□□□□ 0.12
HMG20B-211ENST00000486028 TMC4Q7Z404 712 aa15.78■□□□□ 0.12
HMG20B-211ENST00000486028 SRCIN1Q9C0H9 1055 aa15.78■□□□□ 0.12
HMG20B-211ENST00000486028 BRPF1P55201 1214 aaPredicted RBP15.77■□□□□ 0.12
HMG20B-211ENST00000486028 SP8Q8IXZ3 490 aa15.77■□□□□ 0.12
HMG20B-211ENST00000486028 PRELPP51888 382 aa15.76■□□□□ 0.11
HMG20B-211ENST00000486028 CTSWP56202 376 aa15.76■□□□□ 0.11
HMG20B-211ENST00000486028 RPS8P62241 208 aaKnown RBP15.76■□□□□ 0.11
HMG20B-211ENST00000486028 C9orf78Q9NZ63 289 aaPredicted RBP15.76■□□□□ 0.11
HMG20B-211ENST00000486028 NOB1Q9ULX3 412 aaKnown RBP15.76■□□□□ 0.11
HMG20B-211ENST00000486028 ZC3H4Q9UPT8 1303 aaKnown RBP15.75■□□□□ 0.11
HMG20B-211ENST00000486028 GRM8O00222 908 aa15.75■□□□□ 0.11
HMG20B-211ENST00000486028 CASP7P55210 303 aa15.75■□□□□ 0.11
HMG20B-211ENST00000486028 TTLL11Q8NHH1 800 aa15.75■□□□□ 0.11
HMG20B-211ENST00000486028 PSMD1Q99460 953 aa15.75■□□□□ 0.11
HMG20B-211ENST00000486028 PLA2G12BQ9BX93 195 aa15.75■□□□□ 0.11
HMG20B-211ENST00000486028 ZNF277Q9NRM2 450 aaPredicted RBP15.75■□□□□ 0.11
HMG20B-211ENST00000486028 CACNA1SQ13698 1873 aa15.75■□□□□ 0.11
HMG20B-211ENST00000486028 DDX60Q8IY21 1712 aaKnown RBP15.74■□□□□ 0.11
HMG20B-211ENST00000486028 ZNF526Q8TF50 670 aaPredicted RBP15.74■□□□□ 0.11
HMG20B-211ENST00000486028 CELF1Q92879 486 aaKnown RBP15.74■□□□□ 0.11
HMG20B-211ENST00000486028 CCDC85AQ96PX6 553 aaPredicted RBP15.74■□□□□ 0.11
HMG20B-211ENST00000486028 API5Q9BZZ5 524 aaKnown RBP15.74■□□□□ 0.11
HMG20B-211ENST00000486028 GPBP1L1Q9HC44 474 aaPredicted RBP15.74■□□□□ 0.11
HMG20B-211ENST00000486028 LAMB2P55268 1798 aa15.73■□□□□ 0.11
HMG20B-211ENST00000486028 IPO8O15397 1037 aaKnown RBP15.73■□□□□ 0.11
HMG20B-211ENST00000486028 DPP8Q6V1X1 898 aaPredicted RBP15.73■□□□□ 0.11
HMG20B-211ENST00000486028 MPNDQ8N594 471 aa15.73■□□□□ 0.11
HMG20B-211ENST00000486028 SUPT20HQ8NEM7 779 aa15.73■□□□□ 0.11
HMG20B-211ENST00000486028 CDC5LQ99459 802 aaKnown RBP15.73■□□□□ 0.11
HMG20B-211ENST00000486028 SEC31BQ9NQW1 1179 aa15.73■□□□□ 0.11
HMG20B-211ENST00000486028 SBF1O95248 1867 aa15.73■□□□□ 0.11
HMG20B-211ENST00000486028 FER1L6Q2WGJ9 1857 aa15.73■□□□□ 0.11
HMG20B-211ENST00000486028 KIF16BQ96L93 1317 aa15.72■□□□□ 0.11
HMG20B-211ENST00000486028 IARSP41252 1262 aaKnown RBP15.72■□□□□ 0.11
HMG20B-211ENST00000486028 ANKRD18AQ8IVF6 992 aa15.72■□□□□ 0.11
HMG20B-211ENST00000486028 ARHGAP45Q92619 1136 aa15.72■□□□□ 0.11
HMG20B-211ENST00000486028 GREM2Q9H772 168 aa15.72■□□□□ 0.11
HMG20B-211ENST00000486028 KDM2BQ8NHM5 1336 aa15.71■□□□□ 0.11
HMG20B-211ENST00000486028 CSF1RP07333 972 aa15.71■□□□□ 0.11
HMG20B-211ENST00000486028 CCT4P50991 539 aaKnown RBP15.71■□□□□ 0.11
HMG20B-211ENST00000486028 DPY19L2Q6NUT2 758 aa15.71■□□□□ 0.11
HMG20B-211ENST00000486028 VPS33BQ9H267 617 aa15.71■□□□□ 0.11
HMG20B-211ENST00000486028 RTL9Q8NET4 1388 aa15.71■□□□□ 0.11
HMG20B-211ENST00000486028 SNED1Q8TER0 1413 aa15.7■□□□□ 0.1
HMG20B-211ENST00000486028 BCAR3O75815 825 aa15.7■□□□□ 0.1
HMG20B-211ENST00000486028 FOXO4P98177 505 aa15.7■□□□□ 0.1
HMG20B-211ENST00000486028 SLC51AQ86UW1 340 aa15.7■□□□□ 0.1
HMG20B-211ENST00000486028 JDP2Q8WYK2 163 aa15.7■□□□□ 0.1
HMG20B-211ENST00000486028 RTFDC1Q9BY42 306 aaPredicted RBP15.7■□□□□ 0.1
HMG20B-211ENST00000486028 NSFL1CQ9UNZ2 370 aaKnown RBP15.7■□□□□ 0.1
HMG20B-211ENST00000486028 UTYO14607 1347 aa15.69■□□□□ 0.1
HMG20B-211ENST00000486028 GLTPD2A6NH11 291 aa15.69■□□□□ 0.1
HMG20B-211ENST00000486028 ITGA6P23229 1130 aa15.69■□□□□ 0.1
HMG20B-211ENST00000486028 SAMD1Q6SPF0 538 aaPredicted RBP15.69■□□□□ 0.1
HMG20B-211ENST00000486028 LARGE2Q8N3Y3 721 aa15.69■□□□□ 0.1
HMG20B-211ENST00000486028 FRAT1Q92837 279 aaPredicted RBP15.69■□□□□ 0.1
HMG20B-211ENST00000486028 ANKRD18BA2A2Z9 1011 aa15.68■□□□□ 0.1
HMG20B-211ENST00000486028 PPIP5K2O43314 1243 aa15.68■□□□□ 0.1
HMG20B-211ENST00000486028 NBPF7P0C2Y1 421 aaPredicted RBP15.68■□□□□ 0.1
HMG20B-211ENST00000486028 IGHMBP2P38935 993 aaKnown RBP15.68■□□□□ 0.1
HMG20B-211ENST00000486028 GPSM2P81274 684 aa15.68■□□□□ 0.1
HMG20B-211ENST00000486028 PLCB2Q00722 1185 aa15.68■□□□□ 0.1
HMG20B-211ENST00000486028 IFIT5Q13325 482 aaKnown RBP15.68■□□□□ 0.1
HMG20B-211ENST00000486028 FAM161AQ3B820 660 aa15.68■□□□□ 0.1
HMG20B-211ENST00000486028 LMBR1LQ6UX01 489 aa15.68■□□□□ 0.1
HMG20B-211ENST00000486028 USP44Q9H0E7 712 aa15.68■□□□□ 0.1
HMG20B-211ENST00000486028 BSDC1Q9NW68 430 aaPredicted RBP15.68■□□□□ 0.1
HMG20B-211ENST00000486028 CHMP3Q9Y3E7 222 aa15.68■□□□□ 0.1
HMG20B-211ENST00000486028 TAF1P21675 1872 aa15.67■□□□□ 0.1
HMG20B-211ENST00000486028 C6orf229H3BNL8 230 aa15.67■□□□□ 0.1
HMG20B-211ENST00000486028 CCDC57Q2TAC2 916 aa15.67■□□□□ 0.1
HMG20B-211ENST00000486028 EPHA10Q5JZY3 1008 aa15.67■□□□□ 0.1
HMG20B-211ENST00000486028 ATF7IPQ6VMQ6 1270 aa15.67■□□□□ 0.1
HMG20B-211ENST00000486028 SUCLG2Q96I99 432 aa15.67■□□□□ 0.1
HMG20B-211ENST00000486028 ANKIB1Q9P2G1 1089 aa15.67■□□□□ 0.1
HMG20B-211ENST00000486028 CCDC88AQ3V6T2 1871 aa15.67■□□□□ 0.1
HMG20B-211ENST00000486028 AOC3Q16853 763 aa15.66■□□□□ 0.1
HMG20B-211ENST00000486028 NIM1KQ8IY84 436 aa15.66■□□□□ 0.1
HMG20B-211ENST00000486028 MPHOSPH8Q99549 860 aa15.66■□□□□ 0.1
HMG20B-211ENST00000486028 PODXL2Q9NZ53 605 aa15.66■□□□□ 0.1
HMG20B-211ENST00000486028 HDAC5Q9UQL6 1122 aa15.66■□□□□ 0.1
HMG20B-211ENST00000486028 FZD9O00144 591 aa15.65■□□□□ 0.1
HMG20B-211ENST00000486028 EIF6P56537 245 aaKnown RBP15.65■□□□□ 0.1
HMG20B-211ENST00000486028 KIAA2012Q0VF49 1180 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms