RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 CCT4P50991 539 aaKnown RBP14.96□□□□□ -0.01
HPS4-214ENST00000485842 CTSWP56202 376 aa14.96□□□□□ -0.01
HPS4-214ENST00000485842 OLFM4Q6UX06 510 aa14.96□□□□□ -0.01
HPS4-214ENST00000485842 ATF7IPQ6VMQ6 1270 aa14.96□□□□□ -0.01
HPS4-214ENST00000485842 ARHGAP45Q92619 1136 aa14.96□□□□□ -0.01
HPS4-214ENST00000485842 RCAN3Q9UKA8 241 aa14.96□□□□□ -0.01
HPS4-214ENST00000485842 RASSF7Q02833 373 aa14.95□□□□□ -0.02
HPS4-214ENST00000485842 GRAPQ13588 217 aa14.95□□□□□ -0.02
HPS4-214ENST00000485842 CCDC152Q4G0S7 254 aa14.95□□□□□ -0.02
HPS4-214ENST00000485842 SLC51AQ86UW1 340 aa14.95□□□□□ -0.02
HPS4-214ENST00000485842 GRAPLQ8TC17 118 aaPredicted RBP14.95□□□□□ -0.02
HPS4-214ENST00000485842 COL4A1P02462 1669 aa14.95□□□□□ -0.02
HPS4-214ENST00000485842 SPEF2Q9C093 1822 aa14.94□□□□□ -0.02
HPS4-214ENST00000485842 NBPF7P0C2Y1 421 aaPredicted RBP14.94□□□□□ -0.02
HPS4-214ENST00000485842 CCDC93Q567U6 631 aa14.94□□□□□ -0.02
HPS4-214ENST00000485842 CELF1Q92879 486 aaKnown RBP14.94□□□□□ -0.02
HPS4-214ENST00000485842 PLA2G12BQ9BX93 195 aa14.94□□□□□ -0.02
HPS4-214ENST00000485842 SEC31BQ9NQW1 1179 aa14.94□□□□□ -0.02
HPS4-214ENST00000485842 FER1L6Q2WGJ9 1857 aa14.94□□□□□ -0.02
HPS4-214ENST00000485842 SOGA3Q5TF21 947 aa14.93□□□□□ -0.02
HPS4-214ENST00000485842 TTLL11Q8NHH1 800 aa14.93□□□□□ -0.02
HPS4-214ENST00000485842 C7orf43Q8WVR3 580 aa14.93□□□□□ -0.02
HPS4-214ENST00000485842 SUCLG2Q96I99 432 aa14.93□□□□□ -0.02
HPS4-214ENST00000485842 GREM2Q9H772 168 aa14.93□□□□□ -0.02
HPS4-214ENST00000485842 CHMP3Q9Y3E7 222 aa14.93□□□□□ -0.02
HPS4-214ENST00000485842 NFKBIEO00221 500 aa14.92□□□□□ -0.02
HPS4-214ENST00000485842 FAM161AQ3B820 660 aa14.92□□□□□ -0.02
HPS4-214ENST00000485842 EPHA10Q5JZY3 1008 aa14.92□□□□□ -0.02
HPS4-214ENST00000485842 FTSJ3Q8IY81 847 aaKnown RBP14.92□□□□□ -0.02
HPS4-214ENST00000485842 USP44Q9H0E7 712 aa14.92□□□□□ -0.02
HPS4-214ENST00000485842 UTYO14607 1347 aa14.92□□□□□ -0.02
HPS4-214ENST00000485842 CCDC88AQ3V6T2 1871 aa14.91□□□□□ -0.02
HPS4-214ENST00000485842 BBOX1O75936 387 aa14.91□□□□□ -0.02
HPS4-214ENST00000485842 FOXO4P98177 505 aa14.91□□□□□ -0.02
HPS4-214ENST00000485842 INTS3Q68E01 1043 aaKnown RBP14.91□□□□□ -0.02
HPS4-214ENST00000485842 TMX4Q9H1E5 349 aaPredicted RBP14.91□□□□□ -0.02
HPS4-214ENST00000485842 TAOK3Q9H2K8 898 aa14.91□□□□□ -0.02
HPS4-214ENST00000485842 ATP6V0A2Q9Y487 856 aa14.91□□□□□ -0.02
HPS4-214ENST00000485842 LRRC37AA6NMS7 1700 aa14.91□□□□□ -0.02
HPS4-214ENST00000485842 SBF1O95248 1867 aa14.91□□□□□ -0.02
HPS4-214ENST00000485842 RTL9Q8NET4 1388 aa14.9□□□□□ -0.02
HPS4-214ENST00000485842 UBTFL1P0CB47 393 aaPredicted RBP14.9□□□□□ -0.02
HPS4-214ENST00000485842 RPS8P62241 208 aaKnown RBP14.9□□□□□ -0.02
HPS4-214ENST00000485842 LMBR1LQ6UX01 489 aa14.9□□□□□ -0.02
HPS4-214ENST00000485842 ANKRD18AQ8IVF6 992 aa14.9□□□□□ -0.02
HPS4-214ENST00000485842 DZIP1LQ8IYY4 767 aaKnown RBP14.9□□□□□ -0.02
HPS4-214ENST00000485842 TMEM57Q8N5G2 664 aa14.9□□□□□ -0.02
HPS4-214ENST00000485842 CDC5LQ99459 802 aaKnown RBP14.9□□□□□ -0.02
HPS4-214ENST00000485842 GOLGB1Q14789 3259 aaKnown RBP14.89□□□□□ -0.03
HPS4-214ENST00000485842 PLIN1O60240 522 aa14.89□□□□□ -0.03
HPS4-214ENST00000485842 CSF1RP07333 972 aa14.89□□□□□ -0.03
HPS4-214ENST00000485842 ITGA6P23229 1130 aa14.89□□□□□ -0.03
HPS4-214ENST00000485842 YY1P25490 414 aa14.89□□□□□ -0.03
HPS4-214ENST00000485842 C9orf131Q5VYM1 1079 aa14.89□□□□□ -0.03
HPS4-214ENST00000485842 CC2D2BQ6DHV5 1058 aa14.89□□□□□ -0.03
HPS4-214ENST00000485842 TMC4Q7Z404 712 aa14.89□□□□□ -0.03
HPS4-214ENST00000485842 SP8Q8IXZ3 490 aa14.89□□□□□ -0.03
HPS4-214ENST00000485842 RTKN2Q8IZC4 609 aa14.89□□□□□ -0.03
HPS4-214ENST00000485842 MEIS3Q99687 375 aa14.89□□□□□ -0.03
HPS4-214ENST00000485842 BICC1Q9H694 974 aaKnown RBP14.89□□□□□ -0.03
HPS4-214ENST00000485842 RNF181Q9P0P0 153 aa14.89□□□□□ -0.03
HPS4-214ENST00000485842 LTBP3Q9NS15 1303 aa14.89□□□□□ -0.03
HPS4-214ENST00000485842 TIAM2Q8IVF5 1701 aa14.89□□□□□ -0.03
HPS4-214ENST00000485842 RLBP1P12271 317 aa14.88□□□□□ -0.03
HPS4-214ENST00000485842 FKBP4Q02790 459 aaKnown RBP eCLIP14.88□□□□□ -0.03
HPS4-214ENST00000485842 ITPRIPQ8IWB1 547 aa14.88□□□□□ -0.03
HPS4-214ENST00000485842 PANK1Q8TE04 598 aa14.88□□□□□ -0.03
HPS4-214ENST00000485842 KAZALD1Q96I82 304 aa14.88□□□□□ -0.03
HPS4-214ENST00000485842 SNED1Q8TER0 1413 aa14.88□□□□□ -0.03
HPS4-214ENST00000485842 ANKRD18BA2A2Z9 1011 aa14.87□□□□□ -0.03
HPS4-214ENST00000485842 LMNB1P20700 586 aa14.87□□□□□ -0.03
HPS4-214ENST00000485842 IGHMBP2P38935 993 aaKnown RBP14.87□□□□□ -0.03
HPS4-214ENST00000485842 PRELPP51888 382 aa14.87□□□□□ -0.03
HPS4-214ENST00000485842 IFIT5Q13325 482 aaKnown RBP14.87□□□□□ -0.03
HPS4-214ENST00000485842 DPP8Q6V1X1 898 aaPredicted RBP14.87□□□□□ -0.03
HPS4-214ENST00000485842 ANKRD44Q8N8A2 993 aa14.87□□□□□ -0.03
HPS4-214ENST00000485842 ZNF277Q9NRM2 450 aaPredicted RBP14.87□□□□□ -0.03
HPS4-214ENST00000485842 LRRFIP2Q9Y608 721 aaKnown RBP14.87□□□□□ -0.03
HPS4-214ENST00000485842 GNAI3P08754 354 aa14.86□□□□□ -0.03
HPS4-214ENST00000485842 MS4A1P11836 297 aa14.86□□□□□ -0.03
HPS4-214ENST00000485842 CCDC57Q2TAC2 916 aa14.86□□□□□ -0.03
HPS4-214ENST00000485842 TAF7LQ5H9L4 462 aa14.86□□□□□ -0.03
HPS4-214ENST00000485842 MPNDQ8N594 471 aa14.86□□□□□ -0.03
HPS4-214ENST00000485842 DICER1Q9UPY3 1922 aaKnown RBP14.86□□□□□ -0.03
HPS4-214ENST00000485842 DUOX1Q9NRD9 1551 aa14.85□□□□□ -0.03
HPS4-214ENST00000485842 GPSM2P81274 684 aa14.85□□□□□ -0.03
HPS4-214ENST00000485842 RABL6Q3YEC7 729 aaPredicted RBP14.85□□□□□ -0.03
HPS4-214ENST00000485842 GRIPAP1Q4V328 841 aa14.85□□□□□ -0.03
HPS4-214ENST00000485842 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.85□□□□□ -0.03
HPS4-214ENST00000485842 ZNF594Q96JF6 807 aaPredicted RBP14.85□□□□□ -0.03
HPS4-214ENST00000485842 PSMD1Q99460 953 aa14.85□□□□□ -0.03
HPS4-214ENST00000485842 MPHOSPH8Q99549 860 aa14.85□□□□□ -0.03
HPS4-214ENST00000485842 NSFL1CQ9UNZ2 370 aaKnown RBP14.85□□□□□ -0.03
HPS4-214ENST00000485842 LTBP1Q14766 1721 aa14.84□□□□□ -0.03
HPS4-214ENST00000485842 IARSP41252 1262 aaKnown RBP14.84□□□□□ -0.03
HPS4-214ENST00000485842 BSDC1Q9NW68 430 aaPredicted RBP14.84□□□□□ -0.03
HPS4-214ENST00000485842 ANKIB1Q9P2G1 1089 aa14.84□□□□□ -0.03
HPS4-214ENST00000485842 HDAC5Q9UQL6 1122 aa14.84□□□□□ -0.03
HPS4-214ENST00000485842 SUPT20HQ8NEM7 779 aa14.83□□□□□ -0.04
HPS4-214ENST00000485842 C6orf229H3BNL8 230 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms